RNA–Protein interactions for RNA: ENST00000513677.5

GYPB-215, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 221 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-215ENST00000513677 LARP1Q6PKG0 1096 aaKnown RBP8.45□□□□□ -1.06
GYPB-215ENST00000513677 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.45□□□□□ -1.06
GYPB-215ENST00000513677 NUP188Q5SRE5 1749 aa8.45□□□□□ -1.06
GYPB-215ENST00000513677 DISP2A7MBM2 1401 aa8.45□□□□□ -1.06
GYPB-215ENST00000513677 RREB1Q92766 1687 aa8.44□□□□□ -1.06
GYPB-215ENST00000513677 ARHGEF28Q8N1W1 1705 aaKnown RBP8.44□□□□□ -1.06
GYPB-215ENST00000513677 PPEF1O14829 653 aaPredicted RBP8.44□□□□□ -1.06
GYPB-215ENST00000513677 SKIV2LQ15477 1246 aaKnown RBP8.44□□□□□ -1.06
GYPB-215ENST00000513677 RETREG3Q86VR2 466 aa8.44□□□□□ -1.06
GYPB-215ENST00000513677 SSH2Q76I76 1423 aa8.44□□□□□ -1.06
GYPB-215ENST00000513677 RNF223E7ERA6 249 aa8.43□□□□□ -1.06
GYPB-215ENST00000513677 QPCTQ16769 361 aa8.43□□□□□ -1.06
GYPB-215ENST00000513677 ABTB2Q8N961 1025 aa8.43□□□□□ -1.06
GYPB-215ENST00000513677 CDK19Q9BWU1 502 aa8.43□□□□□ -1.06
GYPB-215ENST00000513677 ZBTB3Q9H5J0 574 aa8.43□□□□□ -1.06
GYPB-215ENST00000513677 ACEP12821 1306 aa8.43□□□□□ -1.06
GYPB-215ENST00000513677 ATP7BP35670 1465 aa8.43□□□□□ -1.06
GYPB-215ENST00000513677 TUSC1Q2TAM9 212 aa8.42□□□□□ -1.06
GYPB-215ENST00000513677 PRPF38BQ5VTL8 546 aaKnown RBP8.42□□□□□ -1.06
GYPB-215ENST00000513677 TCP11L2Q8N4U5 519 aa8.42□□□□□ -1.06
GYPB-215ENST00000513677 PROCA1Q8NCQ7 364 aaPredicted RBP8.42□□□□□ -1.06
GYPB-215ENST00000513677 SPON1Q9HCB6 807 aa8.42□□□□□ -1.06
GYPB-215ENST00000513677 RAB3GAP2Q9H2M9 1393 aa8.42□□□□□ -1.06
GYPB-215ENST00000513677 NRKQ7Z2Y5 1582 aa8.42□□□□□ -1.06
GYPB-215ENST00000513677 CAMTA1Q9Y6Y1 1673 aa8.42□□□□□ -1.06
GYPB-215ENST00000513677 PARD3Q8TEW0 1356 aa8.41□□□□□ -1.06
GYPB-215ENST00000513677 TOPAZ1Q8N9V7 1692 aa8.4□□□□□ -1.06
GYPB-215ENST00000513677 SPDYE5A6NIY4 337 aa8.4□□□□□ -1.06
GYPB-215ENST00000513677 KCNQ2O43526 872 aa8.4□□□□□ -1.06
GYPB-215ENST00000513677 LILRB3O75022 631 aa8.4□□□□□ -1.06
GYPB-215ENST00000513677 SRPK2P78362 688 aaKnown RBP8.4□□□□□ -1.06
GYPB-215ENST00000513677 PRR7Q8TB68 274 aa8.4□□□□□ -1.06
GYPB-215ENST00000513677 GOPCQ9HD26 462 aa8.4□□□□□ -1.06
GYPB-215ENST00000513677 CFAP99D6REC4 459 aa8.39□□□□□ -1.07
GYPB-215ENST00000513677 DXOO77932 396 aaKnown RBP8.39□□□□□ -1.07
GYPB-215ENST00000513677 GCP02774 474 aa8.39□□□□□ -1.07
GYPB-215ENST00000513677 JUNDP17535 347 aa8.39□□□□□ -1.07
GYPB-215ENST00000513677 MMP16P51512 607 aa8.39□□□□□ -1.07
GYPB-215ENST00000513677 ANKLE1Q8NAG6 615 aa8.39□□□□□ -1.07
GYPB-215ENST00000513677 PCMTD1Q96MG8 357 aaPredicted RBP8.39□□□□□ -1.07
GYPB-215ENST00000513677 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.39□□□□□ -1.07
GYPB-215ENST00000513677 FCF1Q9Y324 198 aaKnown RBP8.39□□□□□ -1.07
GYPB-215ENST00000513677 LMO7Q8WWI1 1683 aa8.39□□□□□ -1.07
GYPB-215ENST00000513677 PARP4Q9UKK3 1724 aaKnown RBP8.38□□□□□ -1.07
GYPB-215ENST00000513677 ZBTB7AO95365 584 aa8.38□□□□□ -1.07
GYPB-215ENST00000513677 RTL5Q5HYW3 569 aaPredicted RBP8.38□□□□□ -1.07
GYPB-215ENST00000513677 TOM1L2Q6ZVM7 507 aa8.38□□□□□ -1.07
GYPB-215ENST00000513677 NLRP13Q86W25 1043 aa8.38□□□□□ -1.07
GYPB-215ENST00000513677 COL5A2P05997 1499 aaPredicted RBP8.38□□□□□ -1.07
GYPB-215ENST00000513677 OVOS2A0A0G2JMS6 1433 aa8.37□□□□□ -1.07
GYPB-215ENST00000513677 OVOS2A0A0J9YW53 1432 aa8.37□□□□□ -1.07
GYPB-215ENST00000513677 OVOS2Q6IE36 1432 aa8.37□□□□□ -1.07
GYPB-215ENST00000513677 PPIP5K1Q6PFW1 1433 aa8.37□□□□□ -1.07
GYPB-215ENST00000513677 POLR3AO14802 1390 aaPredicted RBP8.37□□□□□ -1.07
GYPB-215ENST00000513677 LRRC37A3O60309 1634 aa8.37□□□□□ -1.07
GYPB-215ENST00000513677 DDB1Q16531 1140 aa8.37□□□□□ -1.07
GYPB-215ENST00000513677 PTF1AQ7RTS3 328 aa8.37□□□□□ -1.07
GYPB-215ENST00000513677 TSC1Q92574 1164 aa8.37□□□□□ -1.07
GYPB-215ENST00000513677 PDGFDQ9GZP0 370 aaPredicted RBP8.37□□□□□ -1.07
GYPB-215ENST00000513677 THRAP3Q9Y2W1 955 aaKnown RBP8.37□□□□□ -1.07
GYPB-215ENST00000513677 CRB1P82279 1406 aa8.37□□□□□ -1.07
GYPB-215ENST00000513677 NINLQ9Y2I6 1382 aa8.36□□□□□ -1.07
GYPB-215ENST00000513677 SBF2Q86WG5 1849 aa8.36□□□□□ -1.07
GYPB-215ENST00000513677 USP19O94966 1318 aa8.36□□□□□ -1.07
GYPB-215ENST00000513677 CSB-PGBD3P0DP91 1061 aa8.36□□□□□ -1.07
GYPB-215ENST00000513677 NBPF1Q3BBV0 1214 aa8.36□□□□□ -1.07
GYPB-215ENST00000513677 CPDO75976 1380 aa8.35□□□□□ -1.07
GYPB-215ENST00000513677 AKAP12Q02952 1782 aa8.35□□□□□ -1.07
GYPB-215ENST00000513677 MYOM1P52179 1685 aa8.35□□□□□ -1.07
GYPB-215ENST00000513677 QRICH2Q9H0J4 1663 aa8.35□□□□□ -1.07
GYPB-215ENST00000513677 PLA2G2CQ5R387 149 aa8.35□□□□□ -1.07
GYPB-215ENST00000513677 CCDC24Q8N4L8 307 aa8.35□□□□□ -1.07
GYPB-215ENST00000513677 RGPD5Q99666 1765 aa8.35□□□□□ -1.07
GYPB-215ENST00000513677 PEAK1Q9H792 1746 aa8.34□□□□□ -1.07
GYPB-215ENST00000513677 WNK3Q9BYP7 1800 aa8.34□□□□□ -1.07
GYPB-215ENST00000513677 DESI1Q6ICB0 168 aa8.34□□□□□ -1.07
GYPB-215ENST00000513677 NUDT12Q9BQG2 462 aa8.34□□□□□ -1.07
GYPB-215ENST00000513677 PRKD2Q9BZL6 878 aa8.34□□□□□ -1.07
GYPB-215ENST00000513677 STK32BQ9NY57 414 aa8.34□□□□□ -1.07
GYPB-215ENST00000513677 CABP1Q9NZU7 370 aa8.34□□□□□ -1.07
GYPB-215ENST00000513677 CASZ1Q86V15 1759 aa8.34□□□□□ -1.07
GYPB-215ENST00000513677 CENPJQ9HC77 1338 aaPredicted RBP8.33□□□□□ -1.08
GYPB-215ENST00000513677 C11orf95C9JLR9 678 aaPredicted RBP8.33□□□□□ -1.08
GYPB-215ENST00000513677 PLSCR1O15162 318 aa8.33□□□□□ -1.08
GYPB-215ENST00000513677 PTPRNQ16849 979 aa8.33□□□□□ -1.08
GYPB-215ENST00000513677 PPP2R2DQ66LE6 453 aa8.33□□□□□ -1.08
GYPB-215ENST00000513677 MARCH10Q8NA82 808 aaPredicted RBP8.33□□□□□ -1.08
GYPB-215ENST00000513677 HELBQ8NG08 1087 aaPredicted RBP8.33□□□□□ -1.08
GYPB-215ENST00000513677 EMID1Q96A84 441 aaPredicted RBP8.33□□□□□ -1.08
GYPB-215ENST00000513677 RGPD3A6NKT7 1758 aaPredicted RBP8.33□□□□□ -1.08
GYPB-215ENST00000513677 RGPD4Q7Z3J3 1758 aa8.33□□□□□ -1.08
GYPB-215ENST00000513677 KIAA1210Q9ULL0 1709 aa8.32□□□□□ -1.08
GYPB-215ENST00000513677 USP6P35125 1406 aa8.32□□□□□ -1.08
GYPB-215ENST00000513677 RGS20O76081 388 aa8.32□□□□□ -1.08
GYPB-215ENST00000513677 ACSBG1Q96GR2 724 aa8.32□□□□□ -1.08
GYPB-215ENST00000513677 PIK3C2AO00443 1686 aa8.32□□□□□ -1.08
GYPB-215ENST00000513677 AATKQ6ZMQ8 1374 aa8.32□□□□□ -1.08
GYPB-215ENST00000513677 WDR17Q8IZU2 1322 aa8.31□□□□□ -1.08
GYPB-215ENST00000513677 SLIT3O75094 1523 aa8.31□□□□□ -1.08
GYPB-215ENST00000513677 SENP3-EIF4A1A0A087X0R7 540 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms