RNA–Protein interactions for RNA: ENST00000513996.5

HERC4-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-214ENST00000513996 PIM2Q9P1W9 311 aa11.47□□□□□ -0.57
HERC4-214ENST00000513996 KDM3BQ7LBC6 1761 aa11.46□□□□□ -0.57
HERC4-214ENST00000513996 CARMIL3Q8ND23 1372 aa11.46□□□□□ -0.57
HERC4-214ENST00000513996 LMOD3Q0VAK6 560 aa11.46□□□□□ -0.57
HERC4-214ENST00000513996 HLFQ16534 295 aa11.46□□□□□ -0.57
HERC4-214ENST00000513996 KRT24Q2M2I5 525 aa11.46□□□□□ -0.57
HERC4-214ENST00000513996 TTLL7Q6ZT98 887 aa11.46□□□□□ -0.57
HERC4-214ENST00000513996 NGEFQ8N5V2 710 aa11.46□□□□□ -0.57
HERC4-214ENST00000513996 BABAM1Q9NWV8 329 aa11.46□□□□□ -0.57
HERC4-214ENST00000513996 AFDNP55196 1824 aaKnown RBP11.46□□□□□ -0.58
HERC4-214ENST00000513996 EIF2S2P20042 333 aaKnown RBP11.45□□□□□ -0.58
HERC4-214ENST00000513996 PDIA6Q15084 440 aa11.45□□□□□ -0.58
HERC4-214ENST00000513996 PRR5LQ6MZQ0 368 aa11.45□□□□□ -0.58
HERC4-214ENST00000513996 CLEC4GQ6UXB4 293 aa11.45□□□□□ -0.58
HERC4-214ENST00000513996 ARHGAP27Q6ZUM4 889 aa11.45□□□□□ -0.58
HERC4-214ENST00000513996 LRP10Q7Z4F1 713 aa11.45□□□□□ -0.58
HERC4-214ENST00000513996 NPM2Q86SE8 214 aaKnown RBP11.45□□□□□ -0.58
HERC4-214ENST00000513996 SETDB2Q96T68 719 aa11.45□□□□□ -0.58
HERC4-214ENST00000513996 NRXN2Q9P2S2 1712 aa11.44□□□□□ -0.58
HERC4-214ENST00000513996 SENP3-EIF4A1A0A087X0R7 540 aa11.44□□□□□ -0.58
HERC4-214ENST00000513996 ANXA1P04083 346 aa11.44□□□□□ -0.58
HERC4-214ENST00000513996 MYL6BP14649 208 aa11.44□□□□□ -0.58
HERC4-214ENST00000513996 PROSER3Q2NL68 480 aa11.44□□□□□ -0.58
HERC4-214ENST00000513996 DALRD3Q5D0E6 543 aaKnown RBP11.44□□□□□ -0.58
HERC4-214ENST00000513996 C2CD5Q86YS7 1000 aa11.44□□□□□ -0.58
HERC4-214ENST00000513996 LAS1LQ9Y4W2 734 aaKnown RBP11.44□□□□□ -0.58
HERC4-214ENST00000513996 ZNF853P0CG23 659 aa11.43□□□□□ -0.58
HERC4-214ENST00000513996 NECTIN2Q92692 538 aa11.43□□□□□ -0.58
HERC4-214ENST00000513996 BRIP1Q9BX63 1249 aa11.43□□□□□ -0.58
HERC4-214ENST00000513996 ERVV-1B6SEH8 477 aa11.42□□□□□ -0.58
HERC4-214ENST00000513996 NIP7Q9Y221 180 aaKnown RBP eCLIP11.42□□□□□ -0.58
HERC4-214ENST00000513996 SCN7AQ01118 1682 aa11.42□□□□□ -0.58
HERC4-214ENST00000513996 BRCA1P38398 1863 aaKnown RBP11.42□□□□□ -0.58
HERC4-214ENST00000513996 ADCY9O60503 1353 aa11.41□□□□□ -0.58
HERC4-214ENST00000513996 MAP3K15Q6ZN16 1313 aa11.41□□□□□ -0.58
HERC4-214ENST00000513996 FAM177BA6PVY3 158 aa11.41□□□□□ -0.58
HERC4-214ENST00000513996 H0YIN7 160 aa11.41□□□□□ -0.58
HERC4-214ENST00000513996 RGL2O15211 777 aa11.41□□□□□ -0.58
HERC4-214ENST00000513996 ANP32CO43423 234 aa11.41□□□□□ -0.58
HERC4-214ENST00000513996 NBPF5PQ86XG9 351 aaPredicted RBP11.41□□□□□ -0.58
HERC4-214ENST00000513996 TTLL6Q8N841 843 aa11.41□□□□□ -0.58
HERC4-214ENST00000513996 CNBD1Q8NA66 436 aa11.41□□□□□ -0.58
HERC4-214ENST00000513996 CFAP44Q96MT7 982 aa11.41□□□□□ -0.58
HERC4-214ENST00000513996 ZBTB3Q9H5J0 574 aa11.41□□□□□ -0.58
HERC4-214ENST00000513996 MBIPQ9NS73 344 aa11.41□□□□□ -0.58
HERC4-214ENST00000513996 ZNF652Q9Y2D9 606 aa11.41□□□□□ -0.58
HERC4-214ENST00000513996 ERBB4Q15303 1308 aa11.4□□□□□ -0.58
HERC4-214ENST00000513996 PRELPP51888 382 aa11.4□□□□□ -0.58
HERC4-214ENST00000513996 ZNF622Q969S3 477 aaKnown RBP eCLIP11.4□□□□□ -0.58
HERC4-214ENST00000513996 MRS2Q9HD23 443 aa11.4□□□□□ -0.58
HERC4-214ENST00000513996 ATP10DQ9P241 1426 aa11.4□□□□□ -0.58
HERC4-214ENST00000513996 BCORQ6W2J9 1755 aa11.39□□□□□ -0.59
HERC4-214ENST00000513996 SPDYE4A6NLX3 237 aa11.39□□□□□ -0.59
HERC4-214ENST00000513996 SRGNP10124 158 aa11.39□□□□□ -0.59
HERC4-214ENST00000513996 PDE6BP35913 854 aa11.39□□□□□ -0.59
HERC4-214ENST00000513996 C9orf131Q5VYM1 1079 aa11.39□□□□□ -0.59
HERC4-214ENST00000513996 TPTE2Q6XPS3 522 aa11.39□□□□□ -0.59
HERC4-214ENST00000513996 COPS6Q7L5N1 327 aa11.39□□□□□ -0.59
HERC4-214ENST00000513996 ZNF34Q8IZ26 560 aa11.39□□□□□ -0.59
HERC4-214ENST00000513996 ANKRD31Q8N7Z5 1873 aa11.39□□□□□ -0.59
HERC4-214ENST00000513996 ZNF526Q8TF50 670 aaPredicted RBP11.39□□□□□ -0.59
HERC4-214ENST00000513996 LAMB4A4D0S4 1761 aa11.39□□□□□ -0.59
HERC4-214ENST00000513996 UBN2Q6ZU65 1347 aa11.38□□□□□ -0.59
HERC4-214ENST00000513996 KLRG2A4D1S0 409 aaPredicted RBP11.38□□□□□ -0.59
HERC4-214ENST00000513996 NPHP1O15259 732 aa11.38□□□□□ -0.59
HERC4-214ENST00000513996 GPTP24298 496 aa11.38□□□□□ -0.59
HERC4-214ENST00000513996 ST5P78524 1137 aa11.38□□□□□ -0.59
HERC4-214ENST00000513996 RASSF7Q02833 373 aa11.38□□□□□ -0.59
HERC4-214ENST00000513996 SUSD4Q5VX71 490 aa11.38□□□□□ -0.59
HERC4-214ENST00000513996 DUSP27Q5VZP5 1158 aa11.38□□□□□ -0.59
HERC4-214ENST00000513996 GIGYF2Q6Y7W6 1299 aaKnown RBP11.38□□□□□ -0.59
HERC4-214ENST00000513996 KIF6Q6ZMV9 814 aa11.38□□□□□ -0.59
HERC4-214ENST00000513996 XAGE3Q8WTP9 111 aa11.38□□□□□ -0.59
HERC4-214ENST00000513996 DDX21Q9NR30 783 aaKnown RBP eCLIP11.38□□□□□ -0.59
HERC4-214ENST00000513996 AIMP1Q12904 312 aaKnown RBP11.37□□□□□ -0.59
HERC4-214ENST00000513996 ERFEQ4G0M1 354 aa11.37□□□□□ -0.59
HERC4-214ENST00000513996 NUTM1Q86Y26 1132 aa11.37□□□□□ -0.59
HERC4-214ENST00000513996 C8orf58Q8NAV2 365 aa11.37□□□□□ -0.59
HERC4-214ENST00000513996 IFT57Q9NWB7 429 aa11.37□□□□□ -0.59
HERC4-214ENST00000513996 CHPF2Q9P2E5 772 aa11.37□□□□□ -0.59
HERC4-214ENST00000513996 PDZRN3Q9UPQ7 1066 aa11.37□□□□□ -0.59
HERC4-214ENST00000513996 ARFGEF1Q9Y6D6 1849 aa11.37□□□□□ -0.59
HERC4-214ENST00000513996 NFKBIEO00221 500 aa11.36□□□□□ -0.59
HERC4-214ENST00000513996 ELL2O00472 640 aaPredicted RBP11.36□□□□□ -0.59
HERC4-214ENST00000513996 C21orf2O43822 256 aa11.36□□□□□ -0.59
HERC4-214ENST00000513996 GNAI1P63096 354 aa11.36□□□□□ -0.59
HERC4-214ENST00000513996 HDGFL1Q5TGJ6 251 aa11.36□□□□□ -0.59
HERC4-214ENST00000513996 STYK1Q6J9G0 422 aa11.36□□□□□ -0.59
HERC4-214ENST00000513996 WWC1Q8IX03 1113 aa11.36□□□□□ -0.59
HERC4-214ENST00000513996 MASTLQ96GX5 879 aa11.36□□□□□ -0.59
HERC4-214ENST00000513996 GPBP1L1Q9HC44 474 aaPredicted RBP11.36□□□□□ -0.59
HERC4-214ENST00000513996 NUP98P52948 1817 aa11.35□□□□□ -0.59
HERC4-214ENST00000513996 SPDYE2BA6NHP3 402 aa11.35□□□□□ -0.59
HERC4-214ENST00000513996 NTSR2O95665 410 aa11.35□□□□□ -0.59
HERC4-214ENST00000513996 HOXB7P09629 217 aa11.35□□□□□ -0.59
HERC4-214ENST00000513996 SPDYE6P0CI01 402 aa11.35□□□□□ -0.59
HERC4-214ENST00000513996 C1QTNF8P60827 252 aa11.35□□□□□ -0.59
HERC4-214ENST00000513996 SPDYE2Q495Y8 402 aa11.35□□□□□ -0.59
HERC4-214ENST00000513996 C3orf67Q6ZVT6 689 aa11.35□□□□□ -0.59
HERC4-214ENST00000513996 SYNE4Q8N205 404 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 418.7 ms