RNA–Protein interactions for RNA: ENST00000513153.5

LINC01088-210, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 695 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-210ENST00000513153 PRM3Q9NNZ6 103 aa8.86□□□□□ -0.99
LINC01088-210ENST00000513153 PRDM6Q9NQX0 595 aa8.86□□□□□ -0.99
LINC01088-210ENST00000513153 CABP1Q9NZU7 370 aa8.86□□□□□ -0.99
LINC01088-210ENST00000513153 ALBP02768 609 aa8.85□□□□□ -0.99
LINC01088-210ENST00000513153 MICALL1Q8N3F8 863 aa8.85□□□□□ -0.99
LINC01088-210ENST00000513153 STARD13Q9Y3M8 1113 aa8.85□□□□□ -0.99
LINC01088-210ENST00000513153 C9orf172C9J069 976 aa8.84□□□□□ -0.99
LINC01088-210ENST00000513153 CDK2AP1O14519 115 aa8.84□□□□□ -0.99
LINC01088-210ENST00000513153 USP3Q9Y6I4 520 aa8.84□□□□□ -0.99
LINC01088-210ENST00000513153 KRTAP4-8A0A0G2JLE6 195 aa8.83□□□□□ -1
LINC01088-210ENST00000513153 NID1P14543 1247 aa8.83□□□□□ -1
LINC01088-210ENST00000513153 ABL2P42684 1182 aa8.83□□□□□ -1
LINC01088-210ENST00000513153 ADGRE1Q14246 886 aa8.83□□□□□ -1
LINC01088-210ENST00000513153 MCM6Q14566 821 aa8.83□□□□□ -1
LINC01088-210ENST00000513153 IQSEC3Q9UPP2 1182 aaPredicted RBP8.83□□□□□ -1
LINC01088-210ENST00000513153 PARP3Q9Y6F1 533 aa8.83□□□□□ -1
LINC01088-210ENST00000513153 A6NJY4 79 aa8.82□□□□□ -1
LINC01088-210ENST00000513153 PRKCSHP14314 528 aaPredicted RBP8.82□□□□□ -1
LINC01088-210ENST00000513153 MBTPS1Q14703 1052 aa8.82□□□□□ -1
LINC01088-210ENST00000513153 MTFR1Q15390 333 aa8.82□□□□□ -1
LINC01088-210ENST00000513153 TRAPPC3LQ5T215 181 aa8.82□□□□□ -1
LINC01088-210ENST00000513153 TNFRSF25Q93038 417 aa8.82□□□□□ -1
LINC01088-210ENST00000513153 PLPP7Q8NBV4 271 aa8.81□□□□□ -1
LINC01088-210ENST00000513153 SLC4A9Q96Q91 983 aa8.81□□□□□ -1
LINC01088-210ENST00000513153 SLC30A3Q99726 388 aa8.81□□□□□ -1
LINC01088-210ENST00000513153 TMEM229AB2RXF0 380 aa8.8□□□□□ -1
LINC01088-210ENST00000513153 TXLNAP40222 546 aa8.8□□□□□ -1
LINC01088-210ENST00000513153 ADH7P40394 386 aa8.8□□□□□ -1
LINC01088-210ENST00000513153 WASHC4Q2M389 1173 aa8.8□□□□□ -1
LINC01088-210ENST00000513153 MAP7D1Q3KQU3 841 aa8.8□□□□□ -1
LINC01088-210ENST00000513153 LRRC69Q6ZNQ3 347 aa8.8□□□□□ -1
LINC01088-210ENST00000513153 TXNRD3Q86VQ6 643 aa8.8□□□□□ -1
LINC01088-210ENST00000513153 SELPP16109 830 aa8.79□□□□□ -1
LINC01088-210ENST00000513153 SFSWAPQ12872 951 aaKnown RBP8.79□□□□□ -1
LINC01088-210ENST00000513153 PIK3CDO00329 1044 aa8.78□□□□□ -1
LINC01088-210ENST00000513153 TP53INP1Q96A56 240 aa8.78□□□□□ -1
LINC01088-210ENST00000513153 NEUROD4Q9HD90 331 aa8.78□□□□□ -1
LINC01088-210ENST00000513153 NEUROD1Q13562 356 aa8.77□□□□□ -1.01
LINC01088-210ENST00000513153 C20orf204Q6ZNR8 217 aa8.77□□□□□ -1.01
LINC01088-210ENST00000513153 COG6Q9Y2V7 657 aa8.77□□□□□ -1.01
LINC01088-210ENST00000513153 LILRB5O75023 590 aa8.76□□□□□ -1.01
LINC01088-210ENST00000513153 ELNP15502 786 aa8.76□□□□□ -1.01
LINC01088-210ENST00000513153 SOX11P35716 441 aa8.76□□□□□ -1.01
LINC01088-210ENST00000513153 NRG1Q02297 640 aaPredicted RBP8.76□□□□□ -1.01
LINC01088-210ENST00000513153 SPEM2Q0P670 501 aa8.76□□□□□ -1.01
LINC01088-210ENST00000513153 SEMA3FQ13275 785 aa8.76□□□□□ -1.01
LINC01088-210ENST00000513153 RAB44Q7Z6P3 723 aaPredicted RBP8.76□□□□□ -1.01
LINC01088-210ENST00000513153 LENG1Q96BZ8 264 aaPredicted RBP8.76□□□□□ -1.01
LINC01088-210ENST00000513153 A0A0A0MRY4 1105 aa8.75□□□□□ -1.01
LINC01088-210ENST00000513153 SHISA2Q6UWI4 295 aa8.75□□□□□ -1.01
LINC01088-210ENST00000513153 L3MBTL2Q969R5 705 aa8.75□□□□□ -1.01
LINC01088-210ENST00000513153 PCDHGA11Q9Y5H2 935 aa8.75□□□□□ -1.01
LINC01088-210ENST00000513153 RAC1P63000 192 aa8.74□□□□□ -1.01
LINC01088-210ENST00000513153 MCTP1Q6DN14 999 aa8.74□□□□□ -1.01
LINC01088-210ENST00000513153 ZDHHC1Q8WTX9 485 aa8.74□□□□□ -1.01
LINC01088-210ENST00000513153 ALG2Q9H553 416 aa8.73□□□□□ -1.01
LINC01088-210ENST00000513153 USP21Q9UK80 565 aa8.73□□□□□ -1.01
LINC01088-210ENST00000513153 EML1O00423 815 aa8.72□□□□□ -1.01
LINC01088-210ENST00000513153 BACH1O14867 736 aa8.72□□□□□ -1.01
LINC01088-210ENST00000513153 NOS2P35228 1153 aa8.71□□□□□ -1.02
LINC01088-210ENST00000513153 TEAD4Q15561 434 aa8.71□□□□□ -1.02
LINC01088-210ENST00000513153 POM121Q96HA1 1249 aa8.71□□□□□ -1.02
LINC01088-210ENST00000513153 SCHIP1Q9P0W5 487 aaPredicted RBP8.71□□□□□ -1.02
LINC01088-210ENST00000513153 RNF112Q9ULX5 631 aa8.71□□□□□ -1.02
LINC01088-210ENST00000513153 SSBP4Q9BWG4 385 aaPredicted RBP8.7□□□□□ -1.02
LINC01088-210ENST00000513153 ZNF232Q9UNY5 417 aa8.7□□□□□ -1.02
LINC01088-210ENST00000513153 GPC6Q9Y625 555 aaPredicted RBP8.7□□□□□ -1.02
LINC01088-210ENST00000513153 TBC1D8BQ0IIM8 1120 aa8.69□□□□□ -1.02
LINC01088-210ENST00000513153 C7orf43Q8WVR3 580 aa8.69□□□□□ -1.02
LINC01088-210ENST00000513153 JPH1Q9HDC5 661 aaPredicted RBP8.69□□□□□ -1.02
LINC01088-210ENST00000513153 BRD7Q9NPI1 651 aa8.69□□□□□ -1.02
LINC01088-210ENST00000513153 EML3Q32P44 896 aa8.68□□□□□ -1.02
LINC01088-210ENST00000513153 NFATC2IPQ8NCF5 419 aa8.68□□□□□ -1.02
LINC01088-210ENST00000513153 RHPN1Q8TCX5 695 aa8.68□□□□□ -1.02
LINC01088-210ENST00000513153 CEP63Q96MT8 703 aa8.68□□□□□ -1.02
LINC01088-210ENST00000513153 PAX4O43316 350 aa8.67□□□□□ -1.02
LINC01088-210ENST00000513153 SKIP12755 728 aa8.67□□□□□ -1.02
LINC01088-210ENST00000513153 FMR1NBQ8N0W7 255 aaPredicted RBP8.67□□□□□ -1.02
LINC01088-210ENST00000513153 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.67□□□□□ -1.02
LINC01088-210ENST00000513153 NUDT8Q8WV74 236 aa8.67□□□□□ -1.02
LINC01088-210ENST00000513153 BHMTQ93088 406 aa8.67□□□□□ -1.02
LINC01088-210ENST00000513153 UBE2OQ9C0C9 1292 aaKnown RBP8.67□□□□□ -1.02
LINC01088-210ENST00000513153 IGFLR1Q9H665 355 aa8.67□□□□□ -1.02
LINC01088-210ENST00000513153 KCNH4Q9UQ05 1017 aa8.67□□□□□ -1.02
LINC01088-210ENST00000513153 LZTS3O60299 673 aaPredicted RBP8.66□□□□□ -1.02
LINC01088-210ENST00000513153 COBLO75128 1261 aa8.66□□□□□ -1.02
LINC01088-210ENST00000513153 TXKP42681 527 aa8.66□□□□□ -1.02
LINC01088-210ENST00000513153 EPHA4P54764 986 aa8.66□□□□□ -1.02
LINC01088-210ENST00000513153 GTF2IP78347 998 aa8.66□□□□□ -1.02
LINC01088-210ENST00000513153 NCOA4Q13772 614 aa8.66□□□□□ -1.02
LINC01088-210ENST00000513153 TBCELQ5QJ74 424 aa8.66□□□□□ -1.02
LINC01088-210ENST00000513153 ADAMTS19Q8TE59 1207 aa8.66□□□□□ -1.02
LINC01088-210ENST00000513153 ZNF358Q9NW07 568 aa8.66□□□□□ -1.02
LINC01088-210ENST00000513153 NOD1Q9Y239 953 aa8.66□□□□□ -1.02
LINC01088-210ENST00000513153 COL17A1Q9UMD9 1497 aaPredicted RBP8.65□□□□□ -1.02
LINC01088-210ENST00000513153 SH3PXD2AQ5TCZ1 1133 aa8.65□□□□□ -1.02
LINC01088-210ENST00000513153 SLC9A9Q8IVB4 645 aa8.65□□□□□ -1.02
LINC01088-210ENST00000513153 DMRTC2Q8IXT2 367 aaPredicted RBP8.65□□□□□ -1.02
LINC01088-210ENST00000513153 PCMTD2Q9NV79 361 aa8.65□□□□□ -1.02
LINC01088-210ENST00000513153 SLC6A14Q9UN76 642 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms