RNA–Protein interactions for RNA: ENST00000515343.1

AC025539.1-201, humanhuman

TSL 2 BASIC

Gene AC025539.1, Length 4,019 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025539.1-201ENST00000515343 ESF1Q9H501 851 aaKnown RBP3.02□□□□□ -1.93
AC025539.1-201ENST00000515343 ARHGEF10LQ9HCE6 1279 aa3.02□□□□□ -1.93
AC025539.1-201ENST00000515343 CAPN5O15484 640 aaPredicted RBP3.02□□□□□ -1.93
AC025539.1-201ENST00000515343 MRPL58Q14197 206 aaKnown RBP3.02□□□□□ -1.93
AC025539.1-201ENST00000515343 LYSMD3Q7Z3D4 306 aa3.02□□□□□ -1.93
AC025539.1-201ENST00000515343 L3MBTL2Q969R5 705 aa3.02□□□□□ -1.93
AC025539.1-201ENST00000515343 PRIMPOLQ96LW4 560 aa3.02□□□□□ -1.93
AC025539.1-201ENST00000515343 PODXL2Q9NZ53 605 aa3.02□□□□□ -1.93
AC025539.1-201ENST00000515343 SENP3-EIF4A1A0A087X0R7 540 aa3.02□□□□□ -1.93
AC025539.1-201ENST00000515343 SUSD3Q96L08 255 aa3.02□□□□□ -1.93
AC025539.1-201ENST00000515343 MSX1P28360 303 aa3.01□□□□□ -1.93
AC025539.1-201ENST00000515343 FAM26DQ5JW98 314 aa3.01□□□□□ -1.93
AC025539.1-201ENST00000515343 TRIM22Q8IYM9 498 aa3.01□□□□□ -1.93
AC025539.1-201ENST00000515343 ATP13A2Q9NQ11 1180 aa3.01□□□□□ -1.93
AC025539.1-201ENST00000515343 OPLAHO14841 1288 aa3.01□□□□□ -1.93
AC025539.1-201ENST00000515343 PDGFAP04085 211 aa3.01□□□□□ -1.93
AC025539.1-201ENST00000515343 PDE3BQ13370 1112 aa3.01□□□□□ -1.93
AC025539.1-201ENST00000515343 ARID5BQ14865 1188 aa3.01□□□□□ -1.93
AC025539.1-201ENST00000515343 ENOX2Q16206 610 aaKnown RBP3.01□□□□□ -1.93
AC025539.1-201ENST00000515343 PPP1R12BO60237 982 aaPredicted RBP3.01□□□□□ -1.93
AC025539.1-201ENST00000515343 F11P03951 625 aa3.01□□□□□ -1.93
AC025539.1-201ENST00000515343 GRNP28799 593 aaKnown RBP3.01□□□□□ -1.93
AC025539.1-201ENST00000515343 CTSOP43234 321 aaPredicted RBP3.01□□□□□ -1.93
AC025539.1-201ENST00000515343 TTC9Q92623 222 aa3.01□□□□□ -1.93
AC025539.1-201ENST00000515343 PMEPA1Q969W9 287 aa3.01□□□□□ -1.93
AC025539.1-201ENST00000515343 SAP130Q9H0E3 1048 aa3.01□□□□□ -1.93
AC025539.1-201ENST00000515343 TXLNAP40222 546 aa3□□□□□ -1.93
AC025539.1-201ENST00000515343 NBPF1Q3BBV0 1214 aa3□□□□□ -1.93
AC025539.1-201ENST00000515343 SCARA3Q6AZY7 606 aa3□□□□□ -1.93
AC025539.1-201ENST00000515343 PDE12Q6L8Q7 609 aaKnown RBP3□□□□□ -1.93
AC025539.1-201ENST00000515343 CARNS1A5YM72 827 aa3□□□□□ -1.93
AC025539.1-201ENST00000515343 TTLL8A6PVC2 850 aa3□□□□□ -1.93
AC025539.1-201ENST00000515343 KIF4AO95239 1232 aa3□□□□□ -1.93
AC025539.1-201ENST00000515343 SOX18P35713 384 aa3□□□□□ -1.93
AC025539.1-201ENST00000515343 PTPN12Q05209 780 aaKnown RBP3□□□□□ -1.93
AC025539.1-201ENST00000515343 FOXC1Q12948 553 aa3□□□□□ -1.93
AC025539.1-201ENST00000515343 SCARF1Q14162 830 aa3□□□□□ -1.93
AC025539.1-201ENST00000515343 ETFBKMTQ8IXQ9 262 aa3□□□□□ -1.93
AC025539.1-201ENST00000515343 PHACTR1Q9C0D0 580 aa3□□□□□ -1.93
AC025539.1-201ENST00000515343 SERTAD1Q9UHV2 236 aa3□□□□□ -1.93
AC025539.1-201ENST00000515343 UNC13AQ9UPW8 1703 aa3□□□□□ -1.93
AC025539.1-201ENST00000515343 MICAL2O94851 1124 aa3□□□□□ -1.93
AC025539.1-201ENST00000515343 MARSP56192 900 aaKnown RBP3□□□□□ -1.93
AC025539.1-201ENST00000515343 LDLRAD1Q5T700 205 aa3□□□□□ -1.93
AC025539.1-201ENST00000515343 ZSCAN29Q8IWY8 852 aaPredicted RBP3□□□□□ -1.93
AC025539.1-201ENST00000515343 HINFPQ9BQA5 517 aa3□□□□□ -1.93
AC025539.1-201ENST00000515343 KCNMB2Q9Y691 235 aa3□□□□□ -1.93
AC025539.1-201ENST00000515343 UPP2O95045 317 aa2.99□□□□□ -1.93
AC025539.1-201ENST00000515343 GTF2E1P29083 439 aaPredicted RBP2.99□□□□□ -1.93
AC025539.1-201ENST00000515343 SERPINB4P48594 390 aa2.99□□□□□ -1.93
AC025539.1-201ENST00000515343 PRPF40BQ6NWY9 871 aaKnown RBP2.99□□□□□ -1.93
AC025539.1-201ENST00000515343 FIGNL1Q6PIW4 674 aa2.99□□□□□ -1.93
AC025539.1-201ENST00000515343 TMC7Q7Z402 723 aa2.99□□□□□ -1.93
AC025539.1-201ENST00000515343 SEPT3Q9UH03 358 aa2.99□□□□□ -1.93
AC025539.1-201ENST00000515343 LCE2BO14633 110 aa2.99□□□□□ -1.93
AC025539.1-201ENST00000515343 EIF1AXP47813 144 aaKnown RBP2.99□□□□□ -1.93
AC025539.1-201ENST00000515343 DAB2P98082 770 aa2.99□□□□□ -1.93
AC025539.1-201ENST00000515343 KIAA0319Q5VV43 1072 aa2.99□□□□□ -1.93
AC025539.1-201ENST00000515343 AEBP1Q8IUX7 1158 aa2.99□□□□□ -1.93
AC025539.1-201ENST00000515343 AGBL1Q96MI9 1066 aa2.99□□□□□ -1.93
AC025539.1-201ENST00000515343 C8orf37Q96NL8 207 aa2.99□□□□□ -1.93
AC025539.1-201ENST00000515343 ARSDP51689 593 aa2.99□□□□□ -1.93
AC025539.1-201ENST00000515343 CAPN12Q6ZSI9 719 aa2.99□□□□□ -1.93
AC025539.1-201ENST00000515343 CACTIN-AS1Q8N1I8 211 aa2.99□□□□□ -1.93
AC025539.1-201ENST00000515343 IFT43Q96FT9 208 aa2.99□□□□□ -1.93
AC025539.1-201ENST00000515343 METTL5Q9NRN9 209 aaKnown RBP2.99□□□□□ -1.93
AC025539.1-201ENST00000515343 NACADO15069 1562 aa2.98□□□□□ -1.93
AC025539.1-201ENST00000515343 PRPF40AO75400 957 aaKnown RBP2.98□□□□□ -1.93
AC025539.1-201ENST00000515343 TATP17735 454 aaPredicted RBP2.98□□□□□ -1.93
AC025539.1-201ENST00000515343 TMEM214Q6NUQ4 689 aaKnown RBP2.98□□□□□ -1.93
AC025539.1-201ENST00000515343 TMC4Q7Z404 712 aa2.98□□□□□ -1.93
AC025539.1-201ENST00000515343 GSX2Q9BZM3 304 aa2.98□□□□□ -1.93
AC025539.1-201ENST00000515343 STAU1O95793 577 aaKnown RBP2.98□□□□□ -1.93
AC025539.1-201ENST00000515343 TNP2Q05952 138 aa2.98□□□□□ -1.93
AC025539.1-201ENST00000515343 PSME1Q06323 249 aa2.98□□□□□ -1.93
AC025539.1-201ENST00000515343 ALG1LQ6GMV1 187 aa2.98□□□□□ -1.93
AC025539.1-201ENST00000515343 BTLAQ7Z6A9 289 aa2.98□□□□□ -1.93
AC025539.1-201ENST00000515343 MYO15BQ96JP2 1530 aa2.98□□□□□ -1.93
AC025539.1-201ENST00000515343 ADARB2-AS1A8MUL3 147 aa2.98□□□□□ -1.93
AC025539.1-201ENST00000515343 NDUFB5O43674 189 aa2.98□□□□□ -1.93
AC025539.1-201ENST00000515343 GFRA3O60609 400 aa2.98□□□□□ -1.93
AC025539.1-201ENST00000515343 ST13P50502 369 aaKnown RBP2.98□□□□□ -1.93
AC025539.1-201ENST00000515343 TYRO3Q06418 890 aa2.98□□□□□ -1.93
AC025539.1-201ENST00000515343 GALNT12Q8IXK2 581 aa2.98□□□□□ -1.93
AC025539.1-201ENST00000515343 SRCIN1Q9C0H9 1055 aa2.98□□□□□ -1.93
AC025539.1-201ENST00000515343 DNMT3LQ9UJW3 386 aa2.98□□□□□ -1.93
AC025539.1-201ENST00000515343 H3BRB1 525 aa2.97□□□□□ -1.93
AC025539.1-201ENST00000515343 H7C1W4 665 aa2.97□□□□□ -1.93
AC025539.1-201ENST00000515343 GLYCTKQ8IVS8 523 aa2.97□□□□□ -1.93
AC025539.1-201ENST00000515343 CSRNP1Q96S65 589 aa2.97□□□□□ -1.93
AC025539.1-201ENST00000515343 INSM2Q96T92 566 aaPredicted RBP2.97□□□□□ -1.93
AC025539.1-201ENST00000515343 TUT1Q9H6E5 874 aaKnown RBP2.97□□□□□ -1.93
AC025539.1-201ENST00000515343 PRDM6Q9NQX0 595 aa2.97□□□□□ -1.93
AC025539.1-201ENST00000515343 MEN1O00255 615 aa2.97□□□□□ -1.93
AC025539.1-201ENST00000515343 AXIN1O15169 862 aa2.97□□□□□ -1.93
AC025539.1-201ENST00000515343 MPSTP25325 297 aa2.97□□□□□ -1.93
AC025539.1-201ENST00000515343 RHPN1Q8TCX5 695 aa2.97□□□□□ -1.93
AC025539.1-201ENST00000515343 ZFYVE28Q9HCC9 887 aa2.97□□□□□ -1.93
AC025539.1-201ENST00000515343 TIMMDC1Q9NPL8 285 aa2.97□□□□□ -1.93
AC025539.1-201ENST00000515343 CABP1Q9NZU7 370 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms