RNA–Protein interactions for RNA: ENST00000511891.5

COPS4-211, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-211ENST00000511891 PIM2Q9P1W9 311 aa13.1□□□□□ -0.31
COPS4-211ENST00000511891 AFDNP55196 1824 aaKnown RBP13.1□□□□□ -0.31
COPS4-211ENST00000511891 MYBBP1AQ9BQG0 1328 aaKnown RBP13.1□□□□□ -0.31
COPS4-211ENST00000511891 CARMIL3Q8ND23 1372 aa13.09□□□□□ -0.31
COPS4-211ENST00000511891 CAMTA2O94983 1202 aa13.09□□□□□ -0.31
COPS4-211ENST00000511891 BRCA1P38398 1863 aaKnown RBP13.09□□□□□ -0.31
COPS4-211ENST00000511891 CCDC24Q8N4L8 307 aa13.09□□□□□ -0.31
COPS4-211ENST00000511891 NBPF26B4DH59 902 aa13.08□□□□□ -0.32
COPS4-211ENST00000511891 GIGYF1O75420 1035 aaPredicted RBP13.08□□□□□ -0.32
COPS4-211ENST00000511891 DALRD3Q5D0E6 543 aaKnown RBP13.08□□□□□ -0.32
COPS4-211ENST00000511891 NBPF10Q6P3W6 841 aaKnown RBP13.08□□□□□ -0.32
COPS4-211ENST00000511891 NPM2Q86SE8 214 aaKnown RBP13.08□□□□□ -0.32
COPS4-211ENST00000511891 DZIP3Q86Y13 1208 aaKnown RBP13.08□□□□□ -0.32
COPS4-211ENST00000511891 CCDC146Q8IYE0 955 aa13.08□□□□□ -0.32
COPS4-211ENST00000511891 NBPF15Q8N660 670 aa13.08□□□□□ -0.32
COPS4-211ENST00000511891 PNNQ9H307 717 aaKnown RBP13.08□□□□□ -0.32
COPS4-211ENST00000511891 SCN7AQ01118 1682 aa13.08□□□□□ -0.32
COPS4-211ENST00000511891 NRXN2Q9P2S2 1712 aa13.08□□□□□ -0.32
COPS4-211ENST00000511891 C1QTNF8P60827 252 aa13.07□□□□□ -0.32
COPS4-211ENST00000511891 RRP7AQ9Y3A4 280 aaKnown RBP13.07□□□□□ -0.32
COPS4-211ENST00000511891 CD44P16070 742 aaKnown RBP13.06□□□□□ -0.32
COPS4-211ENST00000511891 RIPK4P57078 832 aa13.06□□□□□ -0.32
COPS4-211ENST00000511891 EIF4A1P60842 406 aaKnown RBP13.06□□□□□ -0.32
COPS4-211ENST00000511891 C2CD5Q86YS7 1000 aa13.06□□□□□ -0.32
COPS4-211ENST00000511891 PNISRQ8TF01 805 aaKnown RBP13.06□□□□□ -0.32
COPS4-211ENST00000511891 GPBP1L1Q9HC44 474 aaPredicted RBP13.06□□□□□ -0.32
COPS4-211ENST00000511891 TMPOP42166 694 aaKnown RBP13.05□□□□□ -0.32
COPS4-211ENST00000511891 PRR5LQ6MZQ0 368 aa13.05□□□□□ -0.32
COPS4-211ENST00000511891 NGEFQ8N5V2 710 aa13.05□□□□□ -0.32
COPS4-211ENST00000511891 SETDB2Q96T68 719 aa13.05□□□□□ -0.32
COPS4-211ENST00000511891 KDM3BQ7LBC6 1761 aa13.04□□□□□ -0.32
COPS4-211ENST00000511891 NEUROD2Q15784 382 aa13.04□□□□□ -0.32
COPS4-211ENST00000511891 C9orf131Q5VYM1 1079 aa13.04□□□□□ -0.32
COPS4-211ENST00000511891 PRKRIP1Q9H875 184 aaPredicted RBP13.04□□□□□ -0.32
COPS4-211ENST00000511891 BCORQ6W2J9 1755 aa13.04□□□□□ -0.32
COPS4-211ENST00000511891 ARFGEF1Q9Y6D6 1849 aa13.04□□□□□ -0.32
COPS4-211ENST00000511891 H0YIN7 160 aa13.03□□□□□ -0.32
COPS4-211ENST00000511891 NPHP1O15259 732 aa13.03□□□□□ -0.32
COPS4-211ENST00000511891 WDR43Q15061 677 aaKnown RBP eCLIP13.03□□□□□ -0.32
COPS4-211ENST00000511891 CNBD1Q8NA66 436 aa13.03□□□□□ -0.32
COPS4-211ENST00000511891 TSPYL4Q9UJ04 414 aa13.03□□□□□ -0.32
COPS4-211ENST00000511891 ADAMTS8Q9UP79 889 aa13.03□□□□□ -0.32
COPS4-211ENST00000511891 ANKRD31Q8N7Z5 1873 aa13.02□□□□□ -0.32
COPS4-211ENST00000511891 SENP3-EIF4A1A0A087X0R7 540 aa13.02□□□□□ -0.33
COPS4-211ENST00000511891 RASSF7Q02833 373 aa13.02□□□□□ -0.33
COPS4-211ENST00000511891 HLFQ16534 295 aa13.02□□□□□ -0.33
COPS4-211ENST00000511891 TTLL6Q8N841 843 aa13.02□□□□□ -0.33
COPS4-211ENST00000511891 ZNF622Q969S3 477 aaKnown RBP eCLIP13.02□□□□□ -0.331e-7■■□□□ 12.1
COPS4-211ENST00000511891 BRIP1Q9BX63 1249 aa13.02□□□□□ -0.33
COPS4-211ENST00000511891 LAMB4A4D0S4 1761 aa13.02□□□□□ -0.33
COPS4-211ENST00000511891 FAM177BA6PVY3 158 aa13.01□□□□□ -0.33
COPS4-211ENST00000511891 MYL6BP14649 208 aa13.01□□□□□ -0.33
COPS4-211ENST00000511891 PDE6BP35913 854 aa13.01□□□□□ -0.33
COPS4-211ENST00000511891 CLEC4GQ6UXB4 293 aa13.01□□□□□ -0.33
COPS4-211ENST00000511891 NBPF5PQ86XG9 351 aaPredicted RBP13.01□□□□□ -0.33
COPS4-211ENST00000511891 RUNDC1Q96C34 613 aa13.01□□□□□ -0.33
COPS4-211ENST00000511891 RNF181Q9P0P0 153 aa13.01□□□□□ -0.33
COPS4-211ENST00000511891 NIP7Q9Y221 180 aaKnown RBP eCLIP13.01□□□□□ -0.33
COPS4-211ENST00000511891 ZNF652Q9Y2D9 606 aa13.01□□□□□ -0.33
COPS4-211ENST00000511891 DLEC1Q9Y238 1755 aa13□□□□□ -0.33
COPS4-211ENST00000511891 ST5P78524 1137 aa13□□□□□ -0.33
COPS4-211ENST00000511891 LMOD3Q0VAK6 560 aa13□□□□□ -0.33
COPS4-211ENST00000511891 TTLL7Q6ZT98 887 aa13□□□□□ -0.33
COPS4-211ENST00000511891 TRIM35Q9UPQ4 493 aa13□□□□□ -0.33
COPS4-211ENST00000511891 COL11A2P13942 1736 aaPredicted RBP12.99□□□□□ -0.33
COPS4-211ENST00000511891 KIF3CO14782 793 aa12.99□□□□□ -0.33
COPS4-211ENST00000511891 EIF2S2P20042 333 aaKnown RBP12.99□□□□□ -0.33
COPS4-211ENST00000511891 PRELPP51888 382 aa12.99□□□□□ -0.33
COPS4-211ENST00000511891 ANXA1P04083 346 aa12.98□□□□□ -0.33
COPS4-211ENST00000511891 KRT24Q2M2I5 525 aa12.98□□□□□ -0.33
COPS4-211ENST00000511891 NECTIN2Q92692 538 aa12.98□□□□□ -0.33
COPS4-211ENST00000511891 ZBTB3Q9H5J0 574 aa12.98□□□□□ -0.33
COPS4-211ENST00000511891 NMRK2Q9NPI5 230 aa12.98□□□□□ -0.33
COPS4-211ENST00000511891 LAS1LQ9Y4W2 734 aaKnown RBP12.98□□□□□ -0.33
COPS4-211ENST00000511891 MAP3K15Q6ZN16 1313 aa12.97□□□□□ -0.33
COPS4-211ENST00000511891 NFKBIEO00221 500 aa12.97□□□□□ -0.33
COPS4-211ENST00000511891 C21orf2O43822 256 aa12.97□□□□□ -0.33
COPS4-211ENST00000511891 SRGNP10124 158 aa12.97□□□□□ -0.33
COPS4-211ENST00000511891 ZEB1P37275 1124 aaPredicted RBP12.97□□□□□ -0.33
COPS4-211ENST00000511891 PROSER3Q2NL68 480 aa12.97□□□□□ -0.33
COPS4-211ENST00000511891 KIF6Q6ZMV9 814 aa12.97□□□□□ -0.33
COPS4-211ENST00000511891 PDZRN3Q9UPQ7 1066 aa12.97□□□□□ -0.33
COPS4-211ENST00000511891 FARP1Q9Y4F1 1045 aaPredicted RBP12.97□□□□□ -0.33
COPS4-211ENST00000511891 SBF1O95248 1867 aa12.96□□□□□ -0.33
COPS4-211ENST00000511891 ERVV-1B6SEH8 477 aa12.96□□□□□ -0.33
COPS4-211ENST00000511891 CHL1O00533 1208 aa12.96□□□□□ -0.33
COPS4-211ENST00000511891 RGL2O15211 777 aa12.96□□□□□ -0.33
COPS4-211ENST00000511891 GPTP24298 496 aa12.96□□□□□ -0.33
COPS4-211ENST00000511891 PDIA6Q15084 440 aa12.96□□□□□ -0.33
COPS4-211ENST00000511891 CCDC184Q52MB2 194 aa12.96□□□□□ -0.33
COPS4-211ENST00000511891 TPTE2Q6XPS3 522 aa12.96□□□□□ -0.33
COPS4-211ENST00000511891 MASTLQ96GX5 879 aa12.96□□□□□ -0.33
COPS4-211ENST00000511891 BABAM1Q9NWV8 329 aa12.96□□□□□ -0.33
COPS4-211ENST00000511891 APAF1O14727 1248 aa12.95□□□□□ -0.34
COPS4-211ENST00000511891 LMNB1P20700 586 aa12.95□□□□□ -0.34
COPS4-211ENST00000511891 STYK1Q6J9G0 422 aa12.95□□□□□ -0.34
COPS4-211ENST00000511891 PRPF40BQ6NWY9 871 aaKnown RBP12.95□□□□□ -0.34
COPS4-211ENST00000511891 LRP10Q7Z4F1 713 aa12.95□□□□□ -0.34
COPS4-211ENST00000511891 NUTM1Q86Y26 1132 aa12.95□□□□□ -0.34
COPS4-211ENST00000511891 CNKSR1Q969H4 720 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms