RNA–Protein interactions for RNA: ENST00000513433.1

SNX25-206, Transcript of sorting nexin 25, humanhuman

TSL 3

Gene SNX25, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-206ENST00000513433 DCDC2BA2VCK2 349 aa9.28□□□□□ -0.92
SNX25-206ENST00000513433 NEURL1BA8MQ27 555 aa9.28□□□□□ -0.92
SNX25-206ENST00000513433 KHNYNO15037 678 aaKnown RBP9.28□□□□□ -0.92
SNX25-206ENST00000513433 CD33P20138 364 aa9.28□□□□□ -0.92
SNX25-206ENST00000513433 CCDC102BQ68D86 513 aa9.28□□□□□ -0.92
SNX25-206ENST00000513433 PARP3Q9Y6F1 533 aa9.28□□□□□ -0.92
SNX25-206ENST00000513433 PALM3A6NDB9 673 aaPredicted RBP9.27□□□□□ -0.93
SNX25-206ENST00000513433 GNB5O14775 395 aa9.27□□□□□ -0.93
SNX25-206ENST00000513433 TMEM132AQ24JP5 1023 aa9.27□□□□□ -0.93
SNX25-206ENST00000513433 TPCN2Q8NHX9 752 aa9.27□□□□□ -0.93
SNX25-206ENST00000513433 STRN4Q9NRL3 753 aa9.27□□□□□ -0.93
SNX25-206ENST00000513433 MARK1Q9P0L2 795 aa9.27□□□□□ -0.93
SNX25-206ENST00000513433 SERTM1A2A2V5 107 aa9.26□□□□□ -0.93
SNX25-206ENST00000513433 PSMA6P60900 246 aaKnown RBP9.26□□□□□ -0.93
SNX25-206ENST00000513433 RRAGCQ9HB90 399 aa9.26□□□□□ -0.93
SNX25-206ENST00000513433 BICDL1Q6ZP65 573 aa9.25□□□□□ -0.93
SNX25-206ENST00000513433 CHSY3Q70JA7 882 aa9.25□□□□□ -0.93
SNX25-206ENST00000513433 STAG2Q8N3U4 1231 aa9.25□□□□□ -0.93
SNX25-206ENST00000513433 OGFOD1Q8N543 542 aa9.25□□□□□ -0.93
SNX25-206ENST00000513433 SUV39H2Q9H5I1 410 aa9.25□□□□□ -0.93
SNX25-206ENST00000513433 MKRN1Q9UHC7 482 aaKnown RBP9.25□□□□□ -0.93
SNX25-206ENST00000513433 GJA3Q9Y6H8 435 aa9.25□□□□□ -0.93
SNX25-206ENST00000513433 AMPD1P23109 780 aa9.24□□□□□ -0.93
SNX25-206ENST00000513433 KCNQ4P56696 695 aa9.23□□□□□ -0.93
SNX25-206ENST00000513433 SH3PXD2AQ5TCZ1 1133 aa9.23□□□□□ -0.93
SNX25-206ENST00000513433 TSPAN10Q9H1Z9 355 aaPredicted RBP9.23□□□□□ -0.93
SNX25-206ENST00000513433 NOP53Q9NZM5 478 aaKnown RBP9.23□□□□□ -0.93
SNX25-206ENST00000513433 ADARB2-AS1A8MUL3 147 aa9.22□□□□□ -0.93
SNX25-206ENST00000513433 C21orf2O43822 256 aa9.22□□□□□ -0.93
SNX25-206ENST00000513433 ADAM23O75077 832 aa9.22□□□□□ -0.93
SNX25-206ENST00000513433 SIN3BO75182 1162 aa9.22□□□□□ -0.93
SNX25-206ENST00000513433 TBCELQ5QJ74 424 aa9.22□□□□□ -0.93
SNX25-206ENST00000513433 LRRC69Q6ZNQ3 347 aa9.22□□□□□ -0.93
SNX25-206ENST00000513433 GAS2L2Q8NHY3 880 aa9.22□□□□□ -0.93
SNX25-206ENST00000513433 ELOA3CA0A087WX78 387 aaPredicted RBP9.21□□□□□ -0.94
SNX25-206ENST00000513433 A6NJR5 290 aa9.21□□□□□ -0.94
SNX25-206ENST00000513433 ELOA3DA6NLF2 546 aaPredicted RBP9.21□□□□□ -0.94
SNX25-206ENST00000513433 ELOA3BQ3SY89 546 aa9.21□□□□□ -0.94
SNX25-206ENST00000513433 PROSER2Q86WR7 435 aaPredicted RBP9.21□□□□□ -0.94
SNX25-206ENST00000513433 ELOA3Q8NG57 546 aa9.21□□□□□ -0.94
SNX25-206ENST00000513433 ZNF232Q9UNY5 417 aa9.21□□□□□ -0.94
SNX25-206ENST00000513433 MAFBQ9Y5Q3 323 aaPredicted RBP9.21□□□□□ -0.94
SNX25-206ENST00000513433 PCBP4P57723 403 aaKnown RBP9.2□□□□□ -0.94
SNX25-206ENST00000513433 GLMNQ92990 594 aa9.2□□□□□ -0.94
SNX25-206ENST00000513433 TNFRSF25Q93038 417 aa9.2□□□□□ -0.94
SNX25-206ENST00000513433 CLUAP1Q96AJ1 413 aa9.2□□□□□ -0.94
SNX25-206ENST00000513433 ANKIB1Q9P2G1 1089 aa9.2□□□□□ -0.94
SNX25-206ENST00000513433 PRR12Q9ULL5 1215 aa9.2□□□□□ -0.94
SNX25-206ENST00000513433 RHPN1Q8TCX5 695 aa9.19□□□□□ -0.94
SNX25-206ENST00000513433 SFSWAPQ12872 951 aaKnown RBP9.18□□□□□ -0.94
SNX25-206ENST00000513433 GRIN2CQ14957 1233 aa9.18□□□□□ -0.94
SNX25-206ENST00000513433 SYT9Q86SS6 491 aa9.18□□□□□ -0.94
SNX25-206ENST00000513433 TSEN2Q8NCE0 465 aaKnown RBP9.18□□□□□ -0.94
SNX25-206ENST00000513433 C2orf49Q9BVC5 232 aaPredicted RBP9.18□□□□□ -0.94
SNX25-206ENST00000513433 PRDM6Q9NQX0 595 aa9.18□□□□□ -0.94
SNX25-206ENST00000513433 TFIP11Q9UBB9 837 aaKnown RBP9.18□□□□□ -0.94
SNX25-206ENST00000513433 BAG6P46379 1132 aa9.17□□□□□ -0.94
SNX25-206ENST00000513433 TRIM11Q96F44 468 aa9.17□□□□□ -0.94
SNX25-206ENST00000513433 SLC30A3Q99726 388 aa9.17□□□□□ -0.94
SNX25-206ENST00000513433 PHACTR1Q9C0D0 580 aa9.17□□□□□ -0.94
SNX25-206ENST00000513433 NEUROD4Q9HD90 331 aa9.17□□□□□ -0.94
SNX25-206ENST00000513433 CHMP3Q9Y3E7 222 aa9.17□□□□□ -0.94
SNX25-206ENST00000513433 SFI1A8K8P3 1242 aa9.16□□□□□ -0.94
SNX25-206ENST00000513433 SEC13P55735 322 aa9.16□□□□□ -0.94
SNX25-206ENST00000513433 COL9A3Q14050 684 aaPredicted RBP9.16□□□□□ -0.94
SNX25-206ENST00000513433 KANK4Q5T7N3 995 aaPredicted RBP9.16□□□□□ -0.94
SNX25-206ENST00000513433 CD163Q86VB7 1156 aa9.16□□□□□ -0.94
SNX25-206ENST00000513433 SUSD3Q96L08 255 aa9.16□□□□□ -0.94
SNX25-206ENST00000513433 ATAD2Q6PL18 1390 aa9.15□□□□□ -0.94
SNX25-206ENST00000513433 C1QTNF9BB2RNN3 333 aa9.15□□□□□ -0.94
SNX25-206ENST00000513433 RASA1P20936 1047 aa9.15□□□□□ -0.94
SNX25-206ENST00000513433 TYRO3Q06418 890 aa9.15□□□□□ -0.94
SNX25-206ENST00000513433 ZNF594Q96JF6 807 aaPredicted RBP9.15□□□□□ -0.94
SNX25-206ENST00000513433 PPP1R12CQ9BZL4 782 aa9.15□□□□□ -0.94
SNX25-206ENST00000513433 HCN4Q9Y3Q4 1203 aa9.15□□□□□ -0.94
SNX25-206ENST00000513433 PPP1R12BO60237 982 aaPredicted RBP9.14□□□□□ -0.95
SNX25-206ENST00000513433 ALAS2P22557 587 aa9.14□□□□□ -0.95
SNX25-206ENST00000513433 SPEM2Q0P670 501 aa9.14□□□□□ -0.95
SNX25-206ENST00000513433 PTK7Q13308 1070 aa9.14□□□□□ -0.95
SNX25-206ENST00000513433 IER5Q5VY09 327 aa9.14□□□□□ -0.95
SNX25-206ENST00000513433 EFCC1Q9HA90 598 aa9.14□□□□□ -0.95
SNX25-206ENST00000513433 BRD7Q9NPI1 651 aa9.14□□□□□ -0.95
SNX25-206ENST00000513433 STARD13Q9Y3M8 1113 aa9.14□□□□□ -0.95
SNX25-206ENST00000513433 HIF1AQ16665 826 aa9.13□□□□□ -0.95
SNX25-206ENST00000513433 ALDH16A1Q8IZ83 802 aa9.13□□□□□ -0.95
SNX25-206ENST00000513433 ZNF280CQ8ND82 737 aa9.13□□□□□ -0.95
SNX25-206ENST00000513433 KCNH4Q9UQ05 1017 aa9.13□□□□□ -0.95
SNX25-206ENST00000513433 RBM19Q9Y4C8 960 aaKnown RBP9.13□□□□□ -0.95
SNX25-206ENST00000513433 UNC13AQ9UPW8 1703 aa9.13□□□□□ -0.95
SNX25-206ENST00000513433 FAM196BA6NMK8 535 aa9.12□□□□□ -0.95
SNX25-206ENST00000513433 CHRNA4P43681 627 aa9.12□□□□□ -0.95
SNX25-206ENST00000513433 HSH2DQ96JZ2 352 aa9.12□□□□□ -0.95
SNX25-206ENST00000513433 PLVAPQ9BX97 442 aa9.12□□□□□ -0.95
SNX25-206ENST00000513433 K7ELQ4 463 aaPredicted RBP9.11□□□□□ -0.95
SNX25-206ENST00000513433 SPATA31C1P0DKV0 1188 aa9.11□□□□□ -0.95
SNX25-206ENST00000513433 IGFBP4P22692 258 aa9.11□□□□□ -0.95
SNX25-206ENST00000513433 CRTC2Q53ET0 693 aaPredicted RBP9.11□□□□□ -0.95
SNX25-206ENST00000513433 LARP1Q6PKG0 1096 aaKnown RBP9.11□□□□□ -0.95
SNX25-206ENST00000513433 C20orf204Q6ZNR8 217 aa9.11□□□□□ -0.95
SNX25-206ENST00000513433 SCG3Q8WXD2 468 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms