RNA–Protein interactions for RNA: ENST00000514909.1

LDHBP3-201, Transcript of lactate dehydrogenase B pseudogene 3, humanhuman

BASIC

Gene LDHBP3, Length 822 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHBP3-201ENST00000514909 DGKZQ13574 1117 aa11.86□□□□□ -0.51
LDHBP3-201ENST00000514909 PPARGC1BQ86YN6 1023 aaKnown RBP11.86□□□□□ -0.51
LDHBP3-201ENST00000514909 L3MBTL2Q969R5 705 aa11.86□□□□□ -0.51
LDHBP3-201ENST00000514909 NGLY1Q96IV0 654 aa11.86□□□□□ -0.51
LDHBP3-201ENST00000514909 VTI1BQ9UEU0 232 aa11.86□□□□□ -0.51
LDHBP3-201ENST00000514909 WWC3Q9ULE0 1092 aa11.86□□□□□ -0.51
LDHBP3-201ENST00000514909 PNMA6FA0A0J9YX94 578 aa11.85□□□□□ -0.51
LDHBP3-201ENST00000514909 GNA15P30679 374 aa11.85□□□□□ -0.51
LDHBP3-201ENST00000514909 PRR20EP86478 221 aa11.85□□□□□ -0.51
LDHBP3-201ENST00000514909 PRR20CP86479 221 aa11.85□□□□□ -0.51
LDHBP3-201ENST00000514909 PRR20DP86480 221 aa11.85□□□□□ -0.51
LDHBP3-201ENST00000514909 PRR20BP86481 221 aa11.85□□□□□ -0.51
LDHBP3-201ENST00000514909 PRR20AP86496 221 aa11.85□□□□□ -0.51
LDHBP3-201ENST00000514909 CENPCQ03188 943 aa11.85□□□□□ -0.51
LDHBP3-201ENST00000514909 SH3PXD2AQ5TCZ1 1133 aa11.85□□□□□ -0.51
LDHBP3-201ENST00000514909 Q6ZVU0 165 aa11.85□□□□□ -0.51
LDHBP3-201ENST00000514909 EDEM1Q92611 657 aa11.85□□□□□ -0.51
LDHBP3-201ENST00000514909 IFT43Q96FT9 208 aa11.85□□□□□ -0.51
LDHBP3-201ENST00000514909 MRGPRX2Q96LB1 330 aa11.85□□□□□ -0.51
LDHBP3-201ENST00000514909 ZNF232Q9UNY5 417 aa11.85□□□□□ -0.51
LDHBP3-201ENST00000514909 HMGB1P09429 215 aaKnown RBP11.84□□□□□ -0.51
LDHBP3-201ENST00000514909 PCSK2P16519 638 aa11.84□□□□□ -0.51
LDHBP3-201ENST00000514909 NT5DC4Q86YG4 428 aa11.84□□□□□ -0.51
LDHBP3-201ENST00000514909 RNF34Q969K3 372 aa11.84□□□□□ -0.51
LDHBP3-201ENST00000514909 TGIF2Q9GZN2 237 aa11.84□□□□□ -0.51
LDHBP3-201ENST00000514909 CABP1Q9NZU7 370 aa11.84□□□□□ -0.51
LDHBP3-201ENST00000514909 NEFLP07196 543 aa11.83□□□□□ -0.52
LDHBP3-201ENST00000514909 PTGIRP43119 386 aa11.83□□□□□ -0.52
LDHBP3-201ENST00000514909 DNM1Q05193 864 aaKnown RBP11.83□□□□□ -0.52
LDHBP3-201ENST00000514909 PHACTR1Q9C0D0 580 aa11.83□□□□□ -0.52
LDHBP3-201ENST00000514909 RNF19AQ9NV58 838 aa11.83□□□□□ -0.52
LDHBP3-201ENST00000514909 RPLP1P05386 114 aaKnown RBP11.82□□□□□ -0.52
LDHBP3-201ENST00000514909 C9orf131Q5VYM1 1079 aa11.82□□□□□ -0.52
LDHBP3-201ENST00000514909 PUS7Q96PZ0 661 aaKnown RBP11.82□□□□□ -0.52
LDHBP3-201ENST00000514909 CSRNP1Q96S65 589 aa11.82□□□□□ -0.52
LDHBP3-201ENST00000514909 CFHR5Q9BXR6 569 aa11.82□□□□□ -0.52
LDHBP3-201ENST00000514909 NIFKQ9BYG3 293 aaKnown RBP11.82□□□□□ -0.52
LDHBP3-201ENST00000514909 DNAJC25Q9H1X3 360 aa11.82□□□□□ -0.52
LDHBP3-201ENST00000514909 FAM13BQ9NYF5 915 aa11.82□□□□□ -0.52
LDHBP3-201ENST00000514909 HCN4Q9Y3Q4 1203 aa11.82□□□□□ -0.52
LDHBP3-201ENST00000514909 GDF9O60383 454 aa11.81□□□□□ -0.52
LDHBP3-201ENST00000514909 ZNF76P36508 570 aa11.81□□□□□ -0.52
LDHBP3-201ENST00000514909 NNTQ13423 1086 aa11.81□□□□□ -0.52
LDHBP3-201ENST00000514909 SLC43A3Q8NBI5 491 aa11.81□□□□□ -0.52
LDHBP3-201ENST00000514909 SETDB2Q96T68 719 aa11.81□□□□□ -0.52
LDHBP3-201ENST00000514909 HIF1AQ16665 826 aa11.8□□□□□ -0.52
LDHBP3-201ENST00000514909 ZNF697Q5TEC3 545 aa11.8□□□□□ -0.52
LDHBP3-201ENST00000514909 ZNF775Q96BV0 537 aaPredicted RBP11.8□□□□□ -0.52
LDHBP3-201ENST00000514909 CRELD1Q96HD1 420 aa11.8□□□□□ -0.52
LDHBP3-201ENST00000514909 NLRP3Q96P20 1036 aa11.8□□□□□ -0.52
LDHBP3-201ENST00000514909 TINF2Q9BSI4 451 aa11.8□□□□□ -0.52
LDHBP3-201ENST00000514909 KLK14Q9P0G3 267 aa11.8□□□□□ -0.52
LDHBP3-201ENST00000514909 DGAT1O75907 488 aa11.79□□□□□ -0.52
LDHBP3-201ENST00000514909 CANXP27824 592 aaKnown RBP11.79□□□□□ -0.52
LDHBP3-201ENST00000514909 FAM177A1Q8N128 213 aaPredicted RBP11.79□□□□□ -0.52
LDHBP3-201ENST00000514909 RHBDD1Q8TEB9 315 aa11.79□□□□□ -0.52
LDHBP3-201ENST00000514909 ZSCAN10Q96SZ4 725 aaPredicted RBP11.79□□□□□ -0.52
LDHBP3-201ENST00000514909 AK5Q9Y6K8 562 aa11.79□□□□□ -0.52
LDHBP3-201ENST00000514909 TREML1Q86YW5 311 aa11.78□□□□□ -0.52
LDHBP3-201ENST00000514909 HSP90B1P14625 803 aaKnown RBP11.77□□□□□ -0.53
LDHBP3-201ENST00000514909 GPC1P35052 558 aa11.77□□□□□ -0.53
LDHBP3-201ENST00000514909 CBLBQ13191 982 aa11.77□□□□□ -0.53
LDHBP3-201ENST00000514909 PKDCCQ504Y2 493 aa11.77□□□□□ -0.53
LDHBP3-201ENST00000514909 KLF16Q9BXK1 252 aaPredicted RBP11.77□□□□□ -0.53
LDHBP3-201ENST00000514909 CCSER2Q9H7U1 834 aa11.77□□□□□ -0.53
LDHBP3-201ENST00000514909 GPC6Q9Y625 555 aaPredicted RBP11.77□□□□□ -0.53
LDHBP3-201ENST00000514909 POTECB2RU33 542 aa11.76□□□□□ -0.53
LDHBP3-201ENST00000514909 EIF1AYO14602 144 aaKnown RBP11.76□□□□□ -0.53
LDHBP3-201ENST00000514909 GTF2E1P29083 439 aaPredicted RBP11.76□□□□□ -0.53
LDHBP3-201ENST00000514909 NUDT16Q96DE0 195 aaKnown RBP11.76□□□□□ -0.53
LDHBP3-201ENST00000514909 NLRP2Q9NX02 1062 aa11.76□□□□□ -0.53
LDHBP3-201ENST00000514909 SPG7Q9UQ90 795 aa11.76□□□□□ -0.53
LDHBP3-201ENST00000514909 TNFRSF10AO00220 468 aa11.75□□□□□ -0.53
LDHBP3-201ENST00000514909 MEN1O00255 615 aa11.75□□□□□ -0.53
LDHBP3-201ENST00000514909 ALDH1A1P00352 501 aa11.75□□□□□ -0.53
LDHBP3-201ENST00000514909 IER5Q5VY09 327 aa11.75□□□□□ -0.53
LDHBP3-201ENST00000514909 GPR152Q8TDT2 470 aa11.75□□□□□ -0.53
LDHBP3-201ENST00000514909 PARP3Q9Y6F1 533 aa11.75□□□□□ -0.53
LDHBP3-201ENST00000514909 WASF2Q9Y6W5 498 aa11.75□□□□□ -0.53
LDHBP3-201ENST00000514909 TGFBR3LH3BV60 316 aa11.74□□□□□ -0.53
LDHBP3-201ENST00000514909 ORC1Q13415 861 aa11.74□□□□□ -0.53
LDHBP3-201ENST00000514909 TMEM214Q6NUQ4 689 aaKnown RBP11.74□□□□□ -0.53
LDHBP3-201ENST00000514909 TTC16Q8NEE8 873 aa11.74□□□□□ -0.53
LDHBP3-201ENST00000514909 PPP1R1BQ9UD71 204 aaPredicted RBP11.74□□□□□ -0.53
LDHBP3-201ENST00000514909 BCS1LQ9Y276 419 aa11.74□□□□□ -0.53
LDHBP3-201ENST00000514909 GIPC1O14908 333 aa11.73□□□□□ -0.53
LDHBP3-201ENST00000514909 ARMC5Q96C12 935 aa11.73□□□□□ -0.53
LDHBP3-201ENST00000514909 ITPKCQ96DU7 683 aa11.73□□□□□ -0.53
LDHBP3-201ENST00000514909 GGNBP2Q9H3C7 697 aa11.73□□□□□ -0.53
LDHBP3-201ENST00000514909 ZDHHC3Q9NYG2 299 aa11.73□□□□□ -0.53
LDHBP3-201ENST00000514909 CPNE3O75131 537 aaKnown RBP11.72□□□□□ -0.53
LDHBP3-201ENST00000514909 MICAL2O94851 1124 aa11.72□□□□□ -0.53
LDHBP3-201ENST00000514909 CTSHP09668 335 aa11.72□□□□□ -0.53
LDHBP3-201ENST00000514909 TXLNAP40222 546 aa11.72□□□□□ -0.53
LDHBP3-201ENST00000514909 GNASQ5JWF2 1037 aa11.72□□□□□ -0.53
LDHBP3-201ENST00000514909 C7orf43Q8WVR3 580 aa11.72□□□□□ -0.53
LDHBP3-201ENST00000514909 GRIP2Q9C0E4 1043 aa11.72□□□□□ -0.53
LDHBP3-201ENST00000514909 PKD2L1Q9P0L9 805 aa11.72□□□□□ -0.53
LDHBP3-201ENST00000514909 FAM187AA6NFU0 413 aa11.71□□□□□ -0.53
LDHBP3-201ENST00000514909 ZIC2O95409 532 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms