RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 GPAMQ9HCL2 828 aa9.23□□□□□ -0.93
HMGCS1-207ENST00000514610 ZBTB39O15060 712 aa9.22□□□□□ -0.93
HMGCS1-207ENST00000514610 TATP17735 454 aaPredicted RBP9.22□□□□□ -0.93
HMGCS1-207ENST00000514610 PTSQ03393 145 aa9.22□□□□□ -0.93
HMGCS1-207ENST00000514610 ZNF280CQ8ND82 737 aa9.22□□□□□ -0.93
HMGCS1-207ENST00000514610 KIFC2Q96AC6 838 aa9.22□□□□□ -0.93
HMGCS1-207ENST00000514610 ZIC5Q96T25 663 aa9.22□□□□□ -0.93
HMGCS1-207ENST00000514610 DYRK1BQ9Y463 629 aa9.22□□□□□ -0.93
HMGCS1-207ENST00000514610 SLC35F4A4IF30 521 aa9.21□□□□□ -0.94
HMGCS1-207ENST00000514610 ARHGAP4P98171 946 aa9.21□□□□□ -0.94
HMGCS1-207ENST00000514610 C11orf91Q3C1V1 193 aa9.21□□□□□ -0.94
HMGCS1-207ENST00000514610 ETFBKMTQ8IXQ9 262 aa9.21□□□□□ -0.94
HMGCS1-207ENST00000514610 HSH2DQ96JZ2 352 aa9.21□□□□□ -0.94
HMGCS1-207ENST00000514610 RUBCNLQ9H714 662 aa9.21□□□□□ -0.94
HMGCS1-207ENST00000514610 STIM2Q9P246 746 aa9.21□□□□□ -0.94
HMGCS1-207ENST00000514610 THBS1P07996 1170 aa9.2□□□□□ -0.94
HMGCS1-207ENST00000514610 BICDL1Q6ZP65 573 aa9.2□□□□□ -0.94
HMGCS1-207ENST00000514610 SUSD3Q96L08 255 aa9.2□□□□□ -0.94
HMGCS1-207ENST00000514610 GAS2L1Q99501 681 aaPredicted RBP9.2□□□□□ -0.94
HMGCS1-207ENST00000514610 BIN2Q9UBW5 565 aaPredicted RBP9.2□□□□□ -0.94
HMGCS1-207ENST00000514610 F11P03951 625 aa9.19□□□□□ -0.94
HMGCS1-207ENST00000514610 ARSJQ5FYB0 599 aaPredicted RBP9.19□□□□□ -0.94
HMGCS1-207ENST00000514610 IFT43Q96FT9 208 aa9.19□□□□□ -0.94
HMGCS1-207ENST00000514610 GPC6Q9Y625 555 aaPredicted RBP9.19□□□□□ -0.94
HMGCS1-207ENST00000514610 A0A1W2PNR3 127 aa9.18□□□□□ -0.94
HMGCS1-207ENST00000514610 FAM13AO94988 1023 aa9.18□□□□□ -0.94
HMGCS1-207ENST00000514610 BRD2P25440 801 aaKnown RBP9.18□□□□□ -0.94
HMGCS1-207ENST00000514610 EIF1AXP47813 144 aaKnown RBP9.18□□□□□ -0.94
HMGCS1-207ENST00000514610 MFAP1P55081 439 aaKnown RBP9.18□□□□□ -0.94
HMGCS1-207ENST00000514610 CRISPLD1Q9H336 500 aa9.18□□□□□ -0.94
HMGCS1-207ENST00000514610 CUEDC1Q9NWM3 386 aaPredicted RBP9.18□□□□□ -0.94
HMGCS1-207ENST00000514610 DMGDHQ9UI17 866 aaKnown RBP9.18□□□□□ -0.94
HMGCS1-207ENST00000514610 C11orf95C9JLR9 678 aaPredicted RBP9.17□□□□□ -0.94
HMGCS1-207ENST00000514610 TGFBR3LH3BV60 316 aa9.17□□□□□ -0.94
HMGCS1-207ENST00000514610 CCDC27Q2M243 656 aa9.17□□□□□ -0.94
HMGCS1-207ENST00000514610 LCE2AQ5TA79 106 aaPredicted RBP9.17□□□□□ -0.94
HMGCS1-207ENST00000514610 LRRC69Q6ZNQ3 347 aa9.17□□□□□ -0.94
HMGCS1-207ENST00000514610 ATCAYQ86WG3 371 aa9.17□□□□□ -0.94
HMGCS1-207ENST00000514610 CCDC155Q8N6L0 562 aa9.17□□□□□ -0.94
HMGCS1-207ENST00000514610 NOM1Q5C9Z4 860 aaKnown RBP9.16□□□□□ -0.94
HMGCS1-207ENST00000514610 TREML1Q86YW5 311 aa9.16□□□□□ -0.94
HMGCS1-207ENST00000514610 FZD6O60353 706 aa9.15□□□□□ -0.94
HMGCS1-207ENST00000514610 TREML4Q6UXN2 200 aa9.15□□□□□ -0.94
HMGCS1-207ENST00000514610 RIPOR1Q6ZS17 1223 aa9.15□□□□□ -0.94
HMGCS1-207ENST00000514610 ABTB2Q8N961 1025 aa9.15□□□□□ -0.94
HMGCS1-207ENST00000514610 MICAL2O94851 1124 aa9.14□□□□□ -0.95
HMGCS1-207ENST00000514610 ZAP70P43403 619 aa9.14□□□□□ -0.95
HMGCS1-207ENST00000514610 UBAP2LQ14157 1087 aaKnown RBP9.14□□□□□ -0.95
HMGCS1-207ENST00000514610 IER5Q5VY09 327 aa9.14□□□□□ -0.95
HMGCS1-207ENST00000514610 CCDC87Q9NVE4 849 aa9.14□□□□□ -0.95
HMGCS1-207ENST00000514610 CCDC9Q9Y3X0 531 aaKnown RBP9.14□□□□□ -0.95
HMGCS1-207ENST00000514610 OPLAHO14841 1288 aa9.13□□□□□ -0.95
HMGCS1-207ENST00000514610 DBN1Q16643 649 aa9.13□□□□□ -0.95
HMGCS1-207ENST00000514610 HIF1AQ16665 826 aa9.13□□□□□ -0.95
HMGCS1-207ENST00000514610 PGBD3Q8N328 593 aa9.13□□□□□ -0.95
HMGCS1-207ENST00000514610 GRNP28799 593 aaKnown RBP9.12□□□□□ -0.95
HMGCS1-207ENST00000514610 IDH3AP50213 366 aa9.12□□□□□ -0.95
HMGCS1-207ENST00000514610 MARSP56192 900 aaKnown RBP9.12□□□□□ -0.95
HMGCS1-207ENST00000514610 TYRO3Q06418 890 aa9.12□□□□□ -0.95
HMGCS1-207ENST00000514610 ALKBH2Q6NS38 261 aa9.12□□□□□ -0.95
HMGCS1-207ENST00000514610 DNAJC14Q6Y2X3 702 aaPredicted RBP9.12□□□□□ -0.95
HMGCS1-207ENST00000514610 BTLAQ7Z6A9 289 aa9.12□□□□□ -0.95
HMGCS1-207ENST00000514610 NLRP8Q86W28 1048 aa9.12□□□□□ -0.95
HMGCS1-207ENST00000514610 ANKIB1Q9P2G1 1089 aa9.12□□□□□ -0.95
HMGCS1-207ENST00000514610 ITGA6P23229 1130 aa9.11□□□□□ -0.95
HMGCS1-207ENST00000514610 INPP5BP32019 993 aa9.11□□□□□ -0.95
HMGCS1-207ENST00000514610 ZNF837Q96EG3 531 aaPredicted RBP9.11□□□□□ -0.95
HMGCS1-207ENST00000514610 ZCCHC2Q9C0B9 1178 aaKnown RBP9.11□□□□□ -0.95
HMGCS1-207ENST00000514610 NUCKS1Q9H1E3 243 aaKnown RBP9.11□□□□□ -0.95
HMGCS1-207ENST00000514610 NEUROD4Q9HD90 331 aa9.11□□□□□ -0.95
HMGCS1-207ENST00000514610 DCTN4Q9UJW0 460 aa9.11□□□□□ -0.95
HMGCS1-207ENST00000514610 HCN2Q9UL51 889 aa9.11□□□□□ -0.95
HMGCS1-207ENST00000514610 USP20Q9Y2K6 914 aa9.11□□□□□ -0.95
HMGCS1-207ENST00000514610 GJA3Q9Y6H8 435 aa9.11□□□□□ -0.95
HMGCS1-207ENST00000514610 PPFIA3O75145 1194 aa9.1□□□□□ -0.95
HMGCS1-207ENST00000514610 MAPK1P28482 360 aa9.1□□□□□ -0.95
HMGCS1-207ENST00000514610 EFHC2Q5JST6 749 aa9.1□□□□□ -0.95
HMGCS1-207ENST00000514610 SAMD5Q5TGI4 173 aa9.1□□□□□ -0.95
HMGCS1-207ENST00000514610 TRIM22Q8IYM9 498 aa9.1□□□□□ -0.95
HMGCS1-207ENST00000514610 GPR152Q8TDT2 470 aa9.1□□□□□ -0.95
HMGCS1-207ENST00000514610 EDEM1Q92611 657 aa9.1□□□□□ -0.95
HMGCS1-207ENST00000514610 POLIQ9UNA4 740 aa9.1□□□□□ -0.95
HMGCS1-207ENST00000514610 PDGFAP04085 211 aa9.09□□□□□ -0.95
HMGCS1-207ENST00000514610 DNM1Q05193 864 aaKnown RBP9.09□□□□□ -0.95
HMGCS1-207ENST00000514610 AAMPQ13685 434 aa9.09□□□□□ -0.95
HMGCS1-207ENST00000514610 LBRQ14739 615 aaKnown RBP9.09□□□□□ -0.95
HMGCS1-207ENST00000514610 RGS22Q8NE09 1264 aa9.09□□□□□ -0.95
HMGCS1-207ENST00000514610 MZF1P28698 734 aaPredicted RBP9.08□□□□□ -0.96
HMGCS1-207ENST00000514610 ARSDP51689 593 aa9.08□□□□□ -0.96
HMGCS1-207ENST00000514610 CEP63Q96MT8 703 aa9.08□□□□□ -0.96
HMGCS1-207ENST00000514610 NDFIP2Q9NV92 336 aa9.08□□□□□ -0.96
HMGCS1-207ENST00000514610 BRPF3Q9ULD4 1205 aa9.08□□□□□ -0.96
HMGCS1-207ENST00000514610 H7C1W4 665 aa9.07□□□□□ -0.96
HMGCS1-207ENST00000514610 ATXN7O15265 892 aaPredicted RBP9.07□□□□□ -0.96
HMGCS1-207ENST00000514610 EFSO43281 561 aa9.07□□□□□ -0.96
HMGCS1-207ENST00000514610 NDUFB5O43674 189 aa9.07□□□□□ -0.96
HMGCS1-207ENST00000514610 IGHA2P01877 340 aa9.07□□□□□ -0.96
HMGCS1-207ENST00000514610 FAM157BP0CG42 384 aa9.07□□□□□ -0.96
HMGCS1-207ENST00000514610 RGL4Q8IZJ4 473 aa9.07□□□□□ -0.96
HMGCS1-207ENST00000514610 NUDT16Q96DE0 195 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms