RNA–Protein interactions for RNA: ENST00000517164.1

RNU6-1028P-201, Transcript of RNA, U6 small nuclear 1028, pseudogene, humanhuman

BASIC

Gene RNU6-1028P, Length 93 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1028P-201ENST00000517164 CCDC155Q8N6L0 562 aa8.45□□□□□ -1.06
RNU6-1028P-201ENST00000517164 ZIC5Q96T25 663 aa8.45□□□□□ -1.06
RNU6-1028P-201ENST00000517164 FKBP4Q02790 459 aaKnown RBP eCLIP8.44□□□□□ -1.06
RNU6-1028P-201ENST00000517164 C11orf91Q3C1V1 193 aa8.44□□□□□ -1.06
RNU6-1028P-201ENST00000517164 RIPOR1Q6ZS17 1223 aa8.44□□□□□ -1.06
RNU6-1028P-201ENST00000517164 HSH2DQ96JZ2 352 aa8.44□□□□□ -1.06
RNU6-1028P-201ENST00000517164 BCS1LQ9Y276 419 aa8.44□□□□□ -1.06
RNU6-1028P-201ENST00000517164 A0A1W2PNR3 127 aa8.43□□□□□ -1.06
RNU6-1028P-201ENST00000517164 MPSTP25325 297 aa8.43□□□□□ -1.06
RNU6-1028P-201ENST00000517164 SF3B2Q13435 895 aaKnown RBP8.43□□□□□ -1.06
RNU6-1028P-201ENST00000517164 GLYCTKQ8IVS8 523 aa8.43□□□□□ -1.06
RNU6-1028P-201ENST00000517164 ZNF280CQ8ND82 737 aa8.43□□□□□ -1.06
RNU6-1028P-201ENST00000517164 SUSD3Q96L08 255 aa8.43□□□□□ -1.06
RNU6-1028P-201ENST00000517164 CRISPLD1Q9H336 500 aa8.43□□□□□ -1.06
RNU6-1028P-201ENST00000517164 STIM2Q9P246 746 aa8.43□□□□□ -1.06
RNU6-1028P-201ENST00000517164 GPC6Q9Y625 555 aaPredicted RBP8.43□□□□□ -1.06
RNU6-1028P-201ENST00000517164 THBS1P07996 1170 aa8.42□□□□□ -1.06
RNU6-1028P-201ENST00000517164 LRRC69Q6ZNQ3 347 aa8.42□□□□□ -1.06
RNU6-1028P-201ENST00000517164 SND1Q7KZF4 910 aaKnown RBP eCLIP8.42□□□□□ -1.06
RNU6-1028P-201ENST00000517164 ETFBKMTQ8IXQ9 262 aa8.42□□□□□ -1.06
RNU6-1028P-201ENST00000517164 PGBD3Q8N328 593 aa8.42□□□□□ -1.06
RNU6-1028P-201ENST00000517164 IFT43Q96FT9 208 aa8.42□□□□□ -1.06
RNU6-1028P-201ENST00000517164 CUEDC1Q9NWM3 386 aaPredicted RBP8.42□□□□□ -1.06
RNU6-1028P-201ENST00000517164 ZBTB39O15060 712 aa8.41□□□□□ -1.06
RNU6-1028P-201ENST00000517164 BRD2P25440 801 aaKnown RBP8.41□□□□□ -1.06
RNU6-1028P-201ENST00000517164 ECM1Q16610 540 aa8.41□□□□□ -1.06
RNU6-1028P-201ENST00000517164 TGFBR3LH3BV60 316 aa8.4□□□□□ -1.06
RNU6-1028P-201ENST00000517164 NPR3P17342 541 aa8.4□□□□□ -1.06
RNU6-1028P-201ENST00000517164 ITGA6P23229 1130 aa8.4□□□□□ -1.06
RNU6-1028P-201ENST00000517164 NEUROD4Q9HD90 331 aa8.4□□□□□ -1.06
RNU6-1028P-201ENST00000517164 BIN2Q9UBW5 565 aaPredicted RBP8.4□□□□□ -1.06
RNU6-1028P-201ENST00000517164 GJA3Q9Y6H8 435 aa8.4□□□□□ -1.06
RNU6-1028P-201ENST00000517164 FAM13AO94988 1023 aa8.39□□□□□ -1.07
RNU6-1028P-201ENST00000517164 DBN1Q16643 649 aa8.39□□□□□ -1.07
RNU6-1028P-201ENST00000517164 HIF1AQ16665 826 aa8.39□□□□□ -1.07
RNU6-1028P-201ENST00000517164 EFHC2Q5JST6 749 aa8.39□□□□□ -1.07
RNU6-1028P-201ENST00000517164 TREML1Q86YW5 311 aa8.39□□□□□ -1.07
RNU6-1028P-201ENST00000517164 ABTB2Q8N961 1025 aa8.39□□□□□ -1.07
RNU6-1028P-201ENST00000517164 NUCKS1Q9H1E3 243 aaKnown RBP8.39□□□□□ -1.07
RNU6-1028P-201ENST00000517164 ANKIB1Q9P2G1 1089 aa8.39□□□□□ -1.07
RNU6-1028P-201ENST00000517164 PPFIA3O75145 1194 aa8.38□□□□□ -1.07
RNU6-1028P-201ENST00000517164 EIF1AXP47813 144 aaKnown RBP8.38□□□□□ -1.07
RNU6-1028P-201ENST00000517164 ARHGAP4P98171 946 aa8.38□□□□□ -1.07
RNU6-1028P-201ENST00000517164 IER5Q5VY09 327 aa8.38□□□□□ -1.07
RNU6-1028P-201ENST00000517164 NLRP8Q86W28 1048 aa8.38□□□□□ -1.07
RNU6-1028P-201ENST00000517164 ATCAYQ86WG3 371 aa8.38□□□□□ -1.07
RNU6-1028P-201ENST00000517164 TRIM22Q8IYM9 498 aa8.38□□□□□ -1.07
RNU6-1028P-201ENST00000517164 ZNF837Q96EG3 531 aaPredicted RBP8.38□□□□□ -1.07
RNU6-1028P-201ENST00000517164 PODXL2Q9NZ53 605 aa8.38□□□□□ -1.07
RNU6-1028P-201ENST00000517164 DMGDHQ9UI17 866 aaKnown RBP8.38□□□□□ -1.07
RNU6-1028P-201ENST00000517164 H7C1W4 665 aa8.37□□□□□ -1.07
RNU6-1028P-201ENST00000517164 MICAL2O94851 1124 aa8.37□□□□□ -1.07
RNU6-1028P-201ENST00000517164 UBAP2LQ14157 1087 aaKnown RBP8.37□□□□□ -1.07
RNU6-1028P-201ENST00000517164 LBRQ14739 615 aaKnown RBP8.37□□□□□ -1.07
RNU6-1028P-201ENST00000517164 NOM1Q5C9Z4 860 aaKnown RBP8.37□□□□□ -1.07
RNU6-1028P-201ENST00000517164 BTLAQ7Z6A9 289 aa8.37□□□□□ -1.07
RNU6-1028P-201ENST00000517164 ZCCHC2Q9C0B9 1178 aaKnown RBP8.37□□□□□ -1.07
RNU6-1028P-201ENST00000517164 ZAP70P43403 619 aa8.36□□□□□ -1.07
RNU6-1028P-201ENST00000517164 IDH3AP50213 366 aa8.36□□□□□ -1.07
RNU6-1028P-201ENST00000517164 TYRO3Q06418 890 aa8.36□□□□□ -1.07
RNU6-1028P-201ENST00000517164 TMCO4Q5TGY1 634 aa8.36□□□□□ -1.07
RNU6-1028P-201ENST00000517164 ZNF787Q6DD87 383 aa8.36□□□□□ -1.07
RNU6-1028P-201ENST00000517164 CDC14CA4D256 554 aa8.35□□□□□ -1.07
RNU6-1028P-201ENST00000517164 OPLAHO14841 1288 aa8.35□□□□□ -1.07
RNU6-1028P-201ENST00000517164 VEGFBP49765 207 aa8.35□□□□□ -1.07
RNU6-1028P-201ENST00000517164 SAMD5Q5TGI4 173 aa8.35□□□□□ -1.07
RNU6-1028P-201ENST00000517164 CEP63Q96MT8 703 aa8.35□□□□□ -1.07
RNU6-1028P-201ENST00000517164 NXF1Q9UBU9 619 aaKnown RBP8.35□□□□□ -1.07
RNU6-1028P-201ENST00000517164 DCDC2BA2VCK2 349 aa8.34□□□□□ -1.07
RNU6-1028P-201ENST00000517164 ATXN7O15265 892 aaPredicted RBP8.34□□□□□ -1.07
RNU6-1028P-201ENST00000517164 FZD6O60353 706 aa8.34□□□□□ -1.07
RNU6-1028P-201ENST00000517164 AAMPQ13685 434 aa8.34□□□□□ -1.07
RNU6-1028P-201ENST00000517164 ALKBH2Q6NS38 261 aa8.34□□□□□ -1.07
RNU6-1028P-201ENST00000517164 FIGNL1Q6PIW4 674 aa8.34□□□□□ -1.07
RNU6-1028P-201ENST00000517164 GTPBP3Q969Y2 492 aaKnown RBP8.34□□□□□ -1.07
RNU6-1028P-201ENST00000517164 GMCL1Q96IK5 515 aa8.34□□□□□ -1.07
RNU6-1028P-201ENST00000517164 CCDC87Q9NVE4 849 aa8.34□□□□□ -1.07
RNU6-1028P-201ENST00000517164 USP20Q9Y2K6 914 aa8.34□□□□□ -1.07
RNU6-1028P-201ENST00000517164 GRNP28799 593 aaKnown RBP8.33□□□□□ -1.08
RNU6-1028P-201ENST00000517164 INPP5BP32019 993 aa8.33□□□□□ -1.08
RNU6-1028P-201ENST00000517164 ARSDP51689 593 aa8.33□□□□□ -1.08
RNU6-1028P-201ENST00000517164 CCDC27Q2M243 656 aa8.33□□□□□ -1.08
RNU6-1028P-201ENST00000517164 VWA5B2Q8N398 1253 aa8.33□□□□□ -1.08
RNU6-1028P-201ENST00000517164 GPR152Q8TDT2 470 aa8.33□□□□□ -1.08
RNU6-1028P-201ENST00000517164 BRD7Q9NPI1 651 aa8.33□□□□□ -1.08
RNU6-1028P-201ENST00000517164 HCN2Q9UL51 889 aa8.33□□□□□ -1.08
RNU6-1028P-201ENST00000517164 PCDHGC4Q9Y5F7 938 aa8.33□□□□□ -1.08
RNU6-1028P-201ENST00000517164 GPR25O00155 361 aa8.32□□□□□ -1.08
RNU6-1028P-201ENST00000517164 BNIP3LO60238 219 aa8.32□□□□□ -1.08
RNU6-1028P-201ENST00000517164 FAM157BP0CG42 384 aa8.32□□□□□ -1.08
RNU6-1028P-201ENST00000517164 DNM1Q05193 864 aaKnown RBP8.32□□□□□ -1.08
RNU6-1028P-201ENST00000517164 RGL4Q8IZJ4 473 aa8.32□□□□□ -1.08
RNU6-1028P-201ENST00000517164 EDEM1Q92611 657 aa8.32□□□□□ -1.08
RNU6-1028P-201ENST00000517164 ABHD17AQ96GS6 310 aa8.32□□□□□ -1.08
RNU6-1028P-201ENST00000517164 NDFIP2Q9NV92 336 aa8.32□□□□□ -1.08
RNU6-1028P-201ENST00000517164 KHNYNO15037 678 aaKnown RBP8.31□□□□□ -1.08
RNU6-1028P-201ENST00000517164 EFSO43281 561 aa8.31□□□□□ -1.08
RNU6-1028P-201ENST00000517164 MFAP1P55081 439 aaKnown RBP8.31□□□□□ -1.08
RNU6-1028P-201ENST00000517164 TNP2Q05952 138 aa8.31□□□□□ -1.08
RNU6-1028P-201ENST00000517164 NANOS1Q8WY41 292 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms