RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 PRKRIP1Q9H875 184 aaPredicted RBP15.89■□□□□ 0.13
CDK7-208ENST00000512687 PIM2Q9P1W9 311 aa15.89■□□□□ 0.13
CDK7-208ENST00000512687 TMPOP42166 694 aaKnown RBP15.88■□□□□ 0.13
CDK7-208ENST00000512687 EIF4A1P60842 406 aaKnown RBP15.88■□□□□ 0.13
CDK7-208ENST00000512687 RIPK4P57078 832 aa15.87■□□□□ 0.13
CDK7-208ENST00000512687 DALRD3Q5D0E6 543 aaKnown RBP15.87■□□□□ 0.13
CDK7-208ENST00000512687 ARHGAP27Q6ZUM4 889 aa15.87■□□□□ 0.13
CDK7-208ENST00000512687 CCDC24Q8N4L8 307 aa15.87■□□□□ 0.13
CDK7-208ENST00000512687 PNISRQ8TF01 805 aaKnown RBP15.87■□□□□ 0.13
CDK7-208ENST00000512687 RRP7AQ9Y3A4 280 aaKnown RBP15.87■□□□□ 0.13
CDK7-208ENST00000512687 GIGYF1O75420 1035 aaPredicted RBP15.86■□□□□ 0.13
CDK7-208ENST00000512687 PRR5LQ6MZQ0 368 aa15.86■□□□□ 0.13
CDK7-208ENST00000512687 ZNF526Q8TF50 670 aaPredicted RBP15.86■□□□□ 0.13
CDK7-208ENST00000512687 C1QTNF8P60827 252 aa15.84■□□□□ 0.13
CDK7-208ENST00000512687 C2CD5Q86YS7 1000 aa15.84■□□□□ 0.13
CDK7-208ENST00000512687 ADAMTS8Q9UP79 889 aa15.84■□□□□ 0.13
CDK7-208ENST00000512687 LAMB2P55268 1798 aa15.84■□□□□ 0.13
CDK7-208ENST00000512687 WDR43Q15061 677 aaKnown RBP eCLIP15.83■□□□□ 0.12
CDK7-208ENST00000512687 HLFQ16534 295 aa15.83■□□□□ 0.12
CDK7-208ENST00000512687 NPM2Q86SE8 214 aaKnown RBP15.83■□□□□ 0.12
CDK7-208ENST00000512687 SETDB2Q96T68 719 aa15.83■□□□□ 0.12
CDK7-208ENST00000512687 TSPYL4Q9UJ04 414 aa15.83■□□□□ 0.12
CDK7-208ENST00000512687 RASSF7Q02833 373 aa15.82■□□□□ 0.12
CDK7-208ENST00000512687 NEUROD2Q15784 382 aa15.82■□□□□ 0.12
CDK7-208ENST00000512687 CNBD1Q8NA66 436 aa15.82■□□□□ 0.12
CDK7-208ENST00000512687 RUNDC1Q96C34 613 aa15.82■□□□□ 0.12
CDK7-208ENST00000512687 GPBP1L1Q9HC44 474 aaPredicted RBP15.82■□□□□ 0.12
CDK7-208ENST00000512687 TRIM35Q9UPQ4 493 aa15.82■□□□□ 0.12
CDK7-208ENST00000512687 PRELPP51888 382 aa15.81■□□□□ 0.12
CDK7-208ENST00000512687 C9orf131Q5VYM1 1079 aa15.81■□□□□ 0.12
CDK7-208ENST00000512687 CLEC4GQ6UXB4 293 aa15.81■□□□□ 0.12
CDK7-208ENST00000512687 NGEFQ8N5V2 710 aa15.81■□□□□ 0.12
CDK7-208ENST00000512687 BRIP1Q9BX63 1249 aa15.81■□□□□ 0.12
CDK7-208ENST00000512687 H0YIN7 160 aa15.8■□□□□ 0.12
CDK7-208ENST00000512687 MYL6BP14649 208 aa15.8■□□□□ 0.12
CDK7-208ENST00000512687 LMOD3Q0VAK6 560 aa15.8■□□□□ 0.12
CDK7-208ENST00000512687 TTLL7Q6ZT98 887 aa15.8■□□□□ 0.12
CDK7-208ENST00000512687 TTLL6Q8N841 843 aa15.8■□□□□ 0.12
CDK7-208ENST00000512687 ZNF652Q9Y2D9 606 aa15.8■□□□□ 0.12
CDK7-208ENST00000512687 ZEB1P37275 1124 aaPredicted RBP15.79■□□□□ 0.12
CDK7-208ENST00000512687 KRT24Q2M2I5 525 aa15.79■□□□□ 0.12
CDK7-208ENST00000512687 LRP10Q7Z4F1 713 aa15.79■□□□□ 0.12
CDK7-208ENST00000512687 NIP7Q9Y221 180 aaKnown RBP eCLIP15.79■□□□□ 0.12
CDK7-208ENST00000512687 MAP3K15Q6ZN16 1313 aa15.78■□□□□ 0.12
CDK7-208ENST00000512687 KIF3CO14782 793 aa15.78■□□□□ 0.12
CDK7-208ENST00000512687 RGL2O15211 777 aa15.78■□□□□ 0.12
CDK7-208ENST00000512687 PDE6BP35913 854 aa15.78■□□□□ 0.12
CDK7-208ENST00000512687 ST5P78524 1137 aa15.78■□□□□ 0.12
CDK7-208ENST00000512687 PDIA6Q15084 440 aa15.78■□□□□ 0.12
CDK7-208ENST00000512687 CCDC184Q52MB2 194 aa15.78■□□□□ 0.12
CDK7-208ENST00000512687 NBPF5PQ86XG9 351 aaPredicted RBP15.78■□□□□ 0.12
CDK7-208ENST00000512687 ZNF622Q969S3 477 aaKnown RBP eCLIP15.78■□□□□ 0.12
CDK7-208ENST00000512687 BABAM1Q9NWV8 329 aa15.78■□□□□ 0.12
CDK7-208ENST00000512687 RNF181Q9P0P0 153 aa15.78■□□□□ 0.12
CDK7-208ENST00000512687 ABCC12Q96J65 1359 aa15.77■□□□□ 0.12
CDK7-208ENST00000512687 ERBB4Q15303 1308 aa15.77■□□□□ 0.12
CDK7-208ENST00000512687 FAM177BA6PVY3 158 aa15.77■□□□□ 0.12
CDK7-208ENST00000512687 NFKBIEO00221 500 aa15.77■□□□□ 0.12
CDK7-208ENST00000512687 ANXA1P04083 346 aa15.77■□□□□ 0.12
CDK7-208ENST00000512687 POLA2Q14181 598 aa15.77■□□□□ 0.12
CDK7-208ENST00000512687 PROSER3Q2NL68 480 aa15.77■□□□□ 0.12
CDK7-208ENST00000512687 ZBTB3Q9H5J0 574 aa15.77■□□□□ 0.12
CDK7-208ENST00000512687 UBN2Q6ZU65 1347 aa15.76■□□□□ 0.11
CDK7-208ENST00000512687 CHL1O00533 1208 aa15.76■□□□□ 0.11
CDK7-208ENST00000512687 NPHP1O15259 732 aa15.76■□□□□ 0.11
CDK7-208ENST00000512687 SRGNP10124 158 aa15.76■□□□□ 0.11
CDK7-208ENST00000512687 EIF2S2P20042 333 aaKnown RBP15.76■□□□□ 0.11
CDK7-208ENST00000512687 TAF1P21675 1872 aa15.76■□□□□ 0.11
CDK7-208ENST00000512687 DDX60Q8IY21 1712 aaKnown RBP15.75■□□□□ 0.11
CDK7-208ENST00000512687 SENP3-EIF4A1A0A087X0R7 540 aa15.75■□□□□ 0.11
CDK7-208ENST00000512687 ERVV-1B6SEH8 477 aa15.75■□□□□ 0.11
CDK7-208ENST00000512687 NMRK2Q9NPI5 230 aa15.75■□□□□ 0.11
CDK7-208ENST00000512687 PDZRN3Q9UPQ7 1066 aa15.75■□□□□ 0.11
CDK7-208ENST00000512687 LAS1LQ9Y4W2 734 aaKnown RBP15.75■□□□□ 0.11
CDK7-208ENST00000512687 C21orf2O43822 256 aa15.74■□□□□ 0.11
CDK7-208ENST00000512687 STYK1Q6J9G0 422 aa15.74■□□□□ 0.11
CDK7-208ENST00000512687 KIF6Q6ZMV9 814 aa15.74■□□□□ 0.11
CDK7-208ENST00000512687 NECTIN2Q92692 538 aa15.74■□□□□ 0.11
CDK7-208ENST00000512687 APAF1O14727 1248 aa15.73■□□□□ 0.11
CDK7-208ENST00000512687 GPTP24298 496 aa15.73■□□□□ 0.11
CDK7-208ENST00000512687 PRPF40BQ6NWY9 871 aaKnown RBP15.73■□□□□ 0.11
CDK7-208ENST00000512687 TPTE2Q6XPS3 522 aa15.73■□□□□ 0.11
CDK7-208ENST00000512687 NUTM1Q86Y26 1132 aa15.73■□□□□ 0.11
CDK7-208ENST00000512687 MASTLQ96GX5 879 aa15.73■□□□□ 0.11
CDK7-208ENST00000512687 WDR90Q96KV7 1748 aa15.73■□□□□ 0.11
CDK7-208ENST00000512687 IBTKQ9P2D0 1353 aaPredicted RBP15.73■□□□□ 0.11
CDK7-208ENST00000512687 RIC1Q4ADV7 1423 aa15.72■□□□□ 0.11
CDK7-208ENST00000512687 KLRG2A4D1S0 409 aaPredicted RBP15.72■□□□□ 0.11
CDK7-208ENST00000512687 GIGYF2Q6Y7W6 1299 aaKnown RBP15.72■□□□□ 0.11
CDK7-208ENST00000512687 ZBTB12Q9Y330 459 aaPredicted RBP15.72■□□□□ 0.11
CDK7-208ENST00000512687 ZNF316A6NFI3 1004 aaPredicted RBP15.71■□□□□ 0.11
CDK7-208ENST00000512687 LMNB1P20700 586 aa15.71■□□□□ 0.11
CDK7-208ENST00000512687 ERFEQ4G0M1 354 aa15.71■□□□□ 0.11
CDK7-208ENST00000512687 SUSD4Q5VX71 490 aa15.71■□□□□ 0.11
CDK7-208ENST00000512687 ZNF34Q8IZ26 560 aa15.71■□□□□ 0.11
CDK7-208ENST00000512687 CNKSR1Q969H4 720 aa15.71■□□□□ 0.11
CDK7-208ENST00000512687 NTSR2O95665 410 aa15.7■□□□□ 0.1
CDK7-208ENST00000512687 ZNF853P0CG23 659 aa15.7■□□□□ 0.1
CDK7-208ENST00000512687 NPR1P16066 1061 aa15.7■□□□□ 0.1
CDK7-208ENST00000512687 C7orf43Q8WVR3 580 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms