RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 BRIP1Q9BX63 1249 aa21.02■□□□□ 0.96
PDLIM5-216ENST00000511767 BCS1LQ9Y276 419 aa21.02■□□□□ 0.96
PDLIM5-216ENST00000511767 ZNF652Q9Y2D9 606 aa21.02■□□□□ 0.96
PDLIM5-216ENST00000511767 ANXA1P04083 346 aa21.01■□□□□ 0.95
PDLIM5-216ENST00000511767 NECTIN2Q92692 538 aa21.01■□□□□ 0.95
PDLIM5-216ENST00000511767 MAP3K15Q6ZN16 1313 aa21.01■□□□□ 0.95
PDLIM5-216ENST00000511767 HOXB7P09629 217 aa21■□□□□ 0.95
PDLIM5-216ENST00000511767 DALRD3Q5D0E6 543 aaKnown RBP21■□□□□ 0.95
PDLIM5-216ENST00000511767 DUSP27Q5VZP5 1158 aa21■□□□□ 0.95
PDLIM5-216ENST00000511767 DDX21Q9NR30 783 aaKnown RBP eCLIP21■□□□□ 0.95
PDLIM5-216ENST00000511767 NIP7Q9Y221 180 aaKnown RBP eCLIP21■□□□□ 0.95
PDLIM5-216ENST00000511767 CARMIL3Q8ND23 1372 aa20.99■□□□□ 0.95
PDLIM5-216ENST00000511767 TPTE2Q6XPS3 522 aa20.99■□□□□ 0.95
PDLIM5-216ENST00000511767 FAM9BQ8IZU0 186 aa20.99■□□□□ 0.95
PDLIM5-216ENST00000511767 H0YIN7 160 aa20.98■□□□□ 0.95
PDLIM5-216ENST00000511767 KIF6Q6ZMV9 814 aa20.98■□□□□ 0.95
PDLIM5-216ENST00000511767 COPS6Q7L5N1 327 aa20.98■□□□□ 0.95
PDLIM5-216ENST00000511767 C2CD5Q86YS7 1000 aa20.98■□□□□ 0.95
PDLIM5-216ENST00000511767 AFDNP55196 1824 aaKnown RBP20.98■□□□□ 0.95
PDLIM5-216ENST00000511767 KIAA1551Q9HCM1 1747 aa20.98■□□□□ 0.95
PDLIM5-216ENST00000511767 N4BP2Q86UW6 1770 aaPredicted RBP20.97■□□□□ 0.95
PDLIM5-216ENST00000511767 PDE6BP35913 854 aa20.97■□□□□ 0.95
PDLIM5-216ENST00000511767 NBPF5PQ86XG9 351 aaPredicted RBP20.97■□□□□ 0.95
PDLIM5-216ENST00000511767 ZNF34Q8IZ26 560 aa20.97■□□□□ 0.95
PDLIM5-216ENST00000511767 CNBD1Q8NA66 436 aa20.97■□□□□ 0.95
PDLIM5-216ENST00000511767 C8orf58Q8NAV2 365 aa20.97■□□□□ 0.95
PDLIM5-216ENST00000511767 ZBTB3Q9H5J0 574 aa20.97■□□□□ 0.95
PDLIM5-216ENST00000511767 PDZRN3Q9UPQ7 1066 aa20.97■□□□□ 0.95
PDLIM5-216ENST00000511767 NRXN2Q9P2S2 1712 aa20.97■□□□□ 0.95
PDLIM5-216ENST00000511767 CHD4Q14839 1912 aa20.96■□□□□ 0.95
PDLIM5-216ENST00000511767 ELL2O00472 640 aaPredicted RBP20.96■□□□□ 0.95
PDLIM5-216ENST00000511767 GIGYF2Q6Y7W6 1299 aaKnown RBP20.96■□□□□ 0.95
PDLIM5-216ENST00000511767 ARHGAP27Q6ZUM4 889 aa20.96■□□□□ 0.95
PDLIM5-216ENST00000511767 ZNF784Q8NCA9 323 aaPredicted RBP20.96■□□□□ 0.95
PDLIM5-216ENST00000511767 HDGFL1Q5TGJ6 251 aa20.95■□□□□ 0.94
PDLIM5-216ENST00000511767 XAGE3Q8WTP9 111 aa20.95■□□□□ 0.94
PDLIM5-216ENST00000511767 CHPF2Q9P2E5 772 aa20.95■□□□□ 0.94
PDLIM5-216ENST00000511767 SALL2Q9Y467 1007 aaPredicted RBP20.95■□□□□ 0.94
PDLIM5-216ENST00000511767 KLRG2A4D1S0 409 aaPredicted RBP20.94■□□□□ 0.94
PDLIM5-216ENST00000511767 FAM177BA6PVY3 158 aa20.94■□□□□ 0.94
PDLIM5-216ENST00000511767 AIMP1Q12904 312 aaKnown RBP20.94■□□□□ 0.94
PDLIM5-216ENST00000511767 TTLL6Q8N841 843 aa20.94■□□□□ 0.94
PDLIM5-216ENST00000511767 DBF4Q9UBU7 674 aaPredicted RBP20.94■□□□□ 0.94
PDLIM5-216ENST00000511767 ST5P78524 1137 aa20.93■□□□□ 0.94
PDLIM5-216ENST00000511767 WDR63Q8IWG1 891 aa20.93■□□□□ 0.94
PDLIM5-216ENST00000511767 IL16Q14005 1332 aa20.93■□□□□ 0.94
PDLIM5-216ENST00000511767 LAMB4A4D0S4 1761 aa20.92■□□□□ 0.94
PDLIM5-216ENST00000511767 SRGNP10124 158 aa20.92■□□□□ 0.94
PDLIM5-216ENST00000511767 GPTP24298 496 aa20.92■□□□□ 0.94
PDLIM5-216ENST00000511767 SUSD4Q5VX71 490 aa20.92■□□□□ 0.94
PDLIM5-216ENST00000511767 TSPYL6Q8N831 410 aa20.92■□□□□ 0.94
PDLIM5-216ENST00000511767 SCN7AQ01118 1682 aa20.92■□□□□ 0.94
PDLIM5-216ENST00000511767 NPHP1O15259 732 aa20.91■□□□□ 0.94
PDLIM5-216ENST00000511767 TSR2Q969E8 191 aaKnown RBP20.91■□□□□ 0.94
PDLIM5-216ENST00000511767 ZNF622Q969S3 477 aaKnown RBP eCLIP20.91■□□□□ 0.94
PDLIM5-216ENST00000511767 HYPKQ9NX55 129 aa20.91■□□□□ 0.94
PDLIM5-216ENST00000511767 TCIRG1Q13488 830 aa20.9■□□□□ 0.94
PDLIM5-216ENST00000511767 ANKRD13DQ6ZTN6 518 aa20.9■□□□□ 0.94
PDLIM5-216ENST00000511767 UBN2Q6ZU65 1347 aa20.89■□□□□ 0.93
PDLIM5-216ENST00000511767 GTF2E1P29083 439 aaPredicted RBP20.89■□□□□ 0.93
PDLIM5-216ENST00000511767 STYK1Q6J9G0 422 aa20.89■□□□□ 0.93
PDLIM5-216ENST00000511767 NYXQ9GZU5 481 aa20.89■□□□□ 0.93
PDLIM5-216ENST00000511767 BCORQ6W2J9 1755 aa20.89■□□□□ 0.93
PDLIM5-216ENST00000511767 ATP10DQ9P241 1426 aa20.88■□□□□ 0.93
PDLIM5-216ENST00000511767 ERFEQ4G0M1 354 aa20.88■□□□□ 0.93
PDLIM5-216ENST00000511767 NUTM1Q86Y26 1132 aa20.88■□□□□ 0.93
PDLIM5-216ENST00000511767 PLBD2Q8NHP8 589 aa20.88■□□□□ 0.93
PDLIM5-216ENST00000511767 MASTLQ96GX5 879 aa20.88■□□□□ 0.93
PDLIM5-216ENST00000511767 NUP98P52948 1817 aa20.88■□□□□ 0.93
PDLIM5-216ENST00000511767 PARP10Q53GL7 1025 aa20.87■□□□□ 0.93
PDLIM5-216ENST00000511767 HSP90AB3PQ58FF7 597 aa20.87■□□□□ 0.93
PDLIM5-216ENST00000511767 SLC10A5Q5PT55 438 aa20.87■□□□□ 0.93
PDLIM5-216ENST00000511767 CNKSR1Q969H4 720 aa20.87■□□□□ 0.93
PDLIM5-216ENST00000511767 CHMP4AQ9BY43 222 aa20.87■□□□□ 0.93
PDLIM5-216ENST00000511767 BRCA1P38398 1863 aaKnown RBP20.87■□□□□ 0.93
PDLIM5-216ENST00000511767 CCER2I3L3R5 266 aa20.86■□□□□ 0.93
PDLIM5-216ENST00000511767 PPP1R42Q7Z4L9 355 aa20.86■□□□□ 0.93
PDLIM5-216ENST00000511767 PHAXQ9H814 394 aaKnown RBP20.86■□□□□ 0.93
PDLIM5-216ENST00000511767 SPINK5Q9NQ38 1064 aaPredicted RBP20.86■□□□□ 0.93
PDLIM5-216ENST00000511767 NTSR2O95665 410 aa20.85■□□□□ 0.93
PDLIM5-216ENST00000511767 NPR1P16066 1061 aa20.85■□□□□ 0.93
PDLIM5-216ENST00000511767 CCDC30Q5VVM6 783 aa20.85■□□□□ 0.93
PDLIM5-216ENST00000511767 NLRP10Q86W26 655 aa20.85■□□□□ 0.93
PDLIM5-216ENST00000511767 UTP14AQ9BVJ6 771 aaKnown RBP20.85■□□□□ 0.93
PDLIM5-216ENST00000511767 ANKRD31Q8N7Z5 1873 aa20.85■□□□□ 0.93
PDLIM5-216ENST00000511767 C7orf43Q8WVR3 580 aa20.84■□□□□ 0.93
PDLIM5-216ENST00000511767 C21orf2O43822 256 aa20.83■□□□□ 0.93
PDLIM5-216ENST00000511767 TRIM28Q13263 835 aaKnown RBP20.83■□□□□ 0.93
PDLIM5-216ENST00000511767 TWISTNBQ3B726 338 aaPredicted RBP20.83■□□□□ 0.93
PDLIM5-216ENST00000511767 ISCA1Q9BUE6 129 aa20.83■□□□□ 0.93
PDLIM5-216ENST00000511767 VAMP4O75379 141 aa20.82■□□□□ 0.92
PDLIM5-216ENST00000511767 CRY2Q49AN0 593 aa20.82■□□□□ 0.92
PDLIM5-216ENST00000511767 C9orf131Q5VYM1 1079 aa20.82■□□□□ 0.92
PDLIM5-216ENST00000511767 SYNE4Q8N205 404 aa20.82■□□□□ 0.92
PDLIM5-216ENST00000511767 ALDH1B1P30837 517 aa20.81■□□□□ 0.92
PDLIM5-216ENST00000511767 HOXA10P31260 410 aaPredicted RBP20.81■□□□□ 0.92
PDLIM5-216ENST00000511767 PRELPP51888 382 aa20.81■□□□□ 0.92
PDLIM5-216ENST00000511767 GOLGA2Q08379 1002 aa20.81■□□□□ 0.92
PDLIM5-216ENST00000511767 PRPF40BQ6NWY9 871 aaKnown RBP20.81■□□□□ 0.92
PDLIM5-216ENST00000511767 ZNF219Q9P2Y4 722 aaPredicted RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms