RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 DZIP3Q86Y13 1208 aaKnown RBP30.66■■■□□ 2.5
SMAD1-214ENST00000514831 CNKSR1Q969H4 720 aa30.66■■■□□ 2.5
SMAD1-214ENST00000514831 PHACTR3Q96KR7 559 aa30.66■■■□□ 2.5
SMAD1-214ENST00000514831 NPHP1O15259 732 aa30.65■■■□□ 2.5
SMAD1-214ENST00000514831 SRGNP10124 158 aa30.64■■■□□ 2.5
SMAD1-214ENST00000514831 PRPF40BQ6NWY9 871 aaKnown RBP30.64■■■□□ 2.5
SMAD1-214ENST00000514831 SOGA3Q5TF21 947 aa30.63■■■□□ 2.49
SMAD1-214ENST00000514831 MASTLQ96GX5 879 aa30.62■■■□□ 2.49
SMAD1-214ENST00000514831 CFAP53Q96M91 514 aa30.62■■■□□ 2.49
SMAD1-214ENST00000514831 PCNTO95613 3336 aa30.61■■■□□ 2.49
SMAD1-214ENST00000514831 USP16Q9Y5T5 823 aa30.61■■■□□ 2.49
SMAD1-214ENST00000514831 CLEC4GQ6UXB4 293 aa30.6■■■□□ 2.49
SMAD1-214ENST00000514831 LAMB4A4D0S4 1761 aa30.59■■■□□ 2.49
SMAD1-214ENST00000514831 HSPA1AP0DMV8 641 aaKnown RBP30.58■■■□□ 2.49
SMAD1-214ENST00000514831 HSPA1BP0DMV9 641 aaKnown RBP30.58■■■□□ 2.49
SMAD1-214ENST00000514831 PIP4K2AP48426 406 aaPredicted RBP30.58■■■□□ 2.49
SMAD1-214ENST00000514831 ZNF652Q9Y2D9 606 aa30.58■■■□□ 2.49
SMAD1-214ENST00000514831 SCN4AP35499 1836 aa30.58■■■□□ 2.49
SMAD1-214ENST00000514831 PRAMEF22A3QJZ6 481 aa30.57■■■□□ 2.48
SMAD1-214ENST00000514831 NBPF5PQ86XG9 351 aaPredicted RBP30.57■■■□□ 2.48
SMAD1-214ENST00000514831 RGL2O15211 777 aa30.56■■■□□ 2.48
SMAD1-214ENST00000514831 SNRPA1P09661 255 aaKnown RBP30.56■■■□□ 2.48
SMAD1-214ENST00000514831 CHADLQ6NUI6 762 aa30.56■■■□□ 2.48
SMAD1-214ENST00000514831 TNS4Q8IZW8 715 aa30.56■■■□□ 2.48
SMAD1-214ENST00000514831 NUDCQ9Y266 331 aa30.56■■■□□ 2.48
SMAD1-214ENST00000514831 DDNO94850 711 aaPredicted RBP30.55■■■□□ 2.48
SMAD1-214ENST00000514831 RTF1Q92541 710 aaKnown RBP30.55■■■□□ 2.48
SMAD1-214ENST00000514831 C7orf43Q8WVR3 580 aa30.54■■■□□ 2.48
SMAD1-214ENST00000514831 CCDC93Q567U6 631 aa30.53■■■□□ 2.48
SMAD1-214ENST00000514831 MCM10Q7L590 875 aa30.53■■■□□ 2.48
SMAD1-214ENST00000514831 CREBZFQ9NS37 354 aa30.53■■■□□ 2.48
SMAD1-214ENST00000514831 POTEIP0CG38 1075 aa30.52■■■□□ 2.48
SMAD1-214ENST00000514831 POTEJP0CG39 1038 aa30.52■■■□□ 2.48
SMAD1-214ENST00000514831 NPR1P16066 1061 aa30.52■■■□□ 2.48
SMAD1-214ENST00000514831 KLRG2A4D1S0 409 aaPredicted RBP30.51■■■□□ 2.47
SMAD1-214ENST00000514831 U2AF1L5P0DN76 240 aaPredicted RBP30.51■■■□□ 2.47
SMAD1-214ENST00000514831 U2AF1Q01081 240 aaKnown RBP eCLIP30.51■■■□□ 2.47
SMAD1-214ENST00000514831 L3MBTL3Q96JM7 780 aaPredicted RBP30.51■■■□□ 2.47
SMAD1-214ENST00000514831 IQCA1LA6NCM1 817 aa30.5■■■□□ 2.47
SMAD1-214ENST00000514831 NBPF26B4DH59 902 aa30.5■■■□□ 2.47
SMAD1-214ENST00000514831 NBPF10Q6P3W6 841 aaKnown RBP30.5■■■□□ 2.47
SMAD1-214ENST00000514831 NBPF15Q8N660 670 aa30.5■■■□□ 2.47
SMAD1-214ENST00000514831 HTATSF1O43719 755 aaKnown RBP30.49■■■□□ 2.47
SMAD1-214ENST00000514831 NIP7Q9Y221 180 aaKnown RBP eCLIP30.49■■■□□ 2.47
SMAD1-214ENST00000514831 PPP2R1AP30153 589 aa30.48■■■□□ 2.47
SMAD1-214ENST00000514831 TPTE2Q6XPS3 522 aa30.48■■■□□ 2.47
SMAD1-214ENST00000514831 KDM3BQ7LBC6 1761 aa30.48■■■□□ 2.47
SMAD1-214ENST00000514831 FKBP4Q02790 459 aaKnown RBP eCLIP30.47■■■□□ 2.47
SMAD1-214ENST00000514831 ADAMTSL1Q8N6G6 1762 aa30.46■■■□□ 2.47
SMAD1-214ENST00000514831 DLG5Q8TDM6 1919 aa30.46■■■□□ 2.47
SMAD1-214ENST00000514831 DCTN1Q14203 1278 aa30.46■■■□□ 2.47
SMAD1-214ENST00000514831 LDHDQ86WU2 507 aa30.46■■■□□ 2.47
SMAD1-214ENST00000514831 CAPN15O75808 1086 aa30.45■■■□□ 2.47
SMAD1-214ENST00000514831 TAF1DQ9H5J8 278 aaPredicted RBP30.45■■■□□ 2.47
SMAD1-214ENST00000514831 PASKQ96RG2 1323 aa30.45■■■□□ 2.46
SMAD1-214ENST00000514831 MKRN1Q9UHC7 482 aaKnown RBP30.44■■■□□ 2.46
SMAD1-214ENST00000514831 NUP98P52948 1817 aa30.43■■■□□ 2.46
SMAD1-214ENST00000514831 ZNF541Q9H0D2 1346 aa30.43■■■□□ 2.46
SMAD1-214ENST00000514831 CNTNAP1P78357 1384 aa30.42■■■□□ 2.46
SMAD1-214ENST00000514831 SNED1Q8TER0 1413 aa30.42■■■□□ 2.46
SMAD1-214ENST00000514831 RTKN2Q8IZC4 609 aa30.42■■■□□ 2.46
SMAD1-214ENST00000514831 ZNF277Q9NRM2 450 aaPredicted RBP30.42■■■□□ 2.46
SMAD1-214ENST00000514831 TAF7Q15545 349 aaPredicted RBP30.41■■■□□ 2.46
SMAD1-214ENST00000514831 HLFQ16534 295 aa30.4■■■□□ 2.46
SMAD1-214ENST00000514831 OLFM4Q6UX06 510 aa30.4■■■□□ 2.46
SMAD1-214ENST00000514831 FAM177BA6PVY3 158 aa30.39■■■□□ 2.46
SMAD1-214ENST00000514831 ALDH1B1P30837 517 aa30.38■■■□□ 2.45
SMAD1-214ENST00000514831 ABCC12Q96J65 1359 aa30.38■■■□□ 2.45
SMAD1-214ENST00000514831 IARSP41252 1262 aaKnown RBP30.37■■■□□ 2.45
SMAD1-214ENST00000514831 CRY2Q49AN0 593 aa30.37■■■□□ 2.45
SMAD1-214ENST00000514831 HACL1Q9UJ83 578 aa30.37■■■□□ 2.45
SMAD1-214ENST00000514831 RIC1Q4ADV7 1423 aa30.37■■■□□ 2.45
SMAD1-214ENST00000514831 GTF2E1P29083 439 aaPredicted RBP30.36■■■□□ 2.45
SMAD1-214ENST00000514831 FZD9O00144 591 aa30.35■■■□□ 2.45
SMAD1-214ENST00000514831 ITGBL1O95965 494 aaPredicted RBP30.35■■■□□ 2.45
SMAD1-214ENST00000514831 NYXQ9GZU5 481 aa30.35■■■□□ 2.45
SMAD1-214ENST00000514831 MIS18AQ9NYP9 233 aa30.35■■■□□ 2.45
SMAD1-214ENST00000514831 IBTKQ9P2D0 1353 aaPredicted RBP30.35■■■□□ 2.45
SMAD1-214ENST00000514831 ERVV-1B6SEH8 477 aa30.34■■■□□ 2.45
SMAD1-214ENST00000514831 EPHX2P34913 555 aa30.34■■■□□ 2.45
SMAD1-214ENST00000514831 EAPPQ56P03 285 aaPredicted RBP30.34■■■□□ 2.45
SMAD1-214ENST00000514831 PSMD1Q99460 953 aa30.34■■■□□ 2.45
SMAD1-214ENST00000514831 MAP3K15Q6ZN16 1313 aa30.33■■■□□ 2.45
SMAD1-214ENST00000514831 TMEM88BA6NKF7 163 aa30.33■■■□□ 2.45
SMAD1-214ENST00000514831 SYNE4Q8N205 404 aa30.33■■■□□ 2.45
SMAD1-214ENST00000514831 PNISRQ8TF01 805 aaKnown RBP30.33■■■□□ 2.45
SMAD1-214ENST00000514831 RNF123Q5XPI4 1314 aa30.32■■■□□ 2.44
SMAD1-214ENST00000514831 COL4A5P29400 1685 aa30.31■■■□□ 2.44
SMAD1-214ENST00000514831 PNMA8AQ86V59 439 aaPredicted RBP30.31■■■□□ 2.44
SMAD1-214ENST00000514831 GPC2Q8N158 579 aa30.31■■■□□ 2.44
SMAD1-214ENST00000514831 NEFMP07197 916 aa30.3■■■□□ 2.44
SMAD1-214ENST00000514831 CC2D2BQ6DHV5 1058 aa30.3■■■□□ 2.44
SMAD1-214ENST00000514831 NUTM1Q86Y26 1132 aa30.3■■■□□ 2.44
SMAD1-214ENST00000514831 FOXN1O15353 648 aa30.29■■■□□ 2.44
SMAD1-214ENST00000514831 KIF6Q6ZMV9 814 aa30.29■■■□□ 2.44
SMAD1-214ENST00000514831 LTBP1Q14766 1721 aa30.28■■■□□ 2.44
SMAD1-214ENST00000514831 EIF4A1P60842 406 aaKnown RBP30.28■■■□□ 2.44
SMAD1-214ENST00000514831 NGEFQ8N5V2 710 aa30.28■■■□□ 2.44
SMAD1-214ENST00000514831 JDP2Q8WYK2 163 aa30.28■■■□□ 2.44
SMAD1-214ENST00000514831 CLEC11AQ9Y240 323 aa30.28■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms