RNA–Protein interactions for RNA: ENST00000511988.5

SUB1-210, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-210ENST00000511988 ARFGEF2Q9Y6D5 1785 aa12.97□□□□□ -0.33
SUB1-210ENST00000511988 TCERG1O14776 1098 aaKnown RBP12.96□□□□□ -0.33
SUB1-210ENST00000511988 CYP19A1P11511 503 aaPredicted RBP12.96□□□□□ -0.33
SUB1-210ENST00000511988 POLD1P28340 1107 aa12.96□□□□□ -0.33
SUB1-210ENST00000511988 FLIIQ13045 1269 aa12.96□□□□□ -0.33
SUB1-210ENST00000511988 PDE3AQ14432 1141 aa12.96□□□□□ -0.33
SUB1-210ENST00000511988 SLC27A3Q5K4L6 730 aa12.96□□□□□ -0.33
SUB1-210ENST00000511988 CCNL1Q9UK58 526 aaPredicted RBP12.96□□□□□ -0.33
SUB1-210ENST00000511988 NOB1Q9ULX3 412 aaKnown RBP12.96□□□□□ -0.33
SUB1-210ENST00000511988 CNTNAP4Q9C0A0 1308 aa12.95□□□□□ -0.34
SUB1-210ENST00000511988 MYH14Q7Z406 1995 aaKnown RBP12.95□□□□□ -0.34
SUB1-210ENST00000511988 TRIM27P14373 513 aa12.95□□□□□ -0.34
SUB1-210ENST00000511988 PDIA6Q15084 440 aa12.95□□□□□ -0.34
SUB1-210ENST00000511988 FTSJ3Q8IY81 847 aaKnown RBP12.95□□□□□ -0.34
SUB1-210ENST00000511988 ABCC4O15439 1325 aa12.94□□□□□ -0.34
SUB1-210ENST00000511988 SCN7AQ01118 1682 aa12.94□□□□□ -0.34
SUB1-210ENST00000511988 PLIN1O60240 522 aa12.94□□□□□ -0.34
SUB1-210ENST00000511988 DDX58O95786 925 aaKnown RBP12.94□□□□□ -0.34
SUB1-210ENST00000511988 ITPK1Q13572 414 aa12.94□□□□□ -0.34
SUB1-210ENST00000511988 PROSER3Q2NL68 480 aa12.94□□□□□ -0.34
SUB1-210ENST00000511988 CCDC87Q9NVE4 849 aa12.94□□□□□ -0.34
SUB1-210ENST00000511988 BCORQ6W2J9 1755 aa12.94□□□□□ -0.34
SUB1-210ENST00000511988 CRKLP46109 303 aaKnown RBP12.93□□□□□ -0.34
SUB1-210ENST00000511988 FKBP5Q13451 457 aaPredicted RBP12.93□□□□□ -0.34
SUB1-210ENST00000511988 LRP10Q7Z4F1 713 aa12.93□□□□□ -0.34
SUB1-210ENST00000511988 DZIP1LQ8IYY4 767 aaKnown RBP12.93□□□□□ -0.34
SUB1-210ENST00000511988 ANKRD36CQ5JPF3 1778 aa12.93□□□□□ -0.34
SUB1-210ENST00000511988 NBPF26B4DH59 902 aa12.92□□□□□ -0.34
SUB1-210ENST00000511988 ANXA1P04083 346 aa12.92□□□□□ -0.34
SUB1-210ENST00000511988 A1BGP04217 495 aa12.92□□□□□ -0.34
SUB1-210ENST00000511988 MYL6BP14649 208 aa12.92□□□□□ -0.34
SUB1-210ENST00000511988 IL6STP40189 918 aaPredicted RBP12.92□□□□□ -0.34
SUB1-210ENST00000511988 RC3H1Q5TC82 1133 aaKnown RBP12.92□□□□□ -0.34
SUB1-210ENST00000511988 NBPF10Q6P3W6 841 aaKnown RBP12.92□□□□□ -0.34
SUB1-210ENST00000511988 UBR3Q6ZT12 1888 aa12.92□□□□□ -0.34
SUB1-210ENST00000511988 G2E3Q7L622 706 aa12.92□□□□□ -0.34
SUB1-210ENST00000511988 NBPF15Q8N660 670 aa12.92□□□□□ -0.34
SUB1-210ENST00000511988 LINC00116Q8NCU8 138 aa12.92□□□□□ -0.34
SUB1-210ENST00000511988 PHAXQ9H814 394 aaKnown RBP12.92□□□□□ -0.34
SUB1-210ENST00000511988 ZBTB1Q9Y2K1 713 aa12.92□□□□□ -0.34
SUB1-210ENST00000511988 C4AP0C0L4 1744 aa12.91□□□□□ -0.34
SUB1-210ENST00000511988 ZNF827Q17R98 1081 aa12.91□□□□□ -0.34
SUB1-210ENST00000511988 XAGE3Q8WTP9 111 aa12.91□□□□□ -0.34
SUB1-210ENST00000511988 AFDNP55196 1824 aaKnown RBP12.9□□□□□ -0.34
SUB1-210ENST00000511988 TOMM70O94826 608 aa12.9□□□□□ -0.34
SUB1-210ENST00000511988 ERICH6BQ5W0A0 696 aa12.9□□□□□ -0.34
SUB1-210ENST00000511988 INTS5Q6P9B9 1019 aaKnown RBP12.9□□□□□ -0.34
SUB1-210ENST00000511988 NPM2Q86SE8 214 aaKnown RBP12.9□□□□□ -0.34
SUB1-210ENST00000511988 COL15A1P39059 1388 aa12.9□□□□□ -0.34
SUB1-210ENST00000511988 IBTKQ9P2D0 1353 aaPredicted RBP12.9□□□□□ -0.34
SUB1-210ENST00000511988 QSER1Q2KHR3 1735 aa12.9□□□□□ -0.34
SUB1-210ENST00000511988 WDR90Q96KV7 1748 aa12.9□□□□□ -0.34
SUB1-210ENST00000511988 RLBP1P12271 317 aa12.89□□□□□ -0.35
SUB1-210ENST00000511988 PIP4K2AP48426 406 aaPredicted RBP12.89□□□□□ -0.35
SUB1-210ENST00000511988 CCT4P50991 539 aaKnown RBP12.89□□□□□ -0.35
SUB1-210ENST00000511988 MVPQ14764 893 aaKnown RBP12.89□□□□□ -0.35
SUB1-210ENST00000511988 C20orf194Q5TEA3 1177 aa12.89□□□□□ -0.35
SUB1-210ENST00000511988 KSR2Q6VAB6 950 aa12.89□□□□□ -0.35
SUB1-210ENST00000511988 KIF6Q6ZMV9 814 aa12.89□□□□□ -0.35
SUB1-210ENST00000511988 COPS6Q7L5N1 327 aa12.89□□□□□ -0.35
SUB1-210ENST00000511988 PANK1Q8TE04 598 aa12.89□□□□□ -0.35
SUB1-210ENST00000511988 DNAAF4Q8WXU2 420 aa12.89□□□□□ -0.35
SUB1-210ENST00000511988 CLUAP1Q96AJ1 413 aa12.89□□□□□ -0.35
SUB1-210ENST00000511988 TUBGCP6Q96RT7 1819 aa12.88□□□□□ -0.35
SUB1-210ENST00000511988 A0A087WZG4 1122 aa12.88□□□□□ -0.35
SUB1-210ENST00000511988 PI4KAP2A4QPH2 592 aa12.88□□□□□ -0.35
SUB1-210ENST00000511988 EIF5P55010 431 aaKnown RBP12.88□□□□□ -0.35
SUB1-210ENST00000511988 INTS3Q68E01 1043 aaKnown RBP12.88□□□□□ -0.35
SUB1-210ENST00000511988 PI4KAP1Q8N8J0 262 aa12.88□□□□□ -0.35
SUB1-210ENST00000511988 PLBD2Q8NHP8 589 aa12.88□□□□□ -0.35
SUB1-210ENST00000511988 AK7Q96M32 723 aa12.88□□□□□ -0.35
SUB1-210ENST00000511988 CHMP4BQ9H444 224 aaKnown RBP12.88□□□□□ -0.35
SUB1-210ENST00000511988 LRRC4BQ9NT99 713 aa12.88□□□□□ -0.35
SUB1-210ENST00000511988 DDX19BQ9UMR2 479 aa12.88□□□□□ -0.35
SUB1-210ENST00000511988 TNNQ9UQP3 1299 aa12.88□□□□□ -0.35
SUB1-210ENST00000511988 NUP98P52948 1817 aa12.88□□□□□ -0.35
SUB1-210ENST00000511988 RGL2O15211 777 aa12.87□□□□□ -0.35
SUB1-210ENST00000511988 RPS6KA4O75676 772 aa12.87□□□□□ -0.35
SUB1-210ENST00000511988 HSPA1AP0DMV8 641 aaKnown RBP12.87□□□□□ -0.35
SUB1-210ENST00000511988 HSPA1BP0DMV9 641 aaKnown RBP12.87□□□□□ -0.35
SUB1-210ENST00000511988 IRX6P78412 446 aaPredicted RBP12.87□□□□□ -0.35
SUB1-210ENST00000511988 AIMP1Q12904 312 aaKnown RBP12.87□□□□□ -0.35
SUB1-210ENST00000511988 AAMPQ13685 434 aa12.87□□□□□ -0.35
SUB1-210ENST00000511988 FKBP8Q14318 412 aa12.87□□□□□ -0.35
SUB1-210ENST00000511988 ANKRD13DQ6ZTN6 518 aa12.87□□□□□ -0.35
SUB1-210ENST00000511988 RIC3Q7Z5B4 369 aa12.87□□□□□ -0.35
SUB1-210ENST00000511988 ITPRIPQ8IWB1 547 aa12.87□□□□□ -0.35
SUB1-210ENST00000511988 TMEM57Q8N5G2 664 aa12.87□□□□□ -0.35
SUB1-210ENST00000511988 CRBNQ96SW2 442 aa12.87□□□□□ -0.35
SUB1-210ENST00000511988 MAP3K2Q9Y2U5 619 aa12.87□□□□□ -0.35
SUB1-210ENST00000511988 ZNF330Q9Y3S2 320 aaPredicted RBP12.87□□□□□ -0.35
SUB1-210ENST00000511988 MAP3K15Q6ZN16 1313 aa12.87□□□□□ -0.35
SUB1-210ENST00000511988 F6X3S4 739 aa12.86□□□□□ -0.35
SUB1-210ENST00000511988 GNPATO15228 680 aa12.86□□□□□ -0.35
SUB1-210ENST00000511988 KCNQ4P56696 695 aa12.86□□□□□ -0.35
SUB1-210ENST00000511988 NEXNQ0ZGT2 675 aa12.86□□□□□ -0.35
SUB1-210ENST00000511988 FAM161AQ3B820 660 aa12.86□□□□□ -0.35
SUB1-210ENST00000511988 SLC4A10Q6U841 1118 aa12.86□□□□□ -0.35
SUB1-210ENST00000511988 DZIP3Q86Y13 1208 aaKnown RBP12.86□□□□□ -0.35
SUB1-210ENST00000511988 SLC16A10Q8TF71 515 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms