RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 H7C1W4 665 aa7.59□□□□□ -1.19
CLDND1-228ENST00000513873 OIP5O43482 229 aa7.59□□□□□ -1.19
CLDND1-228ENST00000513873 ATG7O95352 703 aa7.59□□□□□ -1.19
CLDND1-228ENST00000513873 FHDC1Q9C0D6 1143 aaPredicted RBP7.59□□□□□ -1.19
CLDND1-228ENST00000513873 SEMA6BQ9H3T3 888 aa7.59□□□□□ -1.19
CLDND1-228ENST00000513873 WDR62O43379 1518 aa7.58□□□□□ -1.2
CLDND1-228ENST00000513873 GPR25O00155 361 aa7.58□□□□□ -1.2
CLDND1-228ENST00000513873 CSB-PGBD3P0DP91 1061 aa7.58□□□□□ -1.2
CLDND1-228ENST00000513873 MX2P20592 715 aa7.58□□□□□ -1.2
CLDND1-228ENST00000513873 PHKA2P46019 1235 aa7.58□□□□□ -1.2
CLDND1-228ENST00000513873 ELOAQ14241 798 aaKnown RBP7.58□□□□□ -1.2
CLDND1-228ENST00000513873 TNS4Q8IZW8 715 aa7.58□□□□□ -1.2
CLDND1-228ENST00000513873 AIDAQ96BJ3 306 aa7.58□□□□□ -1.2
CLDND1-228ENST00000513873 ZNF837Q96EG3 531 aaPredicted RBP7.58□□□□□ -1.2
CLDND1-228ENST00000513873 GAS2L1Q99501 681 aaPredicted RBP7.58□□□□□ -1.2
CLDND1-228ENST00000513873 CUEDC1Q9NWM3 386 aaPredicted RBP7.58□□□□□ -1.2
CLDND1-228ENST00000513873 MRC2Q9UBG0 1479 aa7.57□□□□□ -1.2
CLDND1-228ENST00000513873 GRIN2CQ14957 1233 aa7.57□□□□□ -1.2
CLDND1-228ENST00000513873 MTFR1Q15390 333 aa7.57□□□□□ -1.2
CLDND1-228ENST00000513873 RIPOR1Q6ZS17 1223 aa7.57□□□□□ -1.2
CLDND1-228ENST00000513873 TSEN2Q8NCE0 465 aaKnown RBP7.57□□□□□ -1.2
CLDND1-228ENST00000513873 SCHIP1Q9P0W5 487 aaPredicted RBP7.57□□□□□ -1.2
CLDND1-228ENST00000513873 ZNF232Q9UNY5 417 aa7.57□□□□□ -1.2
CLDND1-228ENST00000513873 ARHGEF11O15085 1522 aa7.57□□□□□ -1.2
CLDND1-228ENST00000513873 PLA2G4AP47712 749 aa7.56□□□□□ -1.2
CLDND1-228ENST00000513873 SNRPNP63162 240 aaKnown RBP7.56□□□□□ -1.2
CLDND1-228ENST00000513873 NBPF1Q3BBV0 1214 aa7.56□□□□□ -1.2
CLDND1-228ENST00000513873 C4orf17Q53FE4 359 aa7.56□□□□□ -1.2
CLDND1-228ENST00000513873 SLC9A9Q8IVB4 645 aa7.56□□□□□ -1.2
CLDND1-228ENST00000513873 PGBD3Q8N328 593 aa7.56□□□□□ -1.2
CLDND1-228ENST00000513873 DYRK1BQ9Y463 629 aa7.56□□□□□ -1.2
CLDND1-228ENST00000513873 A0A1B0GTH6 734 aa7.55□□□□□ -1.2
CLDND1-228ENST00000513873 PPP1R12BO60237 982 aaPredicted RBP7.55□□□□□ -1.2
CLDND1-228ENST00000513873 TATP17735 454 aaPredicted RBP7.55□□□□□ -1.2
CLDND1-228ENST00000513873 SRPK2P78362 688 aaKnown RBP7.55□□□□□ -1.2
CLDND1-228ENST00000513873 NBPF11Q86T75 865 aa7.55□□□□□ -1.2
CLDND1-228ENST00000513873 GAS2L2Q8NHY3 880 aa7.55□□□□□ -1.2
CLDND1-228ENST00000513873 CHMP7Q8WUX9 453 aaPredicted RBP7.55□□□□□ -1.2
CLDND1-228ENST00000513873 VTI1AQ96AJ9 217 aa7.55□□□□□ -1.2
CLDND1-228ENST00000513873 SERTM1A2A2V5 107 aa7.54□□□□□ -1.2
CLDND1-228ENST00000513873 F11P03951 625 aa7.54□□□□□ -1.2
CLDND1-228ENST00000513873 MAP2K3P46734 347 aa7.54□□□□□ -1.2
CLDND1-228ENST00000513873 PSMA6P60900 246 aaKnown RBP7.54□□□□□ -1.2
CLDND1-228ENST00000513873 PDE4CQ08493 712 aa7.54□□□□□ -1.2
CLDND1-228ENST00000513873 TBCELQ5QJ74 424 aa7.54□□□□□ -1.2
CLDND1-228ENST00000513873 CYB5RLQ6IPT4 315 aa7.54□□□□□ -1.2
CLDND1-228ENST00000513873 SCG3Q8WXD2 468 aaKnown RBP7.54□□□□□ -1.2
CLDND1-228ENST00000513873 OXCT2Q9BYC2 517 aaPredicted RBP7.54□□□□□ -1.2
CLDND1-228ENST00000513873 KRTAP9-9Q9BYP9 154 aa7.54□□□□□ -1.2
CLDND1-228ENST00000513873 KRTAP9-4Q9BYQ2 154 aa7.54□□□□□ -1.2
CLDND1-228ENST00000513873 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.54□□□□□ -1.2
CLDND1-228ENST00000513873 ATAD2Q6PL18 1390 aa7.54□□□□□ -1.2
CLDND1-228ENST00000513873 C1QTNF9BB2RNN3 333 aa7.53□□□□□ -1.2
CLDND1-228ENST00000513873 DKK1O94907 266 aa7.53□□□□□ -1.2
CLDND1-228ENST00000513873 COL8A1P27658 744 aa7.53□□□□□ -1.2
CLDND1-228ENST00000513873 SWI5Q1ZZU3 235 aa7.53□□□□□ -1.2
CLDND1-228ENST00000513873 C1orf216Q8TAB5 229 aa7.53□□□□□ -1.2
CLDND1-228ENST00000513873 GTPBP3Q969Y2 492 aaKnown RBP7.53□□□□□ -1.2
CLDND1-228ENST00000513873 ARXQ96QS3 562 aa7.53□□□□□ -1.2
CLDND1-228ENST00000513873 TSPAN10Q9H1Z9 355 aaPredicted RBP7.53□□□□□ -1.2
CLDND1-228ENST00000513873 NEUROD4Q9HD90 331 aa7.53□□□□□ -1.2
CLDND1-228ENST00000513873 BAZ1BQ9UIG0 1483 aaKnown RBP7.53□□□□□ -1.2
CLDND1-228ENST00000513873 NOS2P35228 1153 aa7.52□□□□□ -1.21
CLDND1-228ENST00000513873 EPHA4P54764 986 aa7.52□□□□□ -1.21
CLDND1-228ENST00000513873 TEAD4Q15561 434 aa7.52□□□□□ -1.21
CLDND1-228ENST00000513873 BICDL1Q6ZP65 573 aa7.52□□□□□ -1.21
CLDND1-228ENST00000513873 L3MBTL2Q969R5 705 aa7.52□□□□□ -1.21
CLDND1-228ENST00000513873 IQSEC3Q9UPP2 1182 aaPredicted RBP7.52□□□□□ -1.21
CLDND1-228ENST00000513873 GJA3Q9Y6H8 435 aa7.52□□□□□ -1.21
CLDND1-228ENST00000513873 SMARCA4P51532 1647 aa7.52□□□□□ -1.21
CLDND1-228ENST00000513873 IGFBP4P22692 258 aa7.51□□□□□ -1.21
CLDND1-228ENST00000513873 AMPD1P23109 780 aa7.51□□□□□ -1.21
CLDND1-228ENST00000513873 MSX1P28360 303 aa7.51□□□□□ -1.21
CLDND1-228ENST00000513873 ARSJQ5FYB0 599 aaPredicted RBP7.51□□□□□ -1.21
CLDND1-228ENST00000513873 EFHC2Q5JST6 749 aa7.51□□□□□ -1.21
CLDND1-228ENST00000513873 STK32AQ8WU08 396 aa7.51□□□□□ -1.21
CLDND1-228ENST00000513873 GOLGA2P5Q9HBQ8 144 aa7.51□□□□□ -1.21
CLDND1-228ENST00000513873 GPAMQ9HCL2 828 aa7.51□□□□□ -1.21
CLDND1-228ENST00000513873 ZFP64Q9NPA5 681 aa7.51□□□□□ -1.21
CLDND1-228ENST00000513873 PARP3Q9Y6F1 533 aa7.51□□□□□ -1.21
CLDND1-228ENST00000513873 KRTAP4-8A0A0G2JLE6 195 aa7.5□□□□□ -1.21
CLDND1-228ENST00000513873 LGR5O75473 907 aa7.5□□□□□ -1.21
CLDND1-228ENST00000513873 DBN1Q16643 649 aa7.5□□□□□ -1.21
CLDND1-228ENST00000513873 TMEM164Q5U3C3 297 aa7.5□□□□□ -1.21
CLDND1-228ENST00000513873 NOP53Q9NZM5 478 aaKnown RBP7.5□□□□□ -1.21
CLDND1-228ENST00000513873 ZMIZ1Q9ULJ6 1067 aa7.5□□□□□ -1.21
CLDND1-228ENST00000513873 PRMT3O60678 531 aa7.49□□□□□ -1.21
CLDND1-228ENST00000513873 DOC2BQ14184 412 aa7.49□□□□□ -1.21
CLDND1-228ENST00000513873 CD163Q86VB7 1156 aa7.49□□□□□ -1.21
CLDND1-228ENST00000513873 STAG2Q8N3U4 1231 aa7.49□□□□□ -1.21
CLDND1-228ENST00000513873 NUCKS1Q9H1E3 243 aaKnown RBP7.49□□□□□ -1.21
CLDND1-228ENST00000513873 ZDHHC3Q9NYG2 299 aa7.49□□□□□ -1.21
CLDND1-228ENST00000513873 GDF2Q9UK05 429 aaPredicted RBP7.49□□□□□ -1.21
CLDND1-228ENST00000513873 USP3Q9Y6I4 520 aa7.49□□□□□ -1.21
CLDND1-228ENST00000513873 CADPSQ9ULU8 1353 aa7.48□□□□□ -1.21
CLDND1-228ENST00000513873 GNB5O14775 395 aa7.48□□□□□ -1.21
CLDND1-228ENST00000513873 LBRQ14739 615 aaKnown RBP7.48□□□□□ -1.21
CLDND1-228ENST00000513873 PRIMPOLQ96LW4 560 aa7.48□□□□□ -1.21
CLDND1-228ENST00000513873 PEG3Q9GZU2 1588 aa7.48□□□□□ -1.21
CLDND1-228ENST00000513873 HCN4Q9Y3Q4 1203 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms