RNA–Protein interactions for RNA: ENST00000511873.6

SMN2-211, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 431 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-211ENST00000511873 ADH6P28332 368 aa11.19□□□□□ -0.62
SMN2-211ENST00000511873 LAMC2Q13753 1193 aa11.19□□□□□ -0.62
SMN2-211ENST00000511873 C7orf43Q8WVR3 580 aa11.19□□□□□ -0.62
SMN2-211ENST00000511873 BTBD6Q96KE9 485 aa11.19□□□□□ -0.62
SMN2-211ENST00000511873 GPC6Q9Y625 555 aaPredicted RBP11.19□□□□□ -0.62
SMN2-211ENST00000511873 AVENQ9NQS1 362 aaPredicted RBP11.18□□□□□ -0.62
SMN2-211ENST00000511873 HCN4Q9Y3Q4 1203 aa11.18□□□□□ -0.62
SMN2-211ENST00000511873 EFSO43281 561 aa11.17□□□□□ -0.62
SMN2-211ENST00000511873 DKK1O94907 266 aa11.17□□□□□ -0.62
SMN2-211ENST00000511873 LARP1Q6PKG0 1096 aaKnown RBP11.17□□□□□ -0.62
SMN2-211ENST00000511873 RHPN1Q8TCX5 695 aa11.17□□□□□ -0.62
SMN2-211ENST00000511873 PPP1R12CQ9BZL4 782 aa11.17□□□□□ -0.62
SMN2-211ENST00000511873 STRN4Q9NRL3 753 aa11.17□□□□□ -0.62
SMN2-211ENST00000511873 KLF15Q9UIH9 416 aa11.17□□□□□ -0.62
SMN2-211ENST00000511873 C1orf53Q5VUE5 145 aa11.16□□□□□ -0.62
SMN2-211ENST00000511873 PPP1R12BO60237 982 aaPredicted RBP11.15□□□□□ -0.62
SMN2-211ENST00000511873 HIRAP54198 1017 aaPredicted RBP11.15□□□□□ -0.62
SMN2-211ENST00000511873 SEC13P55735 322 aa11.15□□□□□ -0.62
SMN2-211ENST00000511873 PCBP4P57723 403 aaKnown RBP11.15□□□□□ -0.62
SMN2-211ENST00000511873 PLA2G4EQ3MJ16 856 aa11.15□□□□□ -0.62
SMN2-211ENST00000511873 ZNF468Q5VIY5 522 aaPredicted RBP11.15□□□□□ -0.62
SMN2-211ENST00000511873 HOXB4P17483 251 aaPredicted RBP11.14□□□□□ -0.63
SMN2-211ENST00000511873 POTEAQ6S8J7 498 aa11.14□□□□□ -0.63
SMN2-211ENST00000511873 LINC00114Q6XXX2 140 aa11.14□□□□□ -0.63
SMN2-211ENST00000511873 FCHSD1Q86WN1 690 aa11.14□□□□□ -0.63
SMN2-211ENST00000511873 PHACTR1Q9C0D0 580 aa11.14□□□□□ -0.63
SMN2-211ENST00000511873 ANKIB1Q9P2G1 1089 aa11.14□□□□□ -0.63
SMN2-211ENST00000511873 ATAD2Q6PL18 1390 aa11.14□□□□□ -0.63
SMN2-211ENST00000511873 PIK3R2O00459 728 aa11.13□□□□□ -0.63
SMN2-211ENST00000511873 C21orf2O43822 256 aa11.13□□□□□ -0.63
SMN2-211ENST00000511873 LMOD1P29536 600 aaPredicted RBP11.12□□□□□ -0.63
SMN2-211ENST00000511873 KANK4Q5T7N3 995 aaPredicted RBP11.12□□□□□ -0.63
SMN2-211ENST00000511873 CHSY3Q70JA7 882 aa11.12□□□□□ -0.63
SMN2-211ENST00000511873 GAS2L2Q8NHY3 880 aa11.12□□□□□ -0.63
SMN2-211ENST00000511873 SCG3Q8WXD2 468 aaKnown RBP11.12□□□□□ -0.63
SMN2-211ENST00000511873 GNB5O14775 395 aa11.11□□□□□ -0.63
SMN2-211ENST00000511873 MSTNO14793 375 aa11.11□□□□□ -0.63
SMN2-211ENST00000511873 SFSWAPQ12872 951 aaKnown RBP11.11□□□□□ -0.63
SMN2-211ENST00000511873 PTK7Q13308 1070 aa11.11□□□□□ -0.63
SMN2-211ENST00000511873 CRTC2Q53ET0 693 aaPredicted RBP11.11□□□□□ -0.63
SMN2-211ENST00000511873 ALYREFQ86V81 257 aaKnown RBP11.11□□□□□ -0.63
SMN2-211ENST00000511873 CHMP7Q8WUX9 453 aaPredicted RBP11.11□□□□□ -0.63
SMN2-211ENST00000511873 HINFPQ9BQA5 517 aa11.11□□□□□ -0.63
SMN2-211ENST00000511873 VRTNQ9H8Y1 702 aa11.11□□□□□ -0.63
SMN2-211ENST00000511873 SUZ12Q15022 739 aaKnown RBP11.1□□□□□ -0.63
SMN2-211ENST00000511873 CEP63Q96MT8 703 aa11.1□□□□□ -0.63
SMN2-211ENST00000511873 COL8A1P27658 744 aa11.09□□□□□ -0.63
SMN2-211ENST00000511873 DGKGP49619 791 aa11.09□□□□□ -0.63
SMN2-211ENST00000511873 DPYDQ12882 1025 aa11.09□□□□□ -0.63
SMN2-211ENST00000511873 GRIN2CQ14957 1233 aa11.09□□□□□ -0.63
SMN2-211ENST00000511873 SYT9Q86SS6 491 aa11.09□□□□□ -0.63
SMN2-211ENST00000511873 ALDH16A1Q8IZ83 802 aa11.09□□□□□ -0.63
SMN2-211ENST00000511873 STAG2Q8N3U4 1231 aa11.09□□□□□ -0.63
SMN2-211ENST00000511873 HSH2DQ96JZ2 352 aa11.09□□□□□ -0.63
SMN2-211ENST00000511873 SUSD3Q96L08 255 aa11.09□□□□□ -0.63
SMN2-211ENST00000511873 C2orf49Q9BVC5 232 aaPredicted RBP11.09□□□□□ -0.63
SMN2-211ENST00000511873 ALAS2P22557 587 aa11.08□□□□□ -0.64
SMN2-211ENST00000511873 SUV39H2Q9H5I1 410 aa11.08□□□□□ -0.64
SMN2-211ENST00000511873 ZNF777Q9ULD5 760 aaPredicted RBP11.08□□□□□ -0.64
SMN2-211ENST00000511873 KRBA1A5PL33 1030 aa11.07□□□□□ -0.64
SMN2-211ENST00000511873 ITGB2P05107 769 aa11.07□□□□□ -0.64
SMN2-211ENST00000511873 ANKMY2Q8IV38 441 aa11.07□□□□□ -0.64
SMN2-211ENST00000511873 ZNF280CQ8ND82 737 aa11.07□□□□□ -0.64
SMN2-211ENST00000511873 SPOCK3Q9BQ16 436 aa11.07□□□□□ -0.64
SMN2-211ENST00000511873 BRD7Q9NPI1 651 aa11.07□□□□□ -0.64
SMN2-211ENST00000511873 ELOA3CA0A087WX78 387 aaPredicted RBP11.06□□□□□ -0.64
SMN2-211ENST00000511873 ELOA3DA6NLF2 546 aaPredicted RBP11.06□□□□□ -0.64
SMN2-211ENST00000511873 FAM196BA6NMK8 535 aa11.06□□□□□ -0.64
SMN2-211ENST00000511873 USP17L15C9J2P7 530 aa11.06□□□□□ -0.64
SMN2-211ENST00000511873 USP17L10C9JJH3 530 aa11.06□□□□□ -0.64
SMN2-211ENST00000511873 USP17L13C9JLJ4 530 aa11.06□□□□□ -0.64
SMN2-211ENST00000511873 USP17L12C9JPN9 530 aa11.06□□□□□ -0.64
SMN2-211ENST00000511873 USP17L11C9JVI0 530 aa11.06□□□□□ -0.64
SMN2-211ENST00000511873 USP17L21D6R901 530 aa11.06□□□□□ -0.64
SMN2-211ENST00000511873 USP17L18D6R9N7 530 aa11.06□□□□□ -0.64
SMN2-211ENST00000511873 USP17L22D6RA61 530 aa11.06□□□□□ -0.64
SMN2-211ENST00000511873 USP17L17D6RBQ6 530 aa11.06□□□□□ -0.64
SMN2-211ENST00000511873 USP17L19D6RCP7 530 aa11.06□□□□□ -0.64
SMN2-211ENST00000511873 USP17L20D6RJB6 530 aa11.06□□□□□ -0.64
SMN2-211ENST00000511873 SIN3BO75182 1162 aa11.06□□□□□ -0.64
SMN2-211ENST00000511873 USP17L24Q0WX57 530 aa11.06□□□□□ -0.64
SMN2-211ENST00000511873 NEUROD1Q13562 356 aa11.06□□□□□ -0.64
SMN2-211ENST00000511873 ELOA3BQ3SY89 546 aa11.06□□□□□ -0.64
SMN2-211ENST00000511873 ELOA3Q8NG57 546 aa11.06□□□□□ -0.64
SMN2-211ENST00000511873 SLC30A3Q99726 388 aa11.06□□□□□ -0.64
SMN2-211ENST00000511873 LGR5O75473 907 aa11.05□□□□□ -0.64
SMN2-211ENST00000511873 SPEM2Q0P670 501 aa11.05□□□□□ -0.64
SMN2-211ENST00000511873 HIF1AQ16665 826 aa11.05□□□□□ -0.64
SMN2-211ENST00000511873 NGLY1Q96IV0 654 aa11.05□□□□□ -0.64
SMN2-211ENST00000511873 NOP53Q9NZM5 478 aaKnown RBP11.05□□□□□ -0.64
SMN2-211ENST00000511873 KCNH4Q9UQ05 1017 aa11.04□□□□□ -0.64
SMN2-211ENST00000511873 KCNQ4P56696 695 aa11.03□□□□□ -0.64
SMN2-211ENST00000511873 TYRO3Q06418 890 aa11.03□□□□□ -0.64
SMN2-211ENST00000511873 IGFBP4P22692 258 aa11.02□□□□□ -0.65
SMN2-211ENST00000511873 BTLAQ7Z6A9 289 aa11.02□□□□□ -0.65
SMN2-211ENST00000511873 ADARB2-AS1A8MUL3 147 aa11.01□□□□□ -0.65
SMN2-211ENST00000511873 CFAP70Q5T0N1 1121 aa11.01□□□□□ -0.65
SMN2-211ENST00000511873 TNFRSF25Q93038 417 aa11.01□□□□□ -0.65
SMN2-211ENST00000511873 MDFIQ99750 246 aa11.01□□□□□ -0.65
SMN2-211ENST00000511873 PROCP04070 461 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms