RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 SCN11AQ9UI33 1791 aa10.28□□□□□ -0.76
HTT-209ENST00000512068 PLCH1Q4KWH8 1693 aa10.28□□□□□ -0.76
HTT-209ENST00000512068 CEMIPQ8WUJ3 1361 aa10.27□□□□□ -0.76
HTT-209ENST00000512068 CACNA1FO60840 1977 aa10.27□□□□□ -0.77
HTT-209ENST00000512068 ZMYND10O75800 440 aa10.27□□□□□ -0.77
HTT-209ENST00000512068 ADAMTS2O95450 1211 aa10.27□□□□□ -0.77
HTT-209ENST00000512068 TYW1BQ6NUM6 668 aa10.27□□□□□ -0.77
HTT-209ENST00000512068 LARP1Q6PKG0 1096 aaKnown RBP10.27□□□□□ -0.77
HTT-209ENST00000512068 ATF7IPQ6VMQ6 1270 aa10.27□□□□□ -0.77
HTT-209ENST00000512068 TSPYL6Q8N831 410 aa10.27□□□□□ -0.77
HTT-209ENST00000512068 C8orf58Q8NAV2 365 aa10.27□□□□□ -0.77
HTT-209ENST00000512068 FBXW7Q969H0 707 aa10.27□□□□□ -0.77
HTT-209ENST00000512068 CLUAP1Q96AJ1 413 aa10.27□□□□□ -0.77
HTT-209ENST00000512068 API5Q9BZZ5 524 aaKnown RBP10.27□□□□□ -0.77
HTT-209ENST00000512068 MIS18AQ9NYP9 233 aa10.27□□□□□ -0.77
HTT-209ENST00000512068 NOB1Q9ULX3 412 aaKnown RBP10.27□□□□□ -0.77
HTT-209ENST00000512068 JCADQ9P266 1359 aa10.26□□□□□ -0.77
HTT-209ENST00000512068 KDM3BQ7LBC6 1761 aa10.26□□□□□ -0.77
HTT-209ENST00000512068 PHKG2P15735 406 aa10.26□□□□□ -0.77
HTT-209ENST00000512068 BRPF1P55201 1214 aaPredicted RBP10.26□□□□□ -0.77
HTT-209ENST00000512068 EN1Q05925 392 aaPredicted RBP10.26□□□□□ -0.77
HTT-209ENST00000512068 CCDC30Q5VVM6 783 aa10.26□□□□□ -0.77
HTT-209ENST00000512068 ZCRB1Q8TBF4 217 aaKnown RBP10.26□□□□□ -0.77
HTT-209ENST00000512068 PANK1Q8TE04 598 aa10.26□□□□□ -0.77
HTT-209ENST00000512068 DCAF5Q96JK2 942 aa10.26□□□□□ -0.77
HTT-209ENST00000512068 LGR6Q9HBX8 967 aa10.26□□□□□ -0.77
HTT-209ENST00000512068 USP35Q9P2H5 1018 aa10.26□□□□□ -0.77
HTT-209ENST00000512068 COG6Q9Y2V7 657 aa10.26□□□□□ -0.77
HTT-209ENST00000512068 NWD2Q9ULI1 1742 aa10.25□□□□□ -0.77
HTT-209ENST00000512068 GPR37O15354 613 aa10.25□□□□□ -0.77
HTT-209ENST00000512068 ITPRIPQ8IWB1 547 aa10.25□□□□□ -0.77
HTT-209ENST00000512068 TTC5Q8N0Z6 440 aa10.25□□□□□ -0.77
HTT-209ENST00000512068 MRPL50Q8N5N7 158 aaKnown RBP10.25□□□□□ -0.77
HTT-209ENST00000512068 ARHGAP45Q92619 1136 aa10.25□□□□□ -0.77
HTT-209ENST00000512068 DDX19BQ9UMR2 479 aa10.25□□□□□ -0.77
HTT-209ENST00000512068 TCERG1O14776 1098 aaKnown RBP10.24□□□□□ -0.77
HTT-209ENST00000512068 TRIM27P14373 513 aa10.24□□□□□ -0.77
HTT-209ENST00000512068 CABP4P57796 275 aa10.24□□□□□ -0.77
HTT-209ENST00000512068 MVPQ14764 893 aaKnown RBP10.24□□□□□ -0.77
HTT-209ENST00000512068 LHX6Q9UPM6 363 aa10.24□□□□□ -0.77
HTT-209ENST00000512068 CCDC9Q9Y3X0 531 aaKnown RBP10.24□□□□□ -0.77
HTT-209ENST00000512068 PTPRCP08575 1304 aa10.24□□□□□ -0.77
HTT-209ENST00000512068 SIPA1L3O60292 1781 aaPredicted RBP10.24□□□□□ -0.77
HTT-209ENST00000512068 ADAMTS7Q9UKP4 1686 aa10.23□□□□□ -0.77
HTT-209ENST00000512068 PSDA5PKW4 1024 aaPredicted RBP10.23□□□□□ -0.77
HTT-209ENST00000512068 HOXB7P09629 217 aa10.23□□□□□ -0.77
HTT-209ENST00000512068 KRT24Q2M2I5 525 aa10.23□□□□□ -0.77
HTT-209ENST00000512068 HDGFL1Q5TGJ6 251 aa10.23□□□□□ -0.77
HTT-209ENST00000512068 MEX3CQ5U5Q3 659 aaKnown RBP10.23□□□□□ -0.77
HTT-209ENST00000512068 BARGINQ6ZT62 677 aa10.23□□□□□ -0.77
HTT-209ENST00000512068 ZNF454Q8N9F8 522 aa10.23□□□□□ -0.77
HTT-209ENST00000512068 DDX54Q8TDD1 881 aaKnown RBP10.23□□□□□ -0.77
HTT-209ENST00000512068 CDCA7Q9BWT1 371 aaPredicted RBP10.23□□□□□ -0.77
HTT-209ENST00000512068 SLC52A2Q9HAB3 445 aa10.23□□□□□ -0.77
HTT-209ENST00000512068 WNK3Q9BYP7 1800 aa10.23□□□□□ -0.77
HTT-209ENST00000512068 ZDHHC16Q969W1 377 aa10.22□□□□□ -0.77
HTT-209ENST00000512068 THRAP3Q9Y2W1 955 aaKnown RBP10.22□□□□□ -0.77
HTT-209ENST00000512068 SPATA31A6Q5VVP1 1343 aa10.22□□□□□ -0.77
HTT-209ENST00000512068 NRAPQ86VF7 1730 aa10.21□□□□□ -0.77
HTT-209ENST00000512068 KAT6BQ8WYB5 2073 aa10.21□□□□□ -0.77
HTT-209ENST00000512068 CYP27B1O15528 508 aa10.21□□□□□ -0.77
HTT-209ENST00000512068 MAP3K7O43318 606 aa10.21□□□□□ -0.77
HTT-209ENST00000512068 EIF2S2P20042 333 aaKnown RBP10.21□□□□□ -0.77
HTT-209ENST00000512068 EIF4A1P60842 406 aaKnown RBP10.21□□□□□ -0.77
HTT-209ENST00000512068 CENPQQ7L2Z9 268 aaPredicted RBP10.21□□□□□ -0.77
HTT-209ENST00000512068 TMEM57Q8N5G2 664 aa10.21□□□□□ -0.77
HTT-209ENST00000512068 KDM6AO15550 1401 aaPredicted RBP10.21□□□□□ -0.78
HTT-209ENST00000512068 MRC1P22897 1456 aa10.21□□□□□ -0.78
HTT-209ENST00000512068 ERVV-2B6SEH9 535 aa10.2□□□□□ -0.78
HTT-209ENST00000512068 EXOC5O00471 708 aa10.2□□□□□ -0.78
HTT-209ENST00000512068 RLBP1P12271 317 aa10.2□□□□□ -0.78
HTT-209ENST00000512068 NFATC2IPQ8NCF5 419 aa10.2□□□□□ -0.78
HTT-209ENST00000512068 NECTIN2Q92692 538 aa10.2□□□□□ -0.78
HTT-209ENST00000512068 NGLY1Q96IV0 654 aa10.2□□□□□ -0.78
HTT-209ENST00000512068 C8orf37Q96NL8 207 aa10.2□□□□□ -0.78
HTT-209ENST00000512068 SHANK3Q9BYB0 1731 aa10.19□□□□□ -0.78
HTT-209ENST00000512068 ABCC4O15439 1325 aa10.19□□□□□ -0.78
HTT-209ENST00000512068 ST18O60284 1047 aa10.19□□□□□ -0.78
HTT-209ENST00000512068 PTGDRQ13258 359 aa10.19□□□□□ -0.78
HTT-209ENST00000512068 FKBP5Q13451 457 aaPredicted RBP10.19□□□□□ -0.78
HTT-209ENST00000512068 PPP4R3BQ5MIZ7 849 aa10.19□□□□□ -0.78
HTT-209ENST00000512068 ZNF790Q6PG37 636 aa10.19□□□□□ -0.78
HTT-209ENST00000512068 FMNL2Q96PY5 1086 aa10.19□□□□□ -0.78
HTT-209ENST00000512068 RWDD1Q9H446 243 aaPredicted RBP10.19□□□□□ -0.78
HTT-209ENST00000512068 TNNQ9UQP3 1299 aa10.19□□□□□ -0.78
HTT-209ENST00000512068 SPATA31A1Q5TZJ5 1347 aa10.18□□□□□ -0.78
HTT-209ENST00000512068 FLIIQ13045 1269 aa10.18□□□□□ -0.78
HTT-209ENST00000512068 HIC1Q14526 733 aa10.18□□□□□ -0.78
HTT-209ENST00000512068 UNC5CLQ8IV45 518 aa10.18□□□□□ -0.78
HTT-209ENST00000512068 NPDC1Q9NQX5 325 aaPredicted RBP10.18□□□□□ -0.78
HTT-209ENST00000512068 TMOD3Q9NYL9 352 aa10.18□□□□□ -0.78
HTT-209ENST00000512068 TNS2Q63HR2 1409 aa10.17□□□□□ -0.78
HTT-209ENST00000512068 A0A0G2JS52 829 aa10.17□□□□□ -0.78
HTT-209ENST00000512068 KCNQ3O43525 872 aa10.17□□□□□ -0.78
HTT-209ENST00000512068 CCT4P50991 539 aaKnown RBP10.17□□□□□ -0.78
HTT-209ENST00000512068 MYT1Q01538 1121 aa10.17□□□□□ -0.78
HTT-209ENST00000512068 SLC39A6Q13433 755 aa10.17□□□□□ -0.78
HTT-209ENST00000512068 DDB1Q16531 1140 aa10.17□□□□□ -0.78
HTT-209ENST00000512068 TSR1Q2NL82 804 aaKnown RBP10.17□□□□□ -0.78
HTT-209ENST00000512068 C6orf132Q5T0Z8 1188 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms