RNA–Protein interactions for RNA: ENST00000514168.1

SMAD1-212, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-212ENST00000514168 PRELPP51888 382 aa15.35■□□□□ 0.05
SMAD1-212ENST00000514168 DUSP27Q5VZP5 1158 aa15.35■□□□□ 0.05
SMAD1-212ENST00000514168 DNAJC10Q8IXB1 793 aa15.35■□□□□ 0.05
SMAD1-212ENST00000514168 ZNF496Q96IT1 587 aaPredicted RBP15.35■□□□□ 0.05
SMAD1-212ENST00000514168 FMNL2Q96PY5 1086 aa15.35■□□□□ 0.05
SMAD1-212ENST00000514168 ANKRD31Q8N7Z5 1873 aa15.34■□□□□ 0.05
SMAD1-212ENST00000514168 HTRA3P83110 453 aa15.34■□□□□ 0.05
SMAD1-212ENST00000514168 DALRD3Q5D0E6 543 aaKnown RBP15.34■□□□□ 0.05
SMAD1-212ENST00000514168 BCL2L12Q9HB09 334 aa15.34■□□□□ 0.05
SMAD1-212ENST00000514168 HEG1Q9ULI3 1381 aa15.34■□□□□ 0.05
SMAD1-212ENST00000514168 LAMB4A4D0S4 1761 aa15.34■□□□□ 0.05
SMAD1-212ENST00000514168 CYP19A1P11511 503 aaPredicted RBP15.33■□□□□ 0.04
SMAD1-212ENST00000514168 EXOSC9Q06265 439 aaKnown RBP15.32■□□□□ 0.04
SMAD1-212ENST00000514168 USPL1Q5W0Q7 1092 aa15.32■□□□□ 0.04
SMAD1-212ENST00000514168 VSIG10Q8N0Z9 540 aa15.32■□□□□ 0.04
SMAD1-212ENST00000514168 JMYQ8N9B5 988 aa15.32■□□□□ 0.04
SMAD1-212ENST00000514168 RNF181Q9P0P0 153 aa15.32■□□□□ 0.04
SMAD1-212ENST00000514168 SNRPA1P09661 255 aaKnown RBP15.31■□□□□ 0.04
SMAD1-212ENST00000514168 NFIXQ14938 502 aa15.31■□□□□ 0.04
SMAD1-212ENST00000514168 KRT24Q2M2I5 525 aa15.31■□□□□ 0.04
SMAD1-212ENST00000514168 TIAM2Q8IVF5 1701 aa15.31■□□□□ 0.04
SMAD1-212ENST00000514168 DICER1Q9UPY3 1922 aaKnown RBP15.31■□□□□ 0.04
SMAD1-212ENST00000514168 ELL2O00472 640 aaPredicted RBP15.3■□□□□ 0.04
SMAD1-212ENST00000514168 FSTL1Q12841 308 aa15.3■□□□□ 0.04
SMAD1-212ENST00000514168 TWISTNBQ3B726 338 aaPredicted RBP15.3■□□□□ 0.04
SMAD1-212ENST00000514168 C8orf58Q8NAV2 365 aa15.3■□□□□ 0.04
SMAD1-212ENST00000514168 KLRG1Q96E93 195 aa15.3■□□□□ 0.04
SMAD1-212ENST00000514168 TEX13AQ9BXU3 409 aaPredicted RBP15.3■□□□□ 0.04
SMAD1-212ENST00000514168 RRAGCQ9HB90 399 aa15.3■□□□□ 0.04
SMAD1-212ENST00000514168 NARFQ9UHQ1 456 aa15.3■□□□□ 0.04
SMAD1-212ENST00000514168 ZBTB1Q9Y2K1 713 aa15.3■□□□□ 0.04
SMAD1-212ENST00000514168 FER1L6Q2WGJ9 1857 aa15.29■□□□□ 0.04
SMAD1-212ENST00000514168 COL15A1P39059 1388 aa15.29■□□□□ 0.04
SMAD1-212ENST00000514168 CARMIL3Q8ND23 1372 aa15.29■□□□□ 0.04
SMAD1-212ENST00000514168 HOXB7P09629 217 aa15.29■□□□□ 0.04
SMAD1-212ENST00000514168 RASSF7Q02833 373 aa15.29■□□□□ 0.04
SMAD1-212ENST00000514168 TSPYL6Q8N831 410 aa15.29■□□□□ 0.04
SMAD1-212ENST00000514168 CACNA1FO60840 1977 aa15.29■□□□□ 0.04
SMAD1-212ENST00000514168 COL11A2P13942 1736 aaPredicted RBP15.29■□□□□ 0.04
SMAD1-212ENST00000514168 KDM2BQ8NHM5 1336 aa15.28■□□□□ 0.04
SMAD1-212ENST00000514168 CHMP4AQ9BY43 222 aa15.28■□□□□ 0.04
SMAD1-212ENST00000514168 SCN7AQ01118 1682 aa15.28■□□□□ 0.04
SMAD1-212ENST00000514168 PRAMEF22A3QJZ6 481 aa15.27■□□□□ 0.04
SMAD1-212ENST00000514168 ZPR1O75312 459 aa15.27■□□□□ 0.04
SMAD1-212ENST00000514168 VAMP4O75379 141 aa15.27■□□□□ 0.04
SMAD1-212ENST00000514168 CT47B1P0C2W7 299 aaPredicted RBP15.27■□□□□ 0.04
SMAD1-212ENST00000514168 USP16Q9Y5T5 823 aa15.27■□□□□ 0.04
SMAD1-212ENST00000514168 ZC3H4Q9UPT8 1303 aaKnown RBP15.26■□□□□ 0.03
SMAD1-212ENST00000514168 STARD3NLO95772 234 aa15.26■□□□□ 0.03
SMAD1-212ENST00000514168 PCNTO95613 3336 aa15.25■□□□□ 0.03
SMAD1-212ENST00000514168 POTECB2RU33 542 aa15.25■□□□□ 0.03
SMAD1-212ENST00000514168 NFKBIEO00221 500 aa15.25■□□□□ 0.03
SMAD1-212ENST00000514168 SERPINB2P05120 415 aa15.25■□□□□ 0.03
SMAD1-212ENST00000514168 EIF2S2P20042 333 aaKnown RBP15.25■□□□□ 0.03
SMAD1-212ENST00000514168 EIF5P55010 431 aaKnown RBP15.25■□□□□ 0.03
SMAD1-212ENST00000514168 COL13A1Q5TAT6 717 aaPredicted RBP15.25■□□□□ 0.03
SMAD1-212ENST00000514168 HDGFL1Q5TGJ6 251 aa15.25■□□□□ 0.03
SMAD1-212ENST00000514168 ZNF428Q96B54 188 aa15.25■□□□□ 0.03
SMAD1-212ENST00000514168 GLTPD2A6NH11 291 aa15.24■□□□□ 0.03
SMAD1-212ENST00000514168 CCDC30Q5VVM6 783 aa15.24■□□□□ 0.03
SMAD1-212ENST00000514168 C16orf71Q8IYS4 520 aaPredicted RBP15.24■□□□□ 0.03
SMAD1-212ENST00000514168 CACNA1SQ13698 1873 aa15.23■□□□□ 0.03
SMAD1-212ENST00000514168 LMNB1P20700 586 aa15.23■□□□□ 0.03
SMAD1-212ENST00000514168 NECTIN2Q92692 538 aa15.23■□□□□ 0.03
SMAD1-212ENST00000514168 BCORQ6W2J9 1755 aa15.23■□□□□ 0.03
SMAD1-212ENST00000514168 ARFGEF2Q9Y6D5 1785 aa15.23■□□□□ 0.03
SMAD1-212ENST00000514168 SLX4Q8IY92 1834 aa15.22■□□□□ 0.03
SMAD1-212ENST00000514168 ERBB4Q15303 1308 aa15.22■□□□□ 0.03
SMAD1-212ENST00000514168 TTLL6Q8N841 843 aa15.22■□□□□ 0.03
SMAD1-212ENST00000514168 SMC1BQ8NDV3 1235 aa15.22■□□□□ 0.03
SMAD1-212ENST00000514168 STK31Q9BXU1 1019 aa15.22■□□□□ 0.03
SMAD1-212ENST00000514168 A1BGP04217 495 aa15.21■□□□□ 0.03
SMAD1-212ENST00000514168 ALDH1L2Q3SY69 923 aa15.21■□□□□ 0.03
SMAD1-212ENST00000514168 C2CD5Q86YS7 1000 aa15.21■□□□□ 0.03
SMAD1-212ENST00000514168 DBF4Q9UBU7 674 aaPredicted RBP15.21■□□□□ 0.03
SMAD1-212ENST00000514168 TCERG1O14776 1098 aaKnown RBP15.2■□□□□ 0.02
SMAD1-212ENST00000514168 CANXP27824 592 aaKnown RBP15.2■□□□□ 0.02
SMAD1-212ENST00000514168 TBC1D9BQ66K14 1250 aa15.2■□□□□ 0.02
SMAD1-212ENST00000514168 DDX21Q9NR30 783 aaKnown RBP eCLIP15.2■□□□□ 0.02
SMAD1-212ENST00000514168 CHPF2Q9P2E5 772 aa15.2■□□□□ 0.02
SMAD1-212ENST00000514168 VEGFAP15692 232 aaPredicted RBP15.19■□□□□ 0.02
SMAD1-212ENST00000514168 RARSP54136 660 aaKnown RBP15.19■□□□□ 0.02
SMAD1-212ENST00000514168 RCAN3Q9UKA8 241 aa15.19■□□□□ 0.02
SMAD1-212ENST00000514168 NBPF26B4DH59 902 aa15.18■□□□□ 0.02
SMAD1-212ENST00000514168 SLC4A2P04920 1241 aa15.18■□□□□ 0.02
SMAD1-212ENST00000514168 MYL6BP14649 208 aa15.18■□□□□ 0.02
SMAD1-212ENST00000514168 PDIA6Q15084 440 aa15.18■□□□□ 0.02
SMAD1-212ENST00000514168 NBPF10Q6P3W6 841 aaKnown RBP15.18■□□□□ 0.02
SMAD1-212ENST00000514168 NBPF15Q8N660 670 aa15.18■□□□□ 0.02
SMAD1-212ENST00000514168 SSH1Q8WYL5 1049 aa15.18■□□□□ 0.02
SMAD1-212ENST00000514168 SMC4Q9NTJ3 1288 aa15.18■□□□□ 0.02
SMAD1-212ENST00000514168 HYPKQ9NX55 129 aa15.18■□□□□ 0.02
SMAD1-212ENST00000514168 H0YIN7 160 aa15.17■□□□□ 0.02
SMAD1-212ENST00000514168 CENPBP07199 599 aaPredicted RBP15.17■□□□□ 0.02
SMAD1-212ENST00000514168 IL6STP40189 918 aaPredicted RBP15.17■□□□□ 0.02
SMAD1-212ENST00000514168 PIP4K2AP48426 406 aaPredicted RBP15.17■□□□□ 0.02
SMAD1-212ENST00000514168 PRR5LQ6MZQ0 368 aa15.17■□□□□ 0.02
SMAD1-212ENST00000514168 BICDL1Q6ZP65 573 aa15.17■□□□□ 0.02
SMAD1-212ENST00000514168 NPM2Q86SE8 214 aaKnown RBP15.17■□□□□ 0.02
SMAD1-212ENST00000514168 ANXA1P04083 346 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms