RNA–Protein interactions for RNA: ENST00000511708.1

COPS4-210, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 3

Gene COPS4, Length 824 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-210ENST00000511708 ABT1Q9ULW3 272 aaKnown RBP16.56■□□□□ 0.24
COPS4-210ENST00000511708 SRGNP10124 158 aa16.55■□□□□ 0.24
COPS4-210ENST00000511708 SLC39A6Q13433 755 aa16.55■□□□□ 0.24
COPS4-210ENST00000511708 VSIG10Q8N0Z9 540 aa16.55■□□□□ 0.24
COPS4-210ENST00000511708 BEGAINQ9BUH8 593 aa16.55■□□□□ 0.24
COPS4-210ENST00000511708 MCOLN1Q9GZU1 580 aa16.55■□□□□ 0.24
COPS4-210ENST00000511708 DDX21Q9NR30 783 aaKnown RBP eCLIP16.55■□□□□ 0.24
COPS4-210ENST00000511708 ECE1P42892 770 aa16.54■□□□□ 0.24
COPS4-210ENST00000511708 RNF123Q5XPI4 1314 aa16.53■□□□□ 0.24
COPS4-210ENST00000511708 CANXP27824 592 aaKnown RBP16.53■□□□□ 0.24
COPS4-210ENST00000511708 TNNT2P45379 298 aaPredicted RBP16.53■□□□□ 0.24
COPS4-210ENST00000511708 MASTLQ96GX5 879 aa16.53■□□□□ 0.24
COPS4-210ENST00000511708 GPR101Q96P66 508 aaPredicted RBP16.53■□□□□ 0.24
COPS4-210ENST00000511708 LGR6Q9HBX8 967 aa16.53■□□□□ 0.24
COPS4-210ENST00000511708 A0A087WZG4 1122 aa16.52■□□□□ 0.24
COPS4-210ENST00000511708 CCDC93Q567U6 631 aa16.52■□□□□ 0.24
COPS4-210ENST00000511708 AKAP4Q5JQC9 854 aa16.52■□□□□ 0.24
COPS4-210ENST00000511708 CYP4F22Q6NT55 531 aa16.52■□□□□ 0.24
COPS4-210ENST00000511708 TSKSQ9UJT2 592 aa16.52■□□□□ 0.24
COPS4-210ENST00000511708 BCORQ6W2J9 1755 aa16.51■□□□□ 0.23
COPS4-210ENST00000511708 FZD9O00144 591 aa16.51■□□□□ 0.23
COPS4-210ENST00000511708 FKBP4Q02790 459 aaKnown RBP eCLIP16.51■□□□□ 0.23
COPS4-210ENST00000511708 CFAP44Q96MT7 982 aa16.51■□□□□ 0.23
COPS4-210ENST00000511708 MAP2K2P36507 400 aa16.5■□□□□ 0.23
COPS4-210ENST00000511708 FMR1Q06787 632 aaKnown RBP eCLIP16.5■□□□□ 0.23
COPS4-210ENST00000511708 CNBD1Q8NA66 436 aa16.5■□□□□ 0.23
COPS4-210ENST00000511708 ZNF277Q9NRM2 450 aaPredicted RBP16.5■□□□□ 0.23
COPS4-210ENST00000511708 RNMTO43148 476 aaKnown RBP16.49■□□□□ 0.23
COPS4-210ENST00000511708 CA12O43570 354 aa16.49■□□□□ 0.23
COPS4-210ENST00000511708 SULT6B1Q6IMI4 303 aa16.49■□□□□ 0.23
COPS4-210ENST00000511708 GPC2Q8N158 579 aa16.49■□□□□ 0.23
COPS4-210ENST00000511708 CST9Q5W186 159 aa16.48■□□□□ 0.23
COPS4-210ENST00000511708 PAXIP1Q6ZW49 1069 aaPredicted RBP16.48■□□□□ 0.23
COPS4-210ENST00000511708 TLL2Q9Y6L7 1015 aa16.48■□□□□ 0.23
COPS4-210ENST00000511708 AOC2O75106 756 aa16.47■□□□□ 0.23
COPS4-210ENST00000511708 STARD3NLO95772 234 aa16.47■□□□□ 0.23
COPS4-210ENST00000511708 ST5P78524 1137 aa16.47■□□□□ 0.23
COPS4-210ENST00000511708 SETDB2Q96T68 719 aa16.47■□□□□ 0.23
COPS4-210ENST00000511708 TBC1D2BQ9UPU7 963 aa16.47■□□□□ 0.23
COPS4-210ENST00000511708 SNED1Q8TER0 1413 aa16.46■□□□□ 0.23
COPS4-210ENST00000511708 GRM1Q13255 1194 aa16.46■□□□□ 0.23
COPS4-210ENST00000511708 DGKZQ13574 1117 aa16.46■□□□□ 0.23
COPS4-210ENST00000511708 KLRG2A4D1S0 409 aaPredicted RBP16.45■□□□□ 0.22
COPS4-210ENST00000511708 CAMTA2O94983 1202 aa16.45■□□□□ 0.22
COPS4-210ENST00000511708 IL6STP40189 918 aaPredicted RBP16.45■□□□□ 0.22
COPS4-210ENST00000511708 IARSP41252 1262 aaKnown RBP16.45■□□□□ 0.22
COPS4-210ENST00000511708 OLFM4Q6UX06 510 aa16.45■□□□□ 0.22
COPS4-210ENST00000511708 RTKN2Q8IZC4 609 aa16.45■□□□□ 0.22
COPS4-210ENST00000511708 COL4A5P29400 1685 aa16.45■□□□□ 0.22
COPS4-210ENST00000511708 NPR1P16066 1061 aa16.44■□□□□ 0.22
COPS4-210ENST00000511708 IL13P35225 146 aa16.44■□□□□ 0.22
COPS4-210ENST00000511708 TRAF5O00463 557 aa16.43■□□□□ 0.22
COPS4-210ENST00000511708 BRPF1P55201 1214 aaPredicted RBP16.43■□□□□ 0.22
COPS4-210ENST00000511708 PRPF38BQ5VTL8 546 aaKnown RBP16.43■□□□□ 0.22
COPS4-210ENST00000511708 SIPA1L3O60292 1781 aaPredicted RBP16.43■□□□□ 0.22
COPS4-210ENST00000511708 HEG1Q9ULI3 1381 aa16.42■□□□□ 0.22
COPS4-210ENST00000511708 NPHP1O15259 732 aa16.42■□□□□ 0.22
COPS4-210ENST00000511708 SCNN1DP51172 638 aa16.42■□□□□ 0.22
COPS4-210ENST00000511708 SAPCD2Q86UD0 394 aa16.42■□□□□ 0.22
COPS4-210ENST00000511708 SYNE4Q8N205 404 aa16.42■□□□□ 0.22
COPS4-210ENST00000511708 HHIPL1Q96JK4 782 aa16.42■□□□□ 0.22
COPS4-210ENST00000511708 EPS15P42566 896 aa16.41■□□□□ 0.22
COPS4-210ENST00000511708 ZNF496Q96IT1 587 aaPredicted RBP16.41■□□□□ 0.22
COPS4-210ENST00000511708 PSMD1Q99460 953 aa16.41■□□□□ 0.22
COPS4-210ENST00000511708 LMOD1P29536 600 aaPredicted RBP16.4■□□□□ 0.22
COPS4-210ENST00000511708 USP50Q70EL3 339 aaPredicted RBP16.4■□□□□ 0.22
COPS4-210ENST00000511708 TEX13AQ9BXU3 409 aaPredicted RBP16.4■□□□□ 0.22
COPS4-210ENST00000511708 ZNF330Q9Y3S2 320 aaPredicted RBP16.4■□□□□ 0.22
COPS4-210ENST00000511708 TTC5Q8N0Z6 440 aa16.39■□□□□ 0.21
COPS4-210ENST00000511708 JDP2Q8WYK2 163 aa16.39■□□□□ 0.21
COPS4-210ENST00000511708 GJA3Q9Y6H8 435 aa16.39■□□□□ 0.21
COPS4-210ENST00000511708 A1BGP04217 495 aa16.38■□□□□ 0.21
COPS4-210ENST00000511708 EIF6P56537 245 aaKnown RBP16.38■□□□□ 0.21
COPS4-210ENST00000511708 SOX10P56693 466 aa16.38■□□□□ 0.21
COPS4-210ENST00000511708 MTHFSDQ2M296 383 aaKnown RBP16.38■□□□□ 0.21
COPS4-210ENST00000511708 CIAPIN1Q6FI81 312 aa16.38■□□□□ 0.21
COPS4-210ENST00000511708 NBPF5PQ86XG9 351 aaPredicted RBP16.38■□□□□ 0.21
COPS4-210ENST00000511708 ZNF790Q6PG37 636 aa16.37■□□□□ 0.21
COPS4-210ENST00000511708 CLEC4GQ6UXB4 293 aa16.37■□□□□ 0.21
COPS4-210ENST00000511708 DZIP3Q86Y13 1208 aaKnown RBP16.37■□□□□ 0.21
COPS4-210ENST00000511708 ALDH1B1P30837 517 aa16.36■□□□□ 0.21
COPS4-210ENST00000511708 CELF2O95319 508 aaKnown RBP16.35■□□□□ 0.21
COPS4-210ENST00000511708 NPM2Q86SE8 214 aaKnown RBP16.34■□□□□ 0.21
COPS4-210ENST00000511708 ZIC5Q96T25 663 aa16.34■□□□□ 0.21
COPS4-210ENST00000511708 NOGQ13253 232 aa16.33■□□□□ 0.2
COPS4-210ENST00000511708 CC2D2BQ6DHV5 1058 aa16.33■□□□□ 0.2
COPS4-210ENST00000511708 TPTE2Q6XPS3 522 aa16.33■□□□□ 0.2
COPS4-210ENST00000511708 ADARB2Q9NS39 739 aaKnown RBP16.33■□□□□ 0.2
COPS4-210ENST00000511708 PGAP2Q9UHJ9 254 aa16.33■□□□□ 0.2
COPS4-210ENST00000511708 AKAP11Q9UKA4 1901 aa16.33■□□□□ 0.2
COPS4-210ENST00000511708 RGL2O15211 777 aa16.32■□□□□ 0.2
COPS4-210ENST00000511708 HMOX1P09601 288 aa16.32■□□□□ 0.2
COPS4-210ENST00000511708 MORC1Q86VD1 984 aa16.32■□□□□ 0.2
COPS4-210ENST00000511708 GLIS2Q9BZE0 524 aaPredicted RBP16.32■□□□□ 0.2
COPS4-210ENST00000511708 GPRC5DQ9NZD1 345 aa16.32■□□□□ 0.2
COPS4-210ENST00000511708 CRY2Q49AN0 593 aa16.31■□□□□ 0.2
COPS4-210ENST00000511708 FMNL2Q96PY5 1086 aa16.31■□□□□ 0.2
COPS4-210ENST00000511708 PANK3Q9H999 370 aa16.31■□□□□ 0.2
COPS4-210ENST00000511708 ZNF652Q9Y2D9 606 aa16.31■□□□□ 0.2
COPS4-210ENST00000511708 LARGE2Q8N3Y3 721 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms