RNA–Protein interactions for RNA: ENST00000515854.5

ATP2C1-223, Transcript of ATPase secretory pathway Ca2+ transporting 1, human

TSL 4

Gene ATP2C1, Length 561 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2C1-223	ENST00000515854	IL2RB	P14784	551 aa		5.65	□□□□□ -1.5
ATP2C1-223	ENST00000515854	EVA1C	P58658	441 aa		5.65	□□□□□ -1.5
ATP2C1-223	ENST00000515854	ZNF790	Q6PG37	636 aa		5.65	□□□□□ -1.5
ATP2C1-223	ENST00000515854	SIRT2	Q8IXJ6	389 aa		5.65	□□□□□ -1.5
ATP2C1-223	ENST00000515854	RPAP2	Q8IXW5	612 aa	Predicted RBP	5.65	□□□□□ -1.5
ATP2C1-223	ENST00000515854	NFATC2IP	Q8NCF5	419 aa		5.65	□□□□□ -1.5
ATP2C1-223	ENST00000515854	PCDH11X	Q9BZA7	1347 aa		5.65	□□□□□ -1.51
ATP2C1-223	ENST00000515854	PCDH11Y	Q9BZA8	1340 aa		5.65	□□□□□ -1.51
ATP2C1-223	ENST00000515854	PARP4	Q9UKK3	1724 aa	Known RBP	5.65	□□□□□ -1.51
ATP2C1-223	ENST00000515854	COL14A1	Q05707	1796 aa	Known RBP	5.65	□□□□□ -1.51
ATP2C1-223	ENST00000515854	PXDNL	A1KZ92	1463 aa		5.64	□□□□□ -1.51
ATP2C1-223	ENST00000515854	COL16A1	Q07092	1604 aa	Predicted RBP	5.64	□□□□□ -1.51
ATP2C1-223	ENST00000515854	ERVV-2	B6SEH9	535 aa		5.64	□□□□□ -1.51
ATP2C1-223	ENST00000515854		F6X3S4	739 aa		5.64	□□□□□ -1.51
ATP2C1-223	ENST00000515854	TOM1	O60784	492 aa		5.64	□□□□□ -1.51
ATP2C1-223	ENST00000515854	EIF2S2	P20042	333 aa	Known RBP	5.64	□□□□□ -1.51
ATP2C1-223	ENST00000515854	RGS3	P49796	1198 aa		5.64	□□□□□ -1.51
ATP2C1-223	ENST00000515854	NUCB1	Q02818	461 aa		5.64	□□□□□ -1.51
ATP2C1-223	ENST00000515854	FKBP5	Q13451	457 aa	Predicted RBP	5.64	□□□□□ -1.51
ATP2C1-223	ENST00000515854	LAPTM4A	Q15012	233 aa		5.64	□□□□□ -1.51
ATP2C1-223	ENST00000515854	FAM161A	Q3B820	660 aa		5.64	□□□□□ -1.51
ATP2C1-223	ENST00000515854	ANKRD44	Q8N8A2	993 aa		5.64	□□□□□ -1.51
ATP2C1-223	ENST00000515854	NECTIN2	Q92692	538 aa		5.64	□□□□□ -1.51
ATP2C1-223	ENST00000515854	GCC1	Q96CN9	775 aa		5.64	□□□□□ -1.51
ATP2C1-223	ENST00000515854	C1orf115	Q9H7X2	142 aa		5.64	□□□□□ -1.51
ATP2C1-223	ENST00000515854	PHAX	Q9H814	394 aa	Known RBP	5.64	□□□□□ -1.51
ATP2C1-223	ENST00000515854	STRN4	Q9NRL3	753 aa		5.64	□□□□□ -1.51
ATP2C1-223	ENST00000515854	BTG4	Q9NY30	223 aa		5.64	□□□□□ -1.51
ATP2C1-223	ENST00000515854	CHPF2	Q9P2E5	772 aa		5.64	□□□□□ -1.51
ATP2C1-223	ENST00000515854	DBF4	Q9UBU7	674 aa	Predicted RBP	5.64	□□□□□ -1.51
ATP2C1-223	ENST00000515854	SCN11A	Q9UI33	1791 aa		5.64	□□□□□ -1.51
ATP2C1-223	ENST00000515854	DISP2	A7MBM2	1401 aa		5.64	□□□□□ -1.51
ATP2C1-223	ENST00000515854	CABP4	P57796	275 aa		5.63	□□□□□ -1.51
ATP2C1-223	ENST00000515854	SLC39A6	Q13433	755 aa		5.63	□□□□□ -1.51
ATP2C1-223	ENST00000515854	PDIA6	Q15084	440 aa		5.63	□□□□□ -1.51
ATP2C1-223	ENST00000515854	C8orf34	Q49A92	452 aa		5.63	□□□□□ -1.51
ATP2C1-223	ENST00000515854	CEP85	Q6P2H3	762 aa		5.63	□□□□□ -1.51
ATP2C1-223	ENST00000515854	SLC4A10	Q6U841	1118 aa		5.63	□□□□□ -1.51
ATP2C1-223	ENST00000515854	MEIS3	Q99687	375 aa		5.63	□□□□□ -1.51
ATP2C1-223	ENST00000515854	DCTPP1	Q9H773	170 aa		5.63	□□□□□ -1.51
ATP2C1-223	ENST00000515854	DDX21	Q9NR30	783 aa	Known RBP eCLIP	5.63	□□□□□ -1.51
ATP2C1-223	ENST00000515854	RYDEN	Q9NUL5	291 aa	Known RBP	5.63	□□□□□ -1.51
ATP2C1-223	ENST00000515854	HYPK	Q9NX55	129 aa		5.63	□□□□□ -1.51
ATP2C1-223	ENST00000515854	ATP10D	Q9P241	1426 aa		5.63	□□□□□ -1.51
ATP2C1-223	ENST00000515854	PRAMEF22	A3QJZ6	481 aa		5.62	□□□□□ -1.51
ATP2C1-223	ENST00000515854	GNAI2	P04899	355 aa		5.62	□□□□□ -1.51
ATP2C1-223	ENST00000515854	GNAI3	P08754	354 aa		5.62	□□□□□ -1.51
ATP2C1-223	ENST00000515854	SNRPA1	P09661	255 aa	Known RBP	5.62	□□□□□ -1.51
ATP2C1-223	ENST00000515854	PRKCSH	P14314	528 aa	Predicted RBP	5.62	□□□□□ -1.51
ATP2C1-223	ENST00000515854	BEND3	Q5T5X7	828 aa		5.62	□□□□□ -1.51
ATP2C1-223	ENST00000515854	KSR2	Q6VAB6	950 aa		5.62	□□□□□ -1.51
ATP2C1-223	ENST00000515854	CHD1L	Q86WJ1	897 aa		5.62	□□□□□ -1.51
ATP2C1-223	ENST00000515854	TTC5	Q8N0Z6	440 aa		5.62	□□□□□ -1.51
ATP2C1-223	ENST00000515854	DNAAF4	Q8WXU2	420 aa		5.62	□□□□□ -1.51
ATP2C1-223	ENST00000515854	ZNF496	Q96IT1	587 aa	Predicted RBP	5.62	□□□□□ -1.51
ATP2C1-223	ENST00000515854	FMNL2	Q96PY5	1086 aa		5.62	□□□□□ -1.51
ATP2C1-223	ENST00000515854	SRCIN1	Q9C0H9	1055 aa		5.62	□□□□□ -1.51
ATP2C1-223	ENST00000515854	ADCY9	O60503	1353 aa		5.62	□□□□□ -1.51
ATP2C1-223	ENST00000515854	PHLPP1	O60346	1717 aa		5.62	□□□□□ -1.51
ATP2C1-223	ENST00000515854	VIRMA	Q69YN4	1812 aa	Known RBP	5.62	□□□□□ -1.51
ATP2C1-223	ENST00000515854	PI4KAP2	A4QPH2	592 aa		5.61	□□□□□ -1.51
ATP2C1-223	ENST00000515854	STK25	O00506	426 aa		5.61	□□□□□ -1.51
ATP2C1-223	ENST00000515854	ALDH1L1	O75891	902 aa		5.61	□□□□□ -1.51
ATP2C1-223	ENST00000515854	ANXA1	P04083	346 aa		5.61	□□□□□ -1.51
ATP2C1-223	ENST00000515854	GLI3	P10071	1580 aa		5.61	□□□□□ -1.51
ATP2C1-223	ENST00000515854	PIP4K2B	P78356	416 aa		5.61	□□□□□ -1.51
ATP2C1-223	ENST00000515854	ATP8B2	P98198	1209 aa		5.61	□□□□□ -1.51
ATP2C1-223	ENST00000515854	PROSER3	Q2NL68	480 aa		5.61	□□□□□ -1.51
ATP2C1-223	ENST00000515854	LRP10	Q7Z4F1	713 aa		5.61	□□□□□ -1.51
ATP2C1-223	ENST00000515854	N4BP2	Q86UW6	1770 aa	Predicted RBP	5.61	□□□□□ -1.51
ATP2C1-223	ENST00000515854	PI4KAP1	Q8N8J0	262 aa		5.61	□□□□□ -1.51
ATP2C1-223	ENST00000515854	DDX54	Q8TDD1	881 aa	Known RBP	5.61	□□□□□ -1.51
ATP2C1-223	ENST00000515854	CDCA7	Q9BWT1	371 aa	Predicted RBP	5.61	□□□□□ -1.51
ATP2C1-223	ENST00000515854	SHANK3	Q9BYB0	1731 aa		5.61	□□□□□ -1.51
ATP2C1-223	ENST00000515854	USP44	Q9H0E7	712 aa		5.61	□□□□□ -1.51
ATP2C1-223	ENST00000515854	IBTK	Q9P2D0	1353 aa	Predicted RBP	5.61	□□□□□ -1.51
ATP2C1-223	ENST00000515854	THRAP3	Q9Y2W1	955 aa	Known RBP	5.61	□□□□□ -1.51
ATP2C1-223	ENST00000515854	CACNA1F	O60840	1977 aa		5.6	□□□□□ -1.51
ATP2C1-223	ENST00000515854	PLCH1	Q4KWH8	1693 aa		5.6	□□□□□ -1.51
ATP2C1-223	ENST00000515854	SLIT2	O94813	1529 aa		5.6	□□□□□ -1.51
ATP2C1-223	ENST00000515854	KCP	Q6ZWJ8	1503 aa		5.6	□□□□□ -1.51
ATP2C1-223	ENST00000515854	TNS2	Q63HR2	1409 aa		5.6	□□□□□ -1.51
ATP2C1-223	ENST00000515854	ERBB4	Q15303	1308 aa		5.6	□□□□□ -1.51
ATP2C1-223	ENST00000515854	SPATA31A1	Q5TZJ5	1347 aa		5.6	□□□□□ -1.51
ATP2C1-223	ENST00000515854	UBAP1L	F5GYI3	381 aa		5.6	□□□□□ -1.51
ATP2C1-223	ENST00000515854	HMMR	O75330	724 aa		5.6	□□□□□ -1.51
ATP2C1-223	ENST00000515854	DDX58	O95786	925 aa	Known RBP	5.6	□□□□□ -1.51
ATP2C1-223	ENST00000515854	ANKRD45	Q5TZF3	282 aa		5.6	□□□□□ -1.51
ATP2C1-223	ENST00000515854	LNPK	Q9C0E8	428 aa		5.6	□□□□□ -1.51
ATP2C1-223	ENST00000515854	USP35	Q9P2H5	1018 aa		5.6	□□□□□ -1.51
ATP2C1-223	ENST00000515854	MAP3K2	Q9Y2U5	619 aa		5.6	□□□□□ -1.51
ATP2C1-223	ENST00000515854	USP16	Q9Y5T5	823 aa		5.6	□□□□□ -1.51
ATP2C1-223	ENST00000515854	C5	P01031	1676 aa		5.59	□□□□□ -1.51
ATP2C1-223	ENST00000515854	LRP6	O75581	1613 aa		5.59	□□□□□ -1.51
ATP2C1-223	ENST00000515854	PAPPA	Q13219	1627 aa		5.59	□□□□□ -1.51
ATP2C1-223	ENST00000515854	UTY	O14607	1347 aa		5.59	□□□□□ -1.51
ATP2C1-223	ENST00000515854	SPATA31A5	Q5VU36	1347 aa		5.59	□□□□□ -1.51
ATP2C1-223	ENST00000515854	SPATA31A7	Q8IWB4	1347 aa		5.59	□□□□□ -1.51
ATP2C1-223	ENST00000515854	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	5.59	□□□□□ -1.51
ATP2C1-223	ENST00000515854	EXOC5	O00471	708 aa		5.59	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms