RNA–Protein interactions for RNA: ENST00000512258.1

MSH3-202, Transcript of mutS homolog 3, humanhuman

TSL 3

Gene MSH3, Length 677 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-202ENST00000512258 GTF2E1P29083 439 aaPredicted RBP8.36□□□□□ -1.07
MSH3-202ENST00000512258 PCBP4P57723 403 aaKnown RBP8.36□□□□□ -1.07
MSH3-202ENST00000512258 COL9A3Q14050 684 aaPredicted RBP8.36□□□□□ -1.07
MSH3-202ENST00000512258 TLR1Q15399 786 aa8.36□□□□□ -1.07
MSH3-202ENST00000512258 CHMP7Q8WUX9 453 aaPredicted RBP8.36□□□□□ -1.07
MSH3-202ENST00000512258 GRIN2AQ12879 1464 aa8.36□□□□□ -1.07
MSH3-202ENST00000512258 ZNF468Q5VIY5 522 aaPredicted RBP8.35□□□□□ -1.07
MSH3-202ENST00000512258 ZNF592Q92610 1267 aa8.35□□□□□ -1.07
MSH3-202ENST00000512258 KIF21BO75037 1637 aa8.35□□□□□ -1.07
MSH3-202ENST00000512258 KRTAP4-8A0A0G2JLE6 195 aa8.34□□□□□ -1.07
MSH3-202ENST00000512258 SCNN1DP51172 638 aa8.34□□□□□ -1.07
MSH3-202ENST00000512258 PRSS36Q5K4E3 855 aa8.34□□□□□ -1.07
MSH3-202ENST00000512258 C1orf216Q8TAB5 229 aa8.34□□□□□ -1.07
MSH3-202ENST00000512258 A0A1W2PNR3 127 aa8.33□□□□□ -1.08
MSH3-202ENST00000512258 CEP170Q5SW79 1584 aa8.33□□□□□ -1.08
MSH3-202ENST00000512258 PHTF2Q8N3S3 785 aa8.33□□□□□ -1.08
MSH3-202ENST00000512258 GOPCQ9HD26 462 aa8.33□□□□□ -1.08
MSH3-202ENST00000512258 STRN4Q9NRL3 753 aa8.33□□□□□ -1.08
MSH3-202ENST00000512258 ZNF330Q9Y3S2 320 aaPredicted RBP8.33□□□□□ -1.08
MSH3-202ENST00000512258 KHNYNO15037 678 aaKnown RBP8.31□□□□□ -1.08
MSH3-202ENST00000512258 FAM157BP0CG42 384 aa8.31□□□□□ -1.08
MSH3-202ENST00000512258 GOLGA3Q08378 1498 aa8.31□□□□□ -1.08
MSH3-202ENST00000512258 NUP160Q12769 1436 aa8.3□□□□□ -1.08
MSH3-202ENST00000512258 FAM229AH3BQW9 127 aa8.3□□□□□ -1.08
MSH3-202ENST00000512258 EFSO43281 561 aa8.3□□□□□ -1.08
MSH3-202ENST00000512258 MTMR14Q8NCE2 650 aa8.3□□□□□ -1.08
MSH3-202ENST00000512258 ZIC5Q96T25 663 aa8.3□□□□□ -1.08
MSH3-202ENST00000512258 ELOA3CA0A087WX78 387 aaPredicted RBP8.29□□□□□ -1.08
MSH3-202ENST00000512258 ELOA3DA6NLF2 546 aaPredicted RBP8.29□□□□□ -1.08
MSH3-202ENST00000512258 UBTFP17480 764 aaKnown RBP8.29□□□□□ -1.08
MSH3-202ENST00000512258 ELOA3BQ3SY89 546 aa8.29□□□□□ -1.08
MSH3-202ENST00000512258 ELOA3Q8NG57 546 aa8.29□□□□□ -1.08
MSH3-202ENST00000512258 CHIC2Q9UKJ5 165 aa8.29□□□□□ -1.08
MSH3-202ENST00000512258 SOCS7O14512 581 aa8.28□□□□□ -1.08
MSH3-202ENST00000512258 INHAP05111 366 aa8.28□□□□□ -1.08
MSH3-202ENST00000512258 RANGAP1P46060 587 aaPredicted RBP8.28□□□□□ -1.08
MSH3-202ENST00000512258 PCMTD1Q96MG8 357 aaPredicted RBP8.28□□□□□ -1.08
MSH3-202ENST00000512258 NIFKQ9BYG3 293 aaKnown RBP8.28□□□□□ -1.08
MSH3-202ENST00000512258 IQSEC3Q9UPP2 1182 aaPredicted RBP8.28□□□□□ -1.08
MSH3-202ENST00000512258 STARD13Q9Y3M8 1113 aa8.28□□□□□ -1.08
MSH3-202ENST00000512258 USP3Q9Y6I4 520 aa8.28□□□□□ -1.08
MSH3-202ENST00000512258 CLASP1Q7Z460 1538 aa8.28□□□□□ -1.08
MSH3-202ENST00000512258 USP4Q13107 963 aa8.27□□□□□ -1.09
MSH3-202ENST00000512258 PRRT3Q5FWE3 981 aa8.27□□□□□ -1.09
MSH3-202ENST00000512258 SAMD5Q5TGI4 173 aa8.27□□□□□ -1.09
MSH3-202ENST00000512258 AIDAQ96BJ3 306 aa8.27□□□□□ -1.09
MSH3-202ENST00000512258 PRDM6Q9NQX0 595 aa8.27□□□□□ -1.09
MSH3-202ENST00000512258 DOLKQ9UPQ8 538 aa8.27□□□□□ -1.09
MSH3-202ENST00000512258 CTTNBP2Q8WZ74 1663 aa8.27□□□□□ -1.09
MSH3-202ENST00000512258 KIAA0586Q9BVV6 1533 aa8.26□□□□□ -1.09
MSH3-202ENST00000512258 BTBD11A6QL63 1104 aa8.26□□□□□ -1.09
MSH3-202ENST00000512258 APBA3O96018 575 aa8.26□□□□□ -1.09
MSH3-202ENST00000512258 GDF10P55107 478 aa8.26□□□□□ -1.09
MSH3-202ENST00000512258 LRP8Q14114 963 aa8.26□□□□□ -1.09
MSH3-202ENST00000512258 ARSJQ5FYB0 599 aaPredicted RBP8.26□□□□□ -1.09
MSH3-202ENST00000512258 MARK1Q9P0L2 795 aa8.26□□□□□ -1.09
MSH3-202ENST00000512258 PRR12Q9ULL5 1215 aa8.26□□□□□ -1.09
MSH3-202ENST00000512258 SPDYE3A6NKU9 549 aa8.25□□□□□ -1.09
MSH3-202ENST00000512258 ADARB2-AS1A8MUL3 147 aa8.25□□□□□ -1.09
MSH3-202ENST00000512258 SMTNP53814 917 aa8.25□□□□□ -1.09
MSH3-202ENST00000512258 C8orf86Q6ZUL3 223 aa8.25□□□□□ -1.09
MSH3-202ENST00000512258 SYT9Q86SS6 491 aa8.25□□□□□ -1.09
MSH3-202ENST00000512258 NBPF11Q86T75 865 aa8.25□□□□□ -1.09
MSH3-202ENST00000512258 ZDHHC3Q9NYG2 299 aa8.25□□□□□ -1.09
MSH3-202ENST00000512258 NDUFB9Q9Y6M9 179 aa8.25□□□□□ -1.09
MSH3-202ENST00000512258 IQGAP2Q13576 1575 aa8.25□□□□□ -1.09
MSH3-202ENST00000512258 TNIKQ9UKE5 1360 aa8.24□□□□□ -1.09
MSH3-202ENST00000512258 ERCC6L2Q5T890 1561 aa8.24□□□□□ -1.09
MSH3-202ENST00000512258 M0R082 166 aa8.24□□□□□ -1.09
MSH3-202ENST00000512258 HYAL3O43820 417 aaPredicted RBP8.24□□□□□ -1.09
MSH3-202ENST00000512258 NID1P14543 1247 aa8.24□□□□□ -1.09
MSH3-202ENST00000512258 LAMC2Q13753 1193 aa8.24□□□□□ -1.09
MSH3-202ENST00000512258 GRIK4Q16099 956 aa8.24□□□□□ -1.09
MSH3-202ENST00000512258 ZNF417Q8TAU3 575 aa8.24□□□□□ -1.09
MSH3-202ENST00000512258 ZNF587Q96SQ5 575 aaPredicted RBP8.24□□□□□ -1.09
MSH3-202ENST00000512258 SIN3BO75182 1162 aa8.23□□□□□ -1.09
MSH3-202ENST00000512258 ALBP02768 609 aa8.23□□□□□ -1.09
MSH3-202ENST00000512258 H2AFB1P0C5Y9 115 aa8.23□□□□□ -1.09
MSH3-202ENST00000512258 H2AFB2P0C5Z0 115 aa8.23□□□□□ -1.09
MSH3-202ENST00000512258 MTFR1Q15390 333 aa8.23□□□□□ -1.09
MSH3-202ENST00000512258 GOLGA2P5Q9HBQ8 144 aa8.23□□□□□ -1.09
MSH3-202ENST00000512258 SHROOM2Q13796 1616 aa8.22□□□□□ -1.09
MSH3-202ENST00000512258 NBPF1Q3BBV0 1214 aa8.22□□□□□ -1.09
MSH3-202ENST00000512258 OXLD1Q5BKU9 147 aa8.22□□□□□ -1.09
MSH3-202ENST00000512258 MICALL1Q8N3F8 863 aa8.22□□□□□ -1.09
MSH3-202ENST00000512258 BANK1Q8NDB2 785 aa8.22□□□□□ -1.09
MSH3-202ENST00000512258 SLC4A9Q96Q91 983 aa8.22□□□□□ -1.09
MSH3-202ENST00000512258 UGGT2Q9NYU1 1516 aa8.21□□□□□ -1.1
MSH3-202ENST00000512258 TMEM229AB2RXF0 380 aa8.21□□□□□ -1.1
MSH3-202ENST00000512258 ALAS2P22557 587 aa8.21□□□□□ -1.1
MSH3-202ENST00000512258 ADGRE1Q14246 886 aa8.21□□□□□ -1.1
MSH3-202ENST00000512258 SNRKQ9NRH2 765 aa8.21□□□□□ -1.1
MSH3-202ENST00000512258 PRG4Q92954 1404 aaPredicted RBP8.2□□□□□ -1.1
MSH3-202ENST00000512258 DISP1Q96F81 1524 aa8.2□□□□□ -1.1
MSH3-202ENST00000512258 CDK2AP1O14519 115 aa8.2□□□□□ -1.1
MSH3-202ENST00000512258 SELPP16109 830 aa8.2□□□□□ -1.1
MSH3-202ENST00000512258 TATP17735 454 aaPredicted RBP8.2□□□□□ -1.1
MSH3-202ENST00000512258 C20orf204Q6ZNR8 217 aa8.2□□□□□ -1.1
MSH3-202ENST00000512258 TNFRSF25Q93038 417 aa8.2□□□□□ -1.1
MSH3-202ENST00000512258 NACC1Q96RE7 527 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms