RNA–Protein interactions for RNA: ENST00000515815.5

SDHA-219, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 704 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-219ENST00000515815 SETDB2Q96T68 719 aa15.8■□□□□ 0.12
SDHA-219ENST00000515815 GPBP1L1Q9HC44 474 aaPredicted RBP15.8■□□□□ 0.12
SDHA-219ENST00000515815 RRP7AQ9Y3A4 280 aaKnown RBP15.8■□□□□ 0.12
SDHA-219ENST00000515815 CACNA1FO60840 1977 aa15.8■□□□□ 0.12
SDHA-219ENST00000515815 NBPF26B4DH59 902 aa15.79■□□□□ 0.12
SDHA-219ENST00000515815 RGL2O15211 777 aa15.79■□□□□ 0.12
SDHA-219ENST00000515815 NBPF10Q6P3W6 841 aaKnown RBP15.79■□□□□ 0.12
SDHA-219ENST00000515815 KIF6Q6ZMV9 814 aa15.79■□□□□ 0.12
SDHA-219ENST00000515815 ARHGAP27Q6ZUM4 889 aa15.79■□□□□ 0.12
SDHA-219ENST00000515815 C2CD5Q86YS7 1000 aa15.79■□□□□ 0.12
SDHA-219ENST00000515815 NBPF15Q8N660 670 aa15.79■□□□□ 0.12
SDHA-219ENST00000515815 IBTKQ9P2D0 1353 aaPredicted RBP15.78■□□□□ 0.12
SDHA-219ENST00000515815 SPEF2Q9C093 1822 aa15.78■□□□□ 0.12
SDHA-219ENST00000515815 LRRC37AA6NMS7 1700 aa15.78■□□□□ 0.12
SDHA-219ENST00000515815 CLEC4GQ6UXB4 293 aa15.78■□□□□ 0.12
SDHA-219ENST00000515815 PDZRN3Q9UPQ7 1066 aa15.78■□□□□ 0.12
SDHA-219ENST00000515815 RIC1Q4ADV7 1423 aa15.77■□□□□ 0.12
SDHA-219ENST00000515815 H0YIN7 160 aa15.77■□□□□ 0.12
SDHA-219ENST00000515815 PDE6BP35913 854 aa15.77■□□□□ 0.12
SDHA-219ENST00000515815 NEUROD2Q15784 382 aa15.77■□□□□ 0.12
SDHA-219ENST00000515815 NBPF5PQ86XG9 351 aaPredicted RBP15.77■□□□□ 0.12
SDHA-219ENST00000515815 BABAM1Q9NWV8 329 aa15.77■□□□□ 0.12
SDHA-219ENST00000515815 NIP7Q9Y221 180 aaKnown RBP eCLIP15.76■□□□□ 0.11
SDHA-219ENST00000515815 MAP3K15Q6ZN16 1313 aa15.75■□□□□ 0.11
SDHA-219ENST00000515815 MYL6BP14649 208 aa15.75■□□□□ 0.11
SDHA-219ENST00000515815 C1QTNF8P60827 252 aa15.75■□□□□ 0.11
SDHA-219ENST00000515815 TTLL6Q8N841 843 aa15.75■□□□□ 0.11
SDHA-219ENST00000515815 BRIP1Q9BX63 1249 aa15.75■□□□□ 0.11
SDHA-219ENST00000515815 ADAMTS8Q9UP79 889 aa15.75■□□□□ 0.11
SDHA-219ENST00000515815 ABCC12Q96J65 1359 aa15.75■□□□□ 0.11
SDHA-219ENST00000515815 TAF1P21675 1872 aa15.74■□□□□ 0.11
SDHA-219ENST00000515815 SCN4AP35499 1836 aa15.74■□□□□ 0.11
SDHA-219ENST00000515815 RASSF7Q02833 373 aa15.74■□□□□ 0.11
SDHA-219ENST00000515815 CCDC24Q8N4L8 307 aa15.74■□□□□ 0.11
SDHA-219ENST00000515815 RNF181Q9P0P0 153 aa15.74■□□□□ 0.11
SDHA-219ENST00000515815 ZC3H4Q9UPT8 1303 aaKnown RBP15.73■□□□□ 0.11
SDHA-219ENST00000515815 C9orf131Q5VYM1 1079 aa15.73■□□□□ 0.11
SDHA-219ENST00000515815 NGEFQ8N5V2 710 aa15.73■□□□□ 0.11
SDHA-219ENST00000515815 ZNF622Q969S3 477 aaKnown RBP eCLIP15.73■□□□□ 0.11
SDHA-219ENST00000515815 SENP3-EIF4A1A0A087X0R7 540 aa15.72■□□□□ 0.11
SDHA-219ENST00000515815 ZBTB3Q9H5J0 574 aa15.72■□□□□ 0.11
SDHA-219ENST00000515815 TRIM35Q9UPQ4 493 aa15.72■□□□□ 0.11
SDHA-219ENST00000515815 LAS1LQ9Y4W2 734 aaKnown RBP15.72■□□□□ 0.11
SDHA-219ENST00000515815 ERVV-1B6SEH8 477 aa15.71■□□□□ 0.11
SDHA-219ENST00000515815 HLFQ16534 295 aa15.71■□□□□ 0.11
SDHA-219ENST00000515815 STYK1Q6J9G0 422 aa15.71■□□□□ 0.11
SDHA-219ENST00000515815 NYXQ9GZU5 481 aa15.71■□□□□ 0.11
SDHA-219ENST00000515815 ZNF316A6NFI3 1004 aaPredicted RBP15.7■□□□□ 0.1
SDHA-219ENST00000515815 FAM177BA6PVY3 158 aa15.7■□□□□ 0.1
SDHA-219ENST00000515815 EIF2S2P20042 333 aaKnown RBP15.7■□□□□ 0.1
SDHA-219ENST00000515815 PRPF40BQ6NWY9 871 aaKnown RBP15.7■□□□□ 0.1
SDHA-219ENST00000515815 TTLL7Q6ZT98 887 aa15.7■□□□□ 0.1
SDHA-219ENST00000515815 MASTLQ96GX5 879 aa15.7■□□□□ 0.1
SDHA-219ENST00000515815 UBN2Q6ZU65 1347 aa15.69■□□□□ 0.1
SDHA-219ENST00000515815 KDM2BQ8NHM5 1336 aa15.69■□□□□ 0.1
SDHA-219ENST00000515815 SRGNP10124 158 aa15.69■□□□□ 0.1
SDHA-219ENST00000515815 GTF2E1P29083 439 aaPredicted RBP15.69■□□□□ 0.1
SDHA-219ENST00000515815 CALD1Q05682 793 aaKnown RBP15.69■□□□□ 0.1
SDHA-219ENST00000515815 TPTE2Q6XPS3 522 aa15.69■□□□□ 0.1
SDHA-219ENST00000515815 CNKSR1Q969H4 720 aa15.69■□□□□ 0.1
SDHA-219ENST00000515815 NFKBIEO00221 500 aa15.68■□□□□ 0.1
SDHA-219ENST00000515815 HOXB7P09629 217 aa15.68■□□□□ 0.1
SDHA-219ENST00000515815 LMNB1P20700 586 aa15.68■□□□□ 0.1
SDHA-219ENST00000515815 GPTP24298 496 aa15.68■□□□□ 0.1
SDHA-219ENST00000515815 SOGA3Q5TF21 947 aa15.68■□□□□ 0.1
SDHA-219ENST00000515815 CHL1O00533 1208 aa15.67■□□□□ 0.1
SDHA-219ENST00000515815 APAF1O14727 1248 aa15.67■□□□□ 0.1
SDHA-219ENST00000515815 ANP32CO43423 234 aa15.67■□□□□ 0.1
SDHA-219ENST00000515815 C21orf2O43822 256 aa15.67■□□□□ 0.1
SDHA-219ENST00000515815 NPR1P16066 1061 aa15.67■□□□□ 0.1
SDHA-219ENST00000515815 KRT24Q2M2I5 525 aa15.67■□□□□ 0.1
SDHA-219ENST00000515815 HDGFL1Q5TGJ6 251 aa15.67■□□□□ 0.1
SDHA-219ENST00000515815 GIGYF2Q6Y7W6 1299 aaKnown RBP15.67■□□□□ 0.1
SDHA-219ENST00000515815 NECTIN2Q92692 538 aa15.67■□□□□ 0.1
SDHA-219ENST00000515815 CFAP44Q96MT7 982 aa15.67■□□□□ 0.1
SDHA-219ENST00000515815 ZNF219Q9P2Y4 722 aaPredicted RBP15.67■□□□□ 0.1
SDHA-219ENST00000515815 LTBP3Q9NS15 1303 aa15.67■□□□□ 0.1
SDHA-219ENST00000515815 LTBP1Q14766 1721 aa15.66■□□□□ 0.1
SDHA-219ENST00000515815 ANXA1P04083 346 aa15.66■□□□□ 0.1
SDHA-219ENST00000515815 PROSER3Q2NL68 480 aa15.66■□□□□ 0.1
SDHA-219ENST00000515815 TAOK3Q9H2K8 898 aa15.66■□□□□ 0.1
SDHA-219ENST00000515815 CHPF2Q9P2E5 772 aa15.66■□□□□ 0.1
SDHA-219ENST00000515815 A0A1B0GUL6 1792 aa15.66■□□□□ 0.1
SDHA-219ENST00000515815 RNF123Q5XPI4 1314 aa15.66■□□□□ 0.1
SDHA-219ENST00000515815 KIF3CO14782 793 aa15.65■□□□□ 0.1
SDHA-219ENST00000515815 NTSR2O95665 410 aa15.65■□□□□ 0.1
SDHA-219ENST00000515815 PDIA6Q15084 440 aa15.65■□□□□ 0.1
SDHA-219ENST00000515815 PARP10Q53GL7 1025 aa15.65■□□□□ 0.1
SDHA-219ENST00000515815 CCDC93Q567U6 631 aa15.65■□□□□ 0.1
SDHA-219ENST00000515815 LRP10Q7Z4F1 713 aa15.65■□□□□ 0.1
SDHA-219ENST00000515815 NUTM1Q86Y26 1132 aa15.65■□□□□ 0.1
SDHA-219ENST00000515815 MRS2Q9HD23 443 aa15.65■□□□□ 0.1
SDHA-219ENST00000515815 NMRK2Q9NPI5 230 aa15.65■□□□□ 0.1
SDHA-219ENST00000515815 DDX21Q9NR30 783 aaKnown RBP eCLIP15.65■□□□□ 0.1
SDHA-219ENST00000515815 MBIPQ9NS73 344 aa15.65■□□□□ 0.1
SDHA-219ENST00000515815 IFT57Q9NWB7 429 aa15.65■□□□□ 0.1
SDHA-219ENST00000515815 PSME4Q14997 1843 aa15.64■□□□□ 0.09
SDHA-219ENST00000515815 GNAI1P63096 354 aa15.64■□□□□ 0.09
SDHA-219ENST00000515815 HSP90AB3PQ58FF7 597 aa15.64■□□□□ 0.09
SDHA-219ENST00000515815 PPP1R42Q7Z4L9 355 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms