RNA–Protein interactions for RNA: ENST00000513266.5

PTPN20-228, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-228ENST00000513266 CNKSR1Q969H4 720 aa13.45□□□□□ -0.26
PTPN20-228ENST00000513266 ZIC5Q96T25 663 aa13.45□□□□□ -0.26
PTPN20-228ENST00000513266 FZD9O00144 591 aa13.44□□□□□ -0.26
PTPN20-228ENST00000513266 HSP90AB1P08238 724 aaKnown RBP13.44□□□□□ -0.26
PTPN20-228ENST00000513266 FXR1P51114 621 aaKnown RBP eCLIP13.44□□□□□ -0.26
PTPN20-228ENST00000513266 PRR5LQ6MZQ0 368 aa13.44□□□□□ -0.26
PTPN20-228ENST00000513266 NBPF15Q8N660 670 aa13.44□□□□□ -0.26
PTPN20-228ENST00000513266 ZNF277Q9NRM2 450 aaPredicted RBP13.44□□□□□ -0.26
PTPN20-228ENST00000513266 CYP19A1P11511 503 aaPredicted RBP13.43□□□□□ -0.26
PTPN20-228ENST00000513266 STYK1Q6J9G0 422 aa13.43□□□□□ -0.26
PTPN20-228ENST00000513266 GPC2Q8N158 579 aa13.43□□□□□ -0.26
PTPN20-228ENST00000513266 NFATC2IPQ8NCF5 419 aa13.43□□□□□ -0.26
PTPN20-228ENST00000513266 HHIPL1Q96JK4 782 aa13.43□□□□□ -0.26
PTPN20-228ENST00000513266 ZBTB1Q9Y2K1 713 aa13.43□□□□□ -0.26
PTPN20-228ENST00000513266 WASHC2AQ641Q2 1341 aa13.42□□□□□ -0.26
PTPN20-228ENST00000513266 PPM1GO15355 546 aaPredicted RBP13.42□□□□□ -0.26
PTPN20-228ENST00000513266 SRGNP10124 158 aa13.42□□□□□ -0.26
PTPN20-228ENST00000513266 FKBP4Q02790 459 aaKnown RBP eCLIP13.42□□□□□ -0.26
PTPN20-228ENST00000513266 TBC1D9BQ66K14 1250 aa13.42□□□□□ -0.26
PTPN20-228ENST00000513266 COL4A5P29400 1685 aa13.42□□□□□ -0.26
PTPN20-228ENST00000513266 CUL9Q8IWT3 2517 aa13.42□□□□□ -0.26
PTPN20-228ENST00000513266 CCDC93Q567U6 631 aa13.41□□□□□ -0.26
PTPN20-228ENST00000513266 CARD11Q9BXL7 1154 aa13.41□□□□□ -0.26
PTPN20-228ENST00000513266 MKI67P46013 3256 aaKnown RBP13.41□□□□□ -0.26
PTPN20-228ENST00000513266 DLL1O00548 723 aa13.4□□□□□ -0.26
PTPN20-228ENST00000513266 EPS15P42566 896 aa13.4□□□□□ -0.26
PTPN20-228ENST00000513266 SCNN1DP51172 638 aa13.4□□□□□ -0.26
PTPN20-228ENST00000513266 ZNF530Q6P9A1 599 aaPredicted RBP13.4□□□□□ -0.26
PTPN20-228ENST00000513266 OLFM4Q6UX06 510 aa13.4□□□□□ -0.26
PTPN20-228ENST00000513266 ST20-MTHFSA0A0A6YYL1 179 aa13.39□□□□□ -0.27
PTPN20-228ENST00000513266 CELF2O95319 508 aaKnown RBP13.39□□□□□ -0.27
PTPN20-228ENST00000513266 MTHFSP49914 203 aa13.39□□□□□ -0.27
PTPN20-228ENST00000513266 MASTLQ96GX5 879 aa13.39□□□□□ -0.27
PTPN20-228ENST00000513266 TESK2Q96S53 571 aa13.39□□□□□ -0.27
PTPN20-228ENST00000513266 HPS5Q9UPZ3 1129 aa13.39□□□□□ -0.27
PTPN20-228ENST00000513266 LMOD1P29536 600 aaPredicted RBP13.38□□□□□ -0.27
PTPN20-228ENST00000513266 IARSP41252 1262 aaKnown RBP13.38□□□□□ -0.27
PTPN20-228ENST00000513266 NOGQ13253 232 aa13.38□□□□□ -0.27
PTPN20-228ENST00000513266 GJA3Q9Y6H8 435 aa13.38□□□□□ -0.27
PTPN20-228ENST00000513266 UBR2Q8IWV8 1755 aa13.37□□□□□ -0.27
PTPN20-228ENST00000513266 TRIOBPQ9H2D6 2365 aa13.37□□□□□ -0.27
PTPN20-228ENST00000513266 EIF4A2Q14240 407 aaKnown RBP13.37□□□□□ -0.27
PTPN20-228ENST00000513266 PLEKHO1Q53GL0 409 aaPredicted RBP13.37□□□□□ -0.27
PTPN20-228ENST00000513266 USP50Q70EL3 339 aaPredicted RBP13.37□□□□□ -0.27
PTPN20-228ENST00000513266 CTU1Q7Z7A3 348 aaKnown RBP13.37□□□□□ -0.27
PTPN20-228ENST00000513266 SAGE1Q9NXZ1 904 aa13.37□□□□□ -0.27
PTPN20-228ENST00000513266 SZT2Q5T011 3432 aa13.37□□□□□ -0.27
PTPN20-228ENST00000513266 POLR2AP24928 1970 aaKnown RBP13.36□□□□□ -0.27
PTPN20-228ENST00000513266 CNBD1Q8NA66 436 aa13.36□□□□□ -0.27
PTPN20-228ENST00000513266 SNED1Q8TER0 1413 aa13.36□□□□□ -0.27
PTPN20-228ENST00000513266 CANXP27824 592 aaKnown RBP13.35□□□□□ -0.27
PTPN20-228ENST00000513266 EIF5P55010 431 aaKnown RBP13.35□□□□□ -0.27
PTPN20-228ENST00000513266 SYNE4Q8N205 404 aa13.35□□□□□ -0.27
PTPN20-228ENST00000513266 SIN3AQ96ST3 1273 aa13.35□□□□□ -0.27
PTPN20-228ENST00000513266 GLIS2Q9BZE0 524 aaPredicted RBP13.35□□□□□ -0.27
PTPN20-228ENST00000513266 RTKN2Q8IZC4 609 aa13.34□□□□□ -0.27
PTPN20-228ENST00000513266 RNF186Q9NXI6 227 aa13.34□□□□□ -0.27
PTPN20-228ENST00000513266 A0A0C4DFX4 3053 aa13.33□□□□□ -0.27
PTPN20-228ENST00000513266 CEP290O15078 2479 aa13.33□□□□□ -0.28
PTPN20-228ENST00000513266 FAM155AB1AL88 458 aaPredicted RBP13.33□□□□□ -0.28
PTPN20-228ENST00000513266 TRPA1O75762 1119 aa13.33□□□□□ -0.28
PTPN20-228ENST00000513266 EIF6P56537 245 aaKnown RBP13.33□□□□□ -0.28
PTPN20-228ENST00000513266 AMOTQ4VCS5 1084 aa13.33□□□□□ -0.28
PTPN20-228ENST00000513266 JDP2Q8WYK2 163 aa13.33□□□□□ -0.28
PTPN20-228ENST00000513266 POLKQ9UBT6 870 aa13.33□□□□□ -0.28
PTPN20-228ENST00000513266 MRC1P22897 1456 aa13.32□□□□□ -0.28
PTPN20-228ENST00000513266 NPR1P16066 1061 aa13.32□□□□□ -0.28
PTPN20-228ENST00000513266 ST5P78524 1137 aa13.32□□□□□ -0.28
PTPN20-228ENST00000513266 SLC39A6Q13433 755 aa13.32□□□□□ -0.28
PTPN20-228ENST00000513266 AKAP4Q5JQC9 854 aa13.32□□□□□ -0.28
PTPN20-228ENST00000513266 C1orf141Q5JVX7 400 aa13.32□□□□□ -0.28
PTPN20-228ENST00000513266 ZNF408Q9H9D4 720 aa13.32□□□□□ -0.28
PTPN20-228ENST00000513266 KIAA0100Q14667 2235 aaKnown RBP13.32□□□□□ -0.28
PTPN20-228ENST00000513266 NPHP1O15259 732 aa13.31□□□□□ -0.28
PTPN20-228ENST00000513266 TBC1D2BQ9UPU7 963 aa13.31□□□□□ -0.28
PTPN20-228ENST00000513266 RBBP6Q7Z6E9 1792 aaKnown RBP13.3□□□□□ -0.28
PTPN20-228ENST00000513266 A0A087WZG4 1122 aa13.3□□□□□ -0.28
PTPN20-228ENST00000513266 HUNKP57058 714 aa13.3□□□□□ -0.28
PTPN20-228ENST00000513266 KIF23Q02241 960 aaPredicted RBP13.3□□□□□ -0.28
PTPN20-228ENST00000513266 SETDB2Q96T68 719 aa13.3□□□□□ -0.28
PTPN20-228ENST00000513266 PSMD1Q99460 953 aa13.3□□□□□ -0.28
PTPN20-228ENST00000513266 CARD14Q9BXL6 1004 aa13.3□□□□□ -0.28
PTPN20-228ENST00000513266 SLC52A2Q9HAB3 445 aa13.3□□□□□ -0.28
PTPN20-228ENST00000513266 PGAP2Q9UHJ9 254 aa13.3□□□□□ -0.28
PTPN20-228ENST00000513266 PAPPA2Q9BXP8 1791 aa13.3□□□□□ -0.28
PTPN20-228ENST00000513266 KLRG2A4D1S0 409 aaPredicted RBP13.29□□□□□ -0.28
PTPN20-228ENST00000513266 ADARB2Q9NS39 739 aaKnown RBP13.29□□□□□ -0.28
PTPN20-228ENST00000513266 GPRC5DQ9NZD1 345 aa13.29□□□□□ -0.28
PTPN20-228ENST00000513266 PKN2Q16513 984 aaKnown RBP13.28□□□□□ -0.28
PTPN20-228ENST00000513266 AEBP1Q8IUX7 1158 aa13.28□□□□□ -0.28
PTPN20-228ENST00000513266 VSIG10Q8N0Z9 540 aa13.28□□□□□ -0.28
PTPN20-228ENST00000513266 CAMTA2O94983 1202 aa13.27□□□□□ -0.29
PTPN20-228ENST00000513266 NEUROD1Q13562 356 aa13.27□□□□□ -0.29
PTPN20-228ENST00000513266 RGMBQ6NW40 437 aa13.27□□□□□ -0.29
PTPN20-228ENST00000513266 DLK2Q6UY11 383 aa13.27□□□□□ -0.29
PTPN20-228ENST00000513266 SLC17A8Q8NDX2 589 aa13.27□□□□□ -0.29
PTPN20-228ENST00000513266 LGR6Q9HBX8 967 aa13.27□□□□□ -0.29
PTPN20-228ENST00000513266 COL6A3P12111 3177 aa13.27□□□□□ -0.29
PTPN20-228ENST00000513266 HIRAP54198 1017 aaPredicted RBP13.26□□□□□ -0.29
PTPN20-228ENST00000513266 CSRNP1Q96S65 589 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms