RNA–Protein interactions for RNA: ENST00000514485.5

PACRGL-231, Transcript of parkin coregulated like, human

TSL 3

Gene PACRGL, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PACRGL-231	ENST00000514485	DICER1	Q9UPY3	1922 aa	Known RBP	27.86	■■■□□ 2.05
PACRGL-231	ENST00000514485	RASSF7	Q02833	373 aa		27.85	■■■□□ 2.05
PACRGL-231	ENST00000514485	PRR5L	Q6MZQ0	368 aa		27.85	■■■□□ 2.05
PACRGL-231	ENST00000514485	DZIP3	Q86Y13	1208 aa	Known RBP	27.85	■■■□□ 2.05
PACRGL-231	ENST00000514485	RNF181	Q9P0P0	153 aa		27.85	■■■□□ 2.05
PACRGL-231	ENST00000514485	TSPYL4	Q9UJ04	414 aa		27.85	■■■□□ 2.05
PACRGL-231	ENST00000514485	NUP98	P52948	1817 aa		27.85	■■■□□ 2.05
PACRGL-231	ENST00000514485	SLX4	Q8IY92	1834 aa		27.84	■■■□□ 2.05
PACRGL-231	ENST00000514485	NPM2	Q86SE8	214 aa	Known RBP	27.84	■■■□□ 2.05
PACRGL-231	ENST00000514485	NMRK2	Q9NPI5	230 aa		27.84	■■■□□ 2.05
PACRGL-231	ENST00000514485		H0YIN7	160 aa		27.83	■■■□□ 2.05
PACRGL-231	ENST00000514485	EIF4A1	P60842	406 aa	Known RBP	27.83	■■■□□ 2.05
PACRGL-231	ENST00000514485	TTLL6	Q8N841	843 aa		27.83	■■■□□ 2.05
PACRGL-231	ENST00000514485	NBPF26	B4DH59	902 aa		27.82	■■■□□ 2.04
PACRGL-231	ENST00000514485	NBPF10	Q6P3W6	841 aa	Known RBP	27.82	■■■□□ 2.04
PACRGL-231	ENST00000514485	NBPF15	Q8N660	670 aa		27.82	■■■□□ 2.04
PACRGL-231	ENST00000514485	SETDB2	Q96T68	719 aa		27.81	■■■□□ 2.04
PACRGL-231	ENST00000514485	LAS1L	Q9Y4W2	734 aa	Known RBP	27.81	■■■□□ 2.04
PACRGL-231	ENST00000514485	HSPA6	P17066	643 aa		27.8	■■■□□ 2.04
PACRGL-231	ENST00000514485	BRIP1	Q9BX63	1249 aa		27.8	■■■□□ 2.04
PACRGL-231	ENST00000514485	PRELP	P51888	382 aa		27.79	■■■□□ 2.04
PACRGL-231	ENST00000514485	PDE6B	P35913	854 aa		27.78	■■■□□ 2.04
PACRGL-231	ENST00000514485	CNBD1	Q8NA66	436 aa		27.78	■■■□□ 2.04
PACRGL-231	ENST00000514485	ZNF622	Q969S3	477 aa	Known RBP eCLIP	27.77	■■■□□ 2.04
PACRGL-231	ENST00000514485	BABAM1	Q9NWV8	329 aa		27.77	■■■□□ 2.04
PACRGL-231	ENST00000514485	CLEC4G	Q6UXB4	293 aa		27.75	■■■□□ 2.03
PACRGL-231	ENST00000514485	NFKBIE	O00221	500 aa		27.74	■■■□□ 2.03
PACRGL-231	ENST00000514485	CHL1	O00533	1208 aa		27.74	■■■□□ 2.03
PACRGL-231	ENST00000514485	TOMM70	O94826	608 aa		27.74	■■■□□ 2.03
PACRGL-231	ENST00000514485	FAM9B	Q8IZU0	186 aa		27.74	■■■□□ 2.03
PACRGL-231	ENST00000514485	PDZRN3	Q9UPQ7	1066 aa		27.74	■■■□□ 2.03
PACRGL-231	ENST00000514485	NPHP1	O15259	732 aa		27.73	■■■□□ 2.03
PACRGL-231	ENST00000514485	ST5	P78524	1137 aa		27.73	■■■□□ 2.03
PACRGL-231	ENST00000514485	ZNF219	Q9P2Y4	722 aa	Predicted RBP	27.73	■■■□□ 2.03
PACRGL-231	ENST00000514485	ZNF652	Q9Y2D9	606 aa		27.73	■■■□□ 2.03
PACRGL-231	ENST00000514485	WDR90	Q96KV7	1748 aa		27.72	■■■□□ 2.03
PACRGL-231	ENST00000514485	KDM2B	Q8NHM5	1336 aa		27.72	■■■□□ 2.03
PACRGL-231	ENST00000514485	LMNB1	P20700	586 aa		27.72	■■■□□ 2.03
PACRGL-231	ENST00000514485	NBPF5P	Q86XG9	351 aa	Predicted RBP	27.71	■■■□□ 2.03
PACRGL-231	ENST00000514485	C21orf2	O43822	256 aa		27.7	■■■□□ 2.02
PACRGL-231	ENST00000514485	HLF	Q16534	295 aa		27.7	■■■□□ 2.02
PACRGL-231	ENST00000514485	KRT24	Q2M2I5	525 aa		27.7	■■■□□ 2.02
PACRGL-231	ENST00000514485	CFAP44	Q96MT7	982 aa		27.7	■■■□□ 2.02
PACRGL-231	ENST00000514485	ZC3H4	Q9UPT8	1303 aa	Known RBP	27.69	■■■□□ 2.02
PACRGL-231	ENST00000514485	SRGN	P10124	158 aa		27.69	■■■□□ 2.02
PACRGL-231	ENST00000514485	RRAGC	Q9HB90	399 aa		27.69	■■■□□ 2.02
PACRGL-231	ENST00000514485	NIP7	Q9Y221	180 aa	Known RBP eCLIP	27.69	■■■□□ 2.02
PACRGL-231	ENST00000514485	EIF2S2	P20042	333 aa	Known RBP	27.68	■■■□□ 2.02
PACRGL-231	ENST00000514485	RGL2	O15211	777 aa		27.67	■■■□□ 2.02
PACRGL-231	ENST00000514485	STYK1	Q6J9G0	422 aa		27.67	■■■□□ 2.02
PACRGL-231	ENST00000514485	NGEF	Q8N5V2	710 aa		27.67	■■■□□ 2.02
PACRGL-231	ENST00000514485	MBIP	Q9NS73	344 aa		27.67	■■■□□ 2.02
PACRGL-231	ENST00000514485	CALD1	Q05682	793 aa	Known RBP	27.66	■■■□□ 2.02
PACRGL-231	ENST00000514485	PRPF40B	Q6NWY9	871 aa	Known RBP	27.66	■■■□□ 2.02
PACRGL-231	ENST00000514485	SALL2	Q9Y467	1007 aa	Predicted RBP	27.66	■■■□□ 2.02
PACRGL-231	ENST00000514485	FAM177B	A6PVY3	158 aa		27.65	■■■□□ 2.02
PACRGL-231	ENST00000514485	ZNF853	P0CG23	659 aa		27.65	■■■□□ 2.02
PACRGL-231	ENST00000514485	MYL6B	P14649	208 aa		27.65	■■■□□ 2.02
PACRGL-231	ENST00000514485	C16orf71	Q8IYS4	520 aa	Predicted RBP	27.65	■■■□□ 2.02
PACRGL-231	ENST00000514485	RBM46	Q8TBY0	533 aa	Known RBP	27.65	■■■□□ 2.02
PACRGL-231	ENST00000514485	NECTIN2	Q92692	538 aa		27.65	■■■□□ 2.02
PACRGL-231	ENST00000514485	CNKSR1	Q969H4	720 aa		27.65	■■■□□ 2.02
PACRGL-231	ENST00000514485	MASTL	Q96GX5	879 aa		27.65	■■■□□ 2.02
PACRGL-231	ENST00000514485	IFT57	Q9NWB7	429 aa		27.65	■■■□□ 2.02
PACRGL-231	ENST00000514485	GNAI1	P63096	354 aa		27.64	■■■□□ 2.02
PACRGL-231	ENST00000514485	ANKRD36C	Q5JPF3	1778 aa		27.63	■■■□□ 2.01
PACRGL-231	ENST00000514485	CCDC27	Q2M243	656 aa		27.63	■■■□□ 2.01
PACRGL-231	ENST00000514485	TTLL7	Q6ZT98	887 aa		27.63	■■■□□ 2.01
PACRGL-231	ENST00000514485	WWC1	Q8IX03	1113 aa		27.63	■■■□□ 2.01
PACRGL-231	ENST00000514485	GLTPD2	A6NH11	291 aa		27.62	■■■□□ 2.01
PACRGL-231	ENST00000514485	TPTE2	Q6XPS3	522 aa		27.62	■■■□□ 2.01
PACRGL-231	ENST00000514485	MAP3K15	Q6ZN16	1313 aa		27.62	■■■□□ 2.01
PACRGL-231	ENST00000514485	APLP1	P51693	650 aa		27.61	■■■□□ 2.01
PACRGL-231	ENST00000514485	ERBB4	Q15303	1308 aa		27.61	■■■□□ 2.01
PACRGL-231	ENST00000514485	LTBP3	Q9NS15	1303 aa		27.61	■■■□□ 2.01
PACRGL-231	ENST00000514485	KLRG2	A4D1S0	409 aa	Predicted RBP	27.6	■■■□□ 2.01
PACRGL-231	ENST00000514485	ANXA1	P04083	346 aa		27.6	■■■□□ 2.01
PACRGL-231	ENST00000514485	ABCC12	Q96J65	1359 aa		27.6	■■■□□ 2.01
PACRGL-231	ENST00000514485	ERVV-1	B6SEH8	477 aa		27.59	■■■□□ 2.01
PACRGL-231	ENST00000514485	NPR1	P16066	1061 aa		27.59	■■■□□ 2.01
PACRGL-231	ENST00000514485	PROSER3	Q2NL68	480 aa		27.59	■■■□□ 2.01
PACRGL-231	ENST00000514485	TAOK3	Q9H2K8	898 aa		27.59	■■■□□ 2.01
PACRGL-231	ENST00000514485	PDIA6	Q15084	440 aa		27.58	■■■□□ 2.01
PACRGL-231	ENST00000514485	DUSP27	Q5VZP5	1158 aa		27.58	■■■□□ 2.01
PACRGL-231	ENST00000514485	KIF6	Q6ZMV9	814 aa		27.58	■■■□□ 2.01
PACRGL-231	ENST00000514485	ZBTB3	Q9H5J0	574 aa		27.58	■■■□□ 2.01
PACRGL-231	ENST00000514485	ERFE	Q4G0M1	354 aa		27.57	■■■□□ 2
PACRGL-231	ENST00000514485	DIEXF	Q68CQ4	756 aa	Known RBP	27.57	■■■□□ 2
PACRGL-231	ENST00000514485	C7orf43	Q8WVR3	580 aa		27.57	■■■□□ 2
PACRGL-231	ENST00000514485	LAMB2	P55268	1798 aa		27.56	■■■□□ 2
PACRGL-231	ENST00000514485	FSTL1	Q12841	308 aa		27.56	■■■□□ 2
PACRGL-231	ENST00000514485	NCBP3	Q53F19	620 aa	Known RBP	27.56	■■■□□ 2
PACRGL-231	ENST00000514485	NUTM1	Q86Y26	1132 aa		27.56	■■■□□ 2
PACRGL-231	ENST00000514485	UBN2	Q6ZU65	1347 aa		27.56	■■■□□ 2
PACRGL-231	ENST00000514485	CCER2	I3L3R5	266 aa		27.55	■■■□□ 2
PACRGL-231	ENST00000514485	ELL2	O00472	640 aa	Predicted RBP	27.55	■■■□□ 2
PACRGL-231	ENST00000514485	GPT	P24298	496 aa		27.55	■■■□□ 2
PACRGL-231	ENST00000514485	SOGA3	Q5TF21	947 aa		27.55	■■■□□ 2
PACRGL-231	ENST00000514485	HDGFL1	Q5TGJ6	251 aa		27.55	■■■□□ 2
PACRGL-231	ENST00000514485	TSR2	Q969E8	191 aa	Known RBP	27.55	■■■□□ 2

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