RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 USP42Q9H9J4 1324 aaKnown RBP7.78□□□□□ -1.16
RNF4-217ENST00000511892 C10orf71Q711Q0 1435 aa7.78□□□□□ -1.16
RNF4-217ENST00000511892 KCNQ3O43525 872 aa7.78□□□□□ -1.16
RNF4-217ENST00000511892 ZNF790Q6PG37 636 aa7.78□□□□□ -1.16
RNF4-217ENST00000511892 ZNF496Q96IT1 587 aaPredicted RBP7.78□□□□□ -1.16
RNF4-217ENST00000511892 ZBTB1Q9Y2K1 713 aa7.78□□□□□ -1.16
RNF4-217ENST00000511892 PXDNLA1KZ92 1463 aa7.78□□□□□ -1.16
RNF4-217ENST00000511892 SCN7AQ01118 1682 aa7.78□□□□□ -1.16
RNF4-217ENST00000511892 BCORQ6W2J9 1755 aa7.78□□□□□ -1.16
RNF4-217ENST00000511892 SBF1O95248 1867 aa7.78□□□□□ -1.16
RNF4-217ENST00000511892 CCDC88AQ3V6T2 1871 aa7.78□□□□□ -1.16
RNF4-217ENST00000511892 ANKRD31Q8N7Z5 1873 aa7.78□□□□□ -1.16
RNF4-217ENST00000511892 LAMB4A4D0S4 1761 aa7.77□□□□□ -1.17
RNF4-217ENST00000511892 COL15A1P39059 1388 aa7.77□□□□□ -1.17
RNF4-217ENST00000511892 HEG1Q9ULI3 1381 aa7.77□□□□□ -1.17
RNF4-217ENST00000511892 GRIN3BO60391 1043 aa7.77□□□□□ -1.17
RNF4-217ENST00000511892 TM4SF1P30408 202 aa7.77□□□□□ -1.17
RNF4-217ENST00000511892 DDR1Q08345 913 aa7.77□□□□□ -1.17
RNF4-217ENST00000511892 TEFQ10587 303 aa7.77□□□□□ -1.17
RNF4-217ENST00000511892 MCM10Q7L590 875 aa7.77□□□□□ -1.17
RNF4-217ENST00000511892 TTC5Q8N0Z6 440 aa7.77□□□□□ -1.17
RNF4-217ENST00000511892 PLEKHF1Q96S99 279 aa7.77□□□□□ -1.17
RNF4-217ENST00000511892 BCL2L12Q9HB09 334 aa7.77□□□□□ -1.17
RNF4-217ENST00000511892 WWC3Q9ULE0 1092 aa7.77□□□□□ -1.17
RNF4-217ENST00000511892 PARP3Q9Y6F1 533 aa7.77□□□□□ -1.17
RNF4-217ENST00000511892 CACNA1SQ13698 1873 aa7.77□□□□□ -1.17
RNF4-217ENST00000511892 A0A0G2JLW4 131 aa7.76□□□□□ -1.17
RNF4-217ENST00000511892 BTBD11A6QL63 1104 aa7.76□□□□□ -1.17
RNF4-217ENST00000511892 CANXP27824 592 aaKnown RBP7.76□□□□□ -1.17
RNF4-217ENST00000511892 EIF5P55010 431 aaKnown RBP7.76□□□□□ -1.17
RNF4-217ENST00000511892 IRX5P78411 483 aaPredicted RBP7.76□□□□□ -1.17
RNF4-217ENST00000511892 DDX10Q13206 875 aaKnown RBP7.76□□□□□ -1.17
RNF4-217ENST00000511892 DCTN1Q14203 1278 aa7.76□□□□□ -1.17
RNF4-217ENST00000511892 USPL1Q5W0Q7 1092 aa7.76□□□□□ -1.17
RNF4-217ENST00000511892 NARFQ9UHQ1 456 aa7.76□□□□□ -1.17
RNF4-217ENST00000511892 CEP350Q5VT06 3117 aa7.76□□□□□ -1.17
RNF4-217ENST00000511892 NUP98P52948 1817 aa7.75□□□□□ -1.17
RNF4-217ENST00000511892 PRAMEF22A3QJZ6 481 aa7.75□□□□□ -1.17
RNF4-217ENST00000511892 POLRMTO00411 1230 aaKnown RBP7.75□□□□□ -1.17
RNF4-217ENST00000511892 HTATSF1O43719 755 aaKnown RBP7.75□□□□□ -1.17
RNF4-217ENST00000511892 ZPR1O75312 459 aa7.75□□□□□ -1.17
RNF4-217ENST00000511892 DPEP1P16444 411 aa7.75□□□□□ -1.17
RNF4-217ENST00000511892 KCNA3P22001 575 aa7.75□□□□□ -1.17
RNF4-217ENST00000511892 TGFB2P61812 414 aa7.75□□□□□ -1.17
RNF4-217ENST00000511892 FMNL2Q96PY5 1086 aa7.75□□□□□ -1.17
RNF4-217ENST00000511892 STARD3NLO95772 234 aa7.74□□□□□ -1.17
RNF4-217ENST00000511892 A1BGP04217 495 aa7.74□□□□□ -1.17
RNF4-217ENST00000511892 NFIXQ14938 502 aa7.74□□□□□ -1.17
RNF4-217ENST00000511892 RALBP1Q15311 655 aa7.74□□□□□ -1.17
RNF4-217ENST00000511892 RTF1Q92541 710 aaKnown RBP7.74□□□□□ -1.17
RNF4-217ENST00000511892 TEX13AQ9BXU3 409 aaPredicted RBP7.74□□□□□ -1.17
RNF4-217ENST00000511892 OCEL1Q9H607 264 aa7.74□□□□□ -1.17
RNF4-217ENST00000511892 MIS18AQ9NYP9 233 aa7.74□□□□□ -1.17
RNF4-217ENST00000511892 USP16Q9Y5T5 823 aa7.74□□□□□ -1.17
RNF4-217ENST00000511892 COL11A2P13942 1736 aaPredicted RBP7.74□□□□□ -1.17
RNF4-217ENST00000511892 ADCY9O60503 1353 aa7.73□□□□□ -1.17
RNF4-217ENST00000511892 IL6STP40189 918 aaPredicted RBP7.73□□□□□ -1.17
RNF4-217ENST00000511892 NFE2L2Q16236 605 aa7.73□□□□□ -1.17
RNF4-217ENST00000511892 DIEXFQ68CQ4 756 aaKnown RBP7.73□□□□□ -1.17
RNF4-217ENST00000511892 ARFGEF2Q9Y6D5 1785 aa7.72□□□□□ -1.17
RNF4-217ENST00000511892 ATP10DQ9P241 1426 aa7.72□□□□□ -1.17
RNF4-217ENST00000511892 A0A087WZG4 1122 aa7.72□□□□□ -1.17
RNF4-217ENST00000511892 CHRNA5P30532 468 aa7.72□□□□□ -1.17
RNF4-217ENST00000511892 PIP4K2AP48426 406 aaPredicted RBP7.72□□□□□ -1.17
RNF4-217ENST00000511892 TAF7Q15545 349 aaPredicted RBP7.72□□□□□ -1.17
RNF4-217ENST00000511892 THUMPD2Q9BTF0 503 aaKnown RBP7.72□□□□□ -1.17
RNF4-217ENST00000511892 TBC1D2BQ9UPU7 963 aa7.72□□□□□ -1.17
RNF4-217ENST00000511892 BCS1LQ9Y276 419 aa7.72□□□□□ -1.17
RNF4-217ENST00000511892 FER1L6Q2WGJ9 1857 aa7.72□□□□□ -1.17
RNF4-217ENST00000511892 MYBBP1AQ9BQG0 1328 aaKnown RBP7.72□□□□□ -1.17
RNF4-217ENST00000511892 DICER1Q9UPY3 1922 aaKnown RBP7.72□□□□□ -1.17
RNF4-217ENST00000511892 CARMIL3Q8ND23 1372 aa7.71□□□□□ -1.17
RNF4-217ENST00000511892 SLX4Q8IY92 1834 aa7.71□□□□□ -1.17
RNF4-217ENST00000511892 NBPF26B4DH59 902 aa7.71□□□□□ -1.18
RNF4-217ENST00000511892 CAMTA2O94983 1202 aa7.71□□□□□ -1.18
RNF4-217ENST00000511892 SERPINB2P05120 415 aa7.71□□□□□ -1.18
RNF4-217ENST00000511892 SNRPA1P09661 255 aaKnown RBP7.71□□□□□ -1.18
RNF4-217ENST00000511892 TBC1D9BQ66K14 1250 aa7.71□□□□□ -1.18
RNF4-217ENST00000511892 NBPF10Q6P3W6 841 aaKnown RBP7.71□□□□□ -1.18
RNF4-217ENST00000511892 NBPF15Q8N660 670 aa7.71□□□□□ -1.18
RNF4-217ENST00000511892 MARVELD3Q96A59 401 aa7.71□□□□□ -1.18
RNF4-217ENST00000511892 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.71□□□□□ -1.18
RNF4-217ENST00000511892 PIM2Q9P1W9 311 aa7.71□□□□□ -1.18
RNF4-217ENST00000511892 ZNF330Q9Y3S2 320 aaPredicted RBP7.71□□□□□ -1.18
RNF4-217ENST00000511892 NEFMP07197 916 aa7.7□□□□□ -1.18
RNF4-217ENST00000511892 DALRD3Q5D0E6 543 aaKnown RBP7.7□□□□□ -1.18
RNF4-217ENST00000511892 BICDL1Q6ZP65 573 aa7.7□□□□□ -1.18
RNF4-217ENST00000511892 PNNQ9H307 717 aaKnown RBP7.7□□□□□ -1.18
RNF4-217ENST00000511892 MAPK8IP3Q9UPT6 1336 aa7.7□□□□□ -1.18
RNF4-217ENST00000511892 GIGYF1O75420 1035 aaPredicted RBP7.69□□□□□ -1.18
RNF4-217ENST00000511892 TMPOP42166 694 aaKnown RBP7.69□□□□□ -1.18
RNF4-217ENST00000511892 RIPK4P57078 832 aa7.69□□□□□ -1.18
RNF4-217ENST00000511892 C1QTNF8P60827 252 aa7.69□□□□□ -1.18
RNF4-217ENST00000511892 EIF4A1P60842 406 aaKnown RBP7.69□□□□□ -1.18
RNF4-217ENST00000511892 ARHGAP27Q6ZUM4 889 aa7.69□□□□□ -1.18
RNF4-217ENST00000511892 DZIP3Q86Y13 1208 aaKnown RBP7.69□□□□□ -1.18
RNF4-217ENST00000511892 PRKRIP1Q9H875 184 aaPredicted RBP7.69□□□□□ -1.18
RNF4-217ENST00000511892 FBXO3Q9UK99 471 aa7.69□□□□□ -1.18
RNF4-217ENST00000511892 TIAM2Q8IVF5 1701 aa7.69□□□□□ -1.18
RNF4-217ENST00000511892 ANKRD36CQ5JPF3 1778 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms