RNA–Protein interactions for RNA: ENST00000515627.2

LINC01843-201, Transcript of long intergenic non-protein coding RNA 1843, humanhuman

TSL 1 (best) BASIC

Gene LINC01843, Length 1,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01843-201ENST00000515627 CCDC88AQ3V6T2 1871 aa13.53□□□□□ -0.24
LINC01843-201ENST00000515627 RBM46Q8TBY0 533 aaKnown RBP13.52□□□□□ -0.25
LINC01843-201ENST00000515627 RRAGCQ9HB90 399 aa13.52□□□□□ -0.25
LINC01843-201ENST00000515627 KDM2BQ8NHM5 1336 aa13.52□□□□□ -0.25
LINC01843-201ENST00000515627 SLX4Q8IY92 1834 aa13.52□□□□□ -0.25
LINC01843-201ENST00000515627 FER1L6Q2WGJ9 1857 aa13.52□□□□□ -0.25
LINC01843-201ENST00000515627 ZC3H4Q9UPT8 1303 aaKnown RBP13.51□□□□□ -0.25
LINC01843-201ENST00000515627 C21orf2O43822 256 aa13.51□□□□□ -0.25
LINC01843-201ENST00000515627 SRGNP10124 158 aa13.51□□□□□ -0.25
LINC01843-201ENST00000515627 NFE2L2Q16236 605 aa13.51□□□□□ -0.25
LINC01843-201ENST00000515627 CLEC4GQ6UXB4 293 aa13.51□□□□□ -0.25
LINC01843-201ENST00000515627 NPM2Q86SE8 214 aaKnown RBP13.51□□□□□ -0.25
LINC01843-201ENST00000515627 PDZRN3Q9UPQ7 1066 aa13.51□□□□□ -0.25
LINC01843-201ENST00000515627 CACNA1SQ13698 1873 aa13.5□□□□□ -0.25
LINC01843-201ENST00000515627 ARFGEF2Q9Y6D5 1785 aa13.5□□□□□ -0.25
LINC01843-201ENST00000515627 HLFQ16534 295 aa13.5□□□□□ -0.25
LINC01843-201ENST00000515627 ZNF219Q9P2Y4 722 aaPredicted RBP13.5□□□□□ -0.25
LINC01843-201ENST00000515627 GLTPD2A6NH11 291 aa13.49□□□□□ -0.25
LINC01843-201ENST00000515627 RGL2O15211 777 aa13.49□□□□□ -0.25
LINC01843-201ENST00000515627 APLP1P51693 650 aa13.49□□□□□ -0.25
LINC01843-201ENST00000515627 EIF4A1P60842 406 aaKnown RBP13.49□□□□□ -0.25
LINC01843-201ENST00000515627 ST5P78524 1137 aa13.49□□□□□ -0.25
LINC01843-201ENST00000515627 STYK1Q6J9G0 422 aa13.49□□□□□ -0.25
LINC01843-201ENST00000515627 NBPF5PQ86XG9 351 aaPredicted RBP13.49□□□□□ -0.25
LINC01843-201ENST00000515627 DNAJC5GQ8N7S2 189 aa13.49□□□□□ -0.25
LINC01843-201ENST00000515627 WDR90Q96KV7 1748 aa13.48□□□□□ -0.25
LINC01843-201ENST00000515627 KLRG2A4D1S0 409 aaPredicted RBP13.48□□□□□ -0.25
LINC01843-201ENST00000515627 PRPF40BQ6NWY9 871 aaKnown RBP13.48□□□□□ -0.25
LINC01843-201ENST00000515627 PNISRQ8TF01 805 aaKnown RBP13.48□□□□□ -0.25
LINC01843-201ENST00000515627 CNKSR1Q969H4 720 aa13.48□□□□□ -0.25
LINC01843-201ENST00000515627 MASTLQ96GX5 879 aa13.48□□□□□ -0.25
LINC01843-201ENST00000515627 NIP7Q9Y221 180 aaKnown RBP eCLIP13.48□□□□□ -0.25
LINC01843-201ENST00000515627 ZNF652Q9Y2D9 606 aa13.48□□□□□ -0.25
LINC01843-201ENST00000515627 DICER1Q9UPY3 1922 aaKnown RBP13.48□□□□□ -0.25
LINC01843-201ENST00000515627 LTBP3Q9NS15 1303 aa13.47□□□□□ -0.25
LINC01843-201ENST00000515627 POTECB2RU33 542 aa13.47□□□□□ -0.25
LINC01843-201ENST00000515627 NPHP1O15259 732 aa13.47□□□□□ -0.25
LINC01843-201ENST00000515627 NEFMP07197 916 aa13.47□□□□□ -0.25
LINC01843-201ENST00000515627 HTRA3P83110 453 aa13.47□□□□□ -0.25
LINC01843-201ENST00000515627 C16orf71Q8IYS4 520 aaPredicted RBP13.47□□□□□ -0.25
LINC01843-201ENST00000515627 C7orf43Q8WVR3 580 aa13.47□□□□□ -0.25
LINC01843-201ENST00000515627 MAPK8IP3Q9UPT6 1336 aa13.46□□□□□ -0.25
LINC01843-201ENST00000515627 FAM177BA6PVY3 158 aa13.46□□□□□ -0.25
LINC01843-201ENST00000515627 FSTL1Q12841 308 aa13.46□□□□□ -0.25
LINC01843-201ENST00000515627 RALBP1Q15311 655 aa13.46□□□□□ -0.25
LINC01843-201ENST00000515627 TTLL7Q6ZT98 887 aa13.46□□□□□ -0.25
LINC01843-201ENST00000515627 NGEFQ8N5V2 710 aa13.46□□□□□ -0.25
LINC01843-201ENST00000515627 TAOK3Q9H2K8 898 aa13.46□□□□□ -0.25
LINC01843-201ENST00000515627 NUP98P52948 1817 aa13.46□□□□□ -0.26
LINC01843-201ENST00000515627 ABCC12Q96J65 1359 aa13.45□□□□□ -0.26
LINC01843-201ENST00000515627 ERFEQ4G0M1 354 aa13.45□□□□□ -0.26
LINC01843-201ENST00000515627 TPTE2Q6XPS3 522 aa13.45□□□□□ -0.26
LINC01843-201ENST00000515627 MAP3K15Q6ZN16 1313 aa13.44□□□□□ -0.26
LINC01843-201ENST00000515627 ERVV-1B6SEH8 477 aa13.44□□□□□ -0.26
LINC01843-201ENST00000515627 VEGFAP15692 232 aaPredicted RBP13.44□□□□□ -0.26
LINC01843-201ENST00000515627 NPR1P16066 1061 aa13.44□□□□□ -0.26
LINC01843-201ENST00000515627 DDX10Q13206 875 aaKnown RBP13.44□□□□□ -0.26
LINC01843-201ENST00000515627 OLFM4Q6UX06 510 aa13.44□□□□□ -0.26
LINC01843-201ENST00000515627 LRP10Q7Z4F1 713 aa13.44□□□□□ -0.26
LINC01843-201ENST00000515627 RRP7AQ9Y3A4 280 aaKnown RBP13.44□□□□□ -0.26
LINC01843-201ENST00000515627 UBN2Q6ZU65 1347 aa13.43□□□□□ -0.26
LINC01843-201ENST00000515627 MYL6BP14649 208 aa13.43□□□□□ -0.26
LINC01843-201ENST00000515627 RIPK4P57078 832 aa13.43□□□□□ -0.26
LINC01843-201ENST00000515627 PDIA6Q15084 440 aa13.43□□□□□ -0.26
LINC01843-201ENST00000515627 NUTM1Q86Y26 1132 aa13.43□□□□□ -0.26
LINC01843-201ENST00000515627 SMC1BQ8NDV3 1235 aa13.43□□□□□ -0.26
LINC01843-201ENST00000515627 SNED1Q8TER0 1413 aa13.43□□□□□ -0.26
LINC01843-201ENST00000515627 PNNQ9H307 717 aaKnown RBP13.43□□□□□ -0.26
LINC01843-201ENST00000515627 TMPOP42166 694 aaKnown RBP13.42□□□□□ -0.26
LINC01843-201ENST00000515627 CRY2Q49AN0 593 aa13.42□□□□□ -0.26
LINC01843-201ENST00000515627 SOGA3Q5TF21 947 aa13.42□□□□□ -0.26
LINC01843-201ENST00000515627 ZBTB3Q9H5J0 574 aa13.42□□□□□ -0.26
LINC01843-201ENST00000515627 TSPYL4Q9UJ04 414 aa13.42□□□□□ -0.26
LINC01843-201ENST00000515627 MYBBP1AQ9BQG0 1328 aaKnown RBP13.41□□□□□ -0.26
LINC01843-201ENST00000515627 DDNO94850 711 aaPredicted RBP13.41□□□□□ -0.26
LINC01843-201ENST00000515627 GPTP24298 496 aa13.41□□□□□ -0.26
LINC01843-201ENST00000515627 PROSER3Q2NL68 480 aa13.41□□□□□ -0.26
LINC01843-201ENST00000515627 CCDC93Q567U6 631 aa13.41□□□□□ -0.26
LINC01843-201ENST00000515627 ZNF34Q8IZ26 560 aa13.41□□□□□ -0.26
LINC01843-201ENST00000515627 IBTKQ9P2D0 1353 aaPredicted RBP13.41□□□□□ -0.26
LINC01843-201ENST00000515627 ERBB4Q15303 1308 aa13.4□□□□□ -0.26
LINC01843-201ENST00000515627 SUSD4Q5VX71 490 aa13.4□□□□□ -0.26
LINC01843-201ENST00000515627 DPY19L2Q6NUT2 758 aa13.4□□□□□ -0.26
LINC01843-201ENST00000515627 KIF6Q6ZMV9 814 aa13.4□□□□□ -0.26
LINC01843-201ENST00000515627 SLC51AQ86UW1 340 aa13.4□□□□□ -0.26
LINC01843-201ENST00000515627 CCDC146Q8IYE0 955 aa13.4□□□□□ -0.26
LINC01843-201ENST00000515627 KLRG1Q96E93 195 aa13.4□□□□□ -0.26
LINC01843-201ENST00000515627 RIC1Q4ADV7 1423 aa13.39□□□□□ -0.27
LINC01843-201ENST00000515627 NTSR2O95665 410 aa13.39□□□□□ -0.27
LINC01843-201ENST00000515627 ANXA1P04083 346 aa13.39□□□□□ -0.27
LINC01843-201ENST00000515627 POTEIP0CG38 1075 aa13.39□□□□□ -0.27
LINC01843-201ENST00000515627 POTEJP0CG39 1038 aa13.39□□□□□ -0.27
LINC01843-201ENST00000515627 GTF2E1P29083 439 aaPredicted RBP13.39□□□□□ -0.27
LINC01843-201ENST00000515627 FKBP4Q02790 459 aaKnown RBP eCLIP13.39□□□□□ -0.27
LINC01843-201ENST00000515627 GIGYF2Q6Y7W6 1299 aaKnown RBP13.39□□□□□ -0.27
LINC01843-201ENST00000515627 C3orf67Q6ZVT6 689 aa13.39□□□□□ -0.27
LINC01843-201ENST00000515627 ZNF277Q9NRM2 450 aaPredicted RBP13.39□□□□□ -0.27
LINC01843-201ENST00000515627 BABAM1Q9NWV8 329 aa13.39□□□□□ -0.27
LINC01843-201ENST00000515627 ZNF541Q9H0D2 1346 aa13.39□□□□□ -0.27
LINC01843-201ENST00000515627 COL4A5P29400 1685 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms