RNA–Protein interactions for RNA: ENST00000514621.5

HIPK1-210, Transcript of homeodomain interacting protein kinase 1, human

TSL 4

Gene HIPK1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIPK1-210	ENST00000514621	SHANK2	Q9UPX8	1470 aa		9.89	□□□□□ -0.83
HIPK1-210	ENST00000514621	DHX29	Q7Z478	1369 aa	Known RBP	9.88	□□□□□ -0.83
HIPK1-210	ENST00000514621	AGL	P35573	1532 aa		9.88	□□□□□ -0.83
HIPK1-210	ENST00000514621	PIK3CD	O00329	1044 aa		9.88	□□□□□ -0.83
HIPK1-210	ENST00000514621	LZTS3	O60299	673 aa	Predicted RBP	9.88	□□□□□ -0.83
HIPK1-210	ENST00000514621	SKI	P12755	728 aa		9.88	□□□□□ -0.83
HIPK1-210	ENST00000514621	ESCO1	Q5FWF5	840 aa		9.88	□□□□□ -0.83
HIPK1-210	ENST00000514621	PRICKLE2	Q7Z3G6	844 aa		9.88	□□□□□ -0.83
HIPK1-210	ENST00000514621	GPR161	Q8N6U8	529 aa	Known RBP	9.88	□□□□□ -0.83
HIPK1-210	ENST00000514621	NANOS1	Q8WY41	292 aa	Known RBP	9.88	□□□□□ -0.83
HIPK1-210	ENST00000514621	PTPRK	Q15262	1439 aa		9.88	□□□□□ -0.83
HIPK1-210	ENST00000514621	RHOQ	P17081	205 aa		9.87	□□□□□ -0.83
HIPK1-210	ENST00000514621	ITGAE	P38570	1179 aa		9.87	□□□□□ -0.83
HIPK1-210	ENST00000514621	SLC27A3	Q5K4L6	730 aa		9.87	□□□□□ -0.83
HIPK1-210	ENST00000514621	RAB6B	Q9NRW1	208 aa		9.87	□□□□□ -0.83
HIPK1-210	ENST00000514621	RRP7BP	Q9NSQ0	103 aa		9.87	□□□□□ -0.83
HIPK1-210	ENST00000514621	PLXNC1	O60486	1568 aa		9.87	□□□□□ -0.83
HIPK1-210	ENST00000514621	CROCC2	H7BZ55	1655 aa		9.87	□□□□□ -0.83
HIPK1-210	ENST00000514621	ADGB	Q8N7X0	1667 aa		9.87	□□□□□ -0.83
HIPK1-210	ENST00000514621	KRT76	Q01546	638 aa		9.86	□□□□□ -0.83
HIPK1-210	ENST00000514621	NCOA1	Q15788	1441 aa		9.86	□□□□□ -0.83
HIPK1-210	ENST00000514621	EML3	Q32P44	896 aa		9.86	□□□□□ -0.83
HIPK1-210	ENST00000514621	BCORL1	Q5H9F3	1711 aa		9.86	□□□□□ -0.83
HIPK1-210	ENST00000514621	ZSCAN1	Q8NBB4	408 aa		9.86	□□□□□ -0.83
HIPK1-210	ENST00000514621	ADAMTS19	Q8TE59	1207 aa		9.86	□□□□□ -0.83
HIPK1-210	ENST00000514621	CNKSR1	Q969H4	720 aa		9.86	□□□□□ -0.83
HIPK1-210	ENST00000514621	ESYT1	Q9BSJ8	1104 aa		9.86	□□□□□ -0.83
HIPK1-210	ENST00000514621	ANKRD30A	Q9BXX3	1397 aa		9.86	□□□□□ -0.83
HIPK1-210	ENST00000514621	KIF15	Q9NS87	1388 aa		9.86	□□□□□ -0.83
HIPK1-210	ENST00000514621	KIF3B	O15066	747 aa		9.85	□□□□□ -0.83
HIPK1-210	ENST00000514621	IL2RA	P01589	272 aa		9.85	□□□□□ -0.83
HIPK1-210	ENST00000514621	TRIM26	Q12899	539 aa	Predicted RBP	9.85	□□□□□ -0.83
HIPK1-210	ENST00000514621	GRIP2	Q9C0E4	1043 aa		9.85	□□□□□ -0.83
HIPK1-210	ENST00000514621	ADAMTSL3	P82987	1691 aa		9.85	□□□□□ -0.83
HIPK1-210	ENST00000514621	ADGRL2	O95490	1459 aa		9.85	□□□□□ -0.83
HIPK1-210	ENST00000514621	DUOX2	Q9NRD8	1548 aa		9.84	□□□□□ -0.83
HIPK1-210	ENST00000514621	GGT6	Q6P531	493 aa		9.84	□□□□□ -0.83
HIPK1-210	ENST00000514621	VWA5B2	Q8N398	1253 aa		9.84	□□□□□ -0.83
HIPK1-210	ENST00000514621	XAGE2	Q96GT9	111 aa		9.84	□□□□□ -0.83
HIPK1-210	ENST00000514621	PCGF6	Q9BYE7	350 aa		9.84	□□□□□ -0.83
HIPK1-210	ENST00000514621	CDC14C	A4D256	554 aa		9.83	□□□□□ -0.84
HIPK1-210	ENST00000514621	CENPC	Q03188	943 aa		9.83	□□□□□ -0.84
HIPK1-210	ENST00000514621	CUEDC1	Q9NWM3	386 aa	Predicted RBP	9.83	□□□□□ -0.84
HIPK1-210	ENST00000514621	NOD1	Q9Y239	953 aa		9.83	□□□□□ -0.84
HIPK1-210	ENST00000514621	ROCK1	Q13464	1354 aa		9.83	□□□□□ -0.84
HIPK1-210	ENST00000514621	MADD	Q8WXG6	1647 aa		9.82	□□□□□ -0.84
HIPK1-210	ENST00000514621	USP17L5	A8MUK1	530 aa		9.82	□□□□□ -0.84
HIPK1-210	ENST00000514621	POU4F2	Q12837	409 aa		9.82	□□□□□ -0.84
HIPK1-210	ENST00000514621	GLMN	Q92990	594 aa		9.82	□□□□□ -0.84
HIPK1-210	ENST00000514621	COL25A1	Q9BXS0	654 aa	Predicted RBP	9.82	□□□□□ -0.84
HIPK1-210	ENST00000514621	HRH3	Q9Y5N1	445 aa		9.82	□□□□□ -0.84
HIPK1-210	ENST00000514621	SPATA31C2	B4DYI2	1134 aa		9.81	□□□□□ -0.84
HIPK1-210	ENST00000514621	GTF2E1	P29083	439 aa	Predicted RBP	9.81	□□□□□ -0.84
HIPK1-210	ENST00000514621	NCOA4	Q13772	614 aa		9.81	□□□□□ -0.84
HIPK1-210	ENST00000514621	RNFT1	Q5M7Z0	435 aa		9.81	□□□□□ -0.84
HIPK1-210	ENST00000514621	NBPF10	Q6P3W6	841 aa	Known RBP	9.81	□□□□□ -0.84
HIPK1-210	ENST00000514621	SV2A	Q7L0J3	742 aa		9.81	□□□□□ -0.84
HIPK1-210	ENST00000514621	NBPF15	Q8N660	670 aa		9.81	□□□□□ -0.84
HIPK1-210	ENST00000514621	ETNK1	Q9HBU6	452 aa		9.81	□□□□□ -0.84
HIPK1-210	ENST00000514621	ERBIN	Q96RT1	1412 aa		9.81	□□□□□ -0.84
HIPK1-210	ENST00000514621	PTPRM	P28827	1452 aa		9.8	□□□□□ -0.84
HIPK1-210	ENST00000514621	STAU1	O95793	577 aa	Known RBP	9.8	□□□□□ -0.84
HIPK1-210	ENST00000514621	WDR44	Q5JSH3	913 aa		9.8	□□□□□ -0.84
HIPK1-210	ENST00000514621	CALR3	Q96L12	384 aa	Known RBP	9.8	□□□□□ -0.84
HIPK1-210	ENST00000514621	CNTNAP3B	Q96NU0	1288 aa		9.8	□□□□□ -0.84
HIPK1-210	ENST00000514621	UCN2	Q96RP3	112 aa		9.8	□□□□□ -0.84
HIPK1-210	ENST00000514621	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	9.8	□□□□□ -0.84
HIPK1-210	ENST00000514621	CNTNAP3	Q9BZ76	1288 aa		9.8	□□□□□ -0.84
HIPK1-210	ENST00000514621	ANKRD50	Q9ULJ7	1429 aa		9.8	□□□□□ -0.84
HIPK1-210	ENST00000514621	ATP9B	O43861	1147 aa		9.79	□□□□□ -0.84
HIPK1-210	ENST00000514621	INHA	P05111	366 aa		9.79	□□□□□ -0.84
HIPK1-210	ENST00000514621	SCNN1D	P51172	638 aa		9.79	□□□□□ -0.84
HIPK1-210	ENST00000514621	GDF10	P55107	478 aa		9.79	□□□□□ -0.84
HIPK1-210	ENST00000514621	TBC1D9	Q6ZT07	1266 aa		9.79	□□□□□ -0.84
HIPK1-210	ENST00000514621	PLEKHM2	Q8IWE5	1019 aa		9.79	□□□□□ -0.84
HIPK1-210	ENST00000514621	DEPDC4	Q8N2C3	294 aa		9.79	□□□□□ -0.84
HIPK1-210	ENST00000514621	FHDC1	Q9C0D6	1143 aa	Predicted RBP	9.79	□□□□□ -0.84
HIPK1-210	ENST00000514621	DYRK1B	Q9Y463	629 aa		9.79	□□□□□ -0.84
HIPK1-210	ENST00000514621	RIMS1	Q86UR5	1692 aa	Known RBP	9.79	□□□□□ -0.84
HIPK1-210	ENST00000514621	EIF2AK4	Q9P2K8	1649 aa	Known RBP	9.78	□□□□□ -0.84
HIPK1-210	ENST00000514621	FER1L4	A9Z1Z3	1794 aa		9.78	□□□□□ -0.84
HIPK1-210	ENST00000514621	WASL	O00401	505 aa	Predicted RBP	9.78	□□□□□ -0.84
HIPK1-210	ENST00000514621	CEBPA	P49715	358 aa	Predicted RBP	9.78	□□□□□ -0.84
HIPK1-210	ENST00000514621	TMEM214	Q6NUQ4	689 aa	Known RBP	9.78	□□□□□ -0.84
HIPK1-210	ENST00000514621	TAS1R3	Q7RTX0	852 aa		9.78	□□□□□ -0.84
HIPK1-210	ENST00000514621	PCDHGA11	Q9Y5H2	935 aa		9.78	□□□□□ -0.84
HIPK1-210	ENST00000514621	CNTLN	Q9NXG0	1405 aa		9.78	□□□□□ -0.84
HIPK1-210	ENST00000514621	WASHC2C	Q9Y4E1	1318 aa		9.78	□□□□□ -0.84
HIPK1-210	ENST00000514621	ZMYM3	Q14202	1370 aa		9.77	□□□□□ -0.84
HIPK1-210	ENST00000514621	USP17L3	A6NCW0	530 aa		9.77	□□□□□ -0.85
HIPK1-210	ENST00000514621	USP17L4	A6NCW7	530 aa		9.77	□□□□□ -0.85
HIPK1-210	ENST00000514621	FAM181B	A6NEQ2	426 aa		9.77	□□□□□ -0.85
HIPK1-210	ENST00000514621	GTF2I	P78347	998 aa		9.77	□□□□□ -0.85
HIPK1-210	ENST00000514621	TLR1	Q15399	786 aa		9.77	□□□□□ -0.85
HIPK1-210	ENST00000514621	GNAS	Q5JWF2	1037 aa		9.77	□□□□□ -0.85
HIPK1-210	ENST00000514621	USP17L2	Q6R6M4	530 aa		9.77	□□□□□ -0.85
HIPK1-210	ENST00000514621	USP17L1	Q7RTZ2	530 aa		9.77	□□□□□ -0.85
HIPK1-210	ENST00000514621	TRIM50	Q86XT4	487 aa		9.77	□□□□□ -0.85
HIPK1-210	ENST00000514621	ZNF837	Q96EG3	531 aa	Predicted RBP	9.77	□□□□□ -0.85
HIPK1-210	ENST00000514621	GTF3C3	Q9Y5Q9	886 aa		9.77	□□□□□ -0.85

Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms