RNA–Protein interactions for RNA: ENST00000511633.5

NEK1-207, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-207ENST00000511633 RNF41Q9H4P4 317 aaPredicted RBP10.58□□□□□ -0.72
NEK1-207ENST00000511633 LIMCH1Q9UPQ0 1083 aa10.58□□□□□ -0.72
NEK1-207ENST00000511633 IBSPP21815 317 aaPredicted RBP10.57□□□□□ -0.72
NEK1-207ENST00000511633 SLF2Q8IX21 1173 aa10.57□□□□□ -0.72
NEK1-207ENST00000511633 SSRP1Q08945 709 aaKnown RBP10.57□□□□□ -0.72
NEK1-207ENST00000511633 PPFIA3O75145 1194 aa10.57□□□□□ -0.72
NEK1-207ENST00000511633 TTC22Q5TAA0 569 aa10.57□□□□□ -0.72
NEK1-207ENST00000511633 FILIP1Q7Z7B0 1213 aa10.57□□□□□ -0.72
NEK1-207ENST00000511633 RAB11FIP4Q86YS3 637 aa10.57□□□□□ -0.72
NEK1-207ENST00000511633 ABCC1P33527 1531 aa10.57□□□□□ -0.72
NEK1-207ENST00000511633 TOM1O60784 492 aa10.57□□□□□ -0.72
NEK1-207ENST00000511633 PDIA4P13667 645 aaKnown RBP10.57□□□□□ -0.72
NEK1-207ENST00000511633 RDXP35241 583 aaKnown RBP10.57□□□□□ -0.72
NEK1-207ENST00000511633 PAF1Q8N7H5 531 aa10.56□□□□□ -0.72
NEK1-207ENST00000511633 RHPN1Q8TCX5 695 aa10.56□□□□□ -0.72
NEK1-207ENST00000511633 CCDC152Q4G0S7 254 aa10.56□□□□□ -0.72
NEK1-207ENST00000511633 CHMP4BP1P59074 171 aa10.56□□□□□ -0.72
NEK1-207ENST00000511633 ST5P78524 1137 aa10.56□□□□□ -0.72
NEK1-207ENST00000511633 TTLL12Q14166 644 aaPredicted RBP10.56□□□□□ -0.72
NEK1-207ENST00000511633 CATIPQ7Z7H3 387 aa10.56□□□□□ -0.72
NEK1-207ENST00000511633 KIF21AQ7Z4S6 1674 aa10.56□□□□□ -0.72
NEK1-207ENST00000511633 MYO6Q9UM54 1294 aa10.56□□□□□ -0.72
NEK1-207ENST00000511633 EIF4G3O43432 1585 aaKnown RBP10.56□□□□□ -0.72
NEK1-207ENST00000511633 SMTNL1A8MU46 457 aa10.56□□□□□ -0.72
NEK1-207ENST00000511633 SSFA2P28290 1259 aa10.56□□□□□ -0.72
NEK1-207ENST00000511633 BMP2KLQ5H9B9 411 aa10.56□□□□□ -0.72
NEK1-207ENST00000511633 LUC7LQ9NQ29 371 aaKnown RBP10.56□□□□□ -0.72
NEK1-207ENST00000511633 ZMYM3Q14202 1370 aa10.55□□□□□ -0.72
NEK1-207ENST00000511633 NLRP5P59047 1200 aa10.55□□□□□ -0.72
NEK1-207ENST00000511633 DDB1Q16531 1140 aa10.55□□□□□ -0.72
NEK1-207ENST00000511633 MRPL50Q8N5N7 158 aaKnown RBP10.55□□□□□ -0.72
NEK1-207ENST00000511633 NFATC2IPQ8NCF5 419 aa10.55□□□□□ -0.72
NEK1-207ENST00000511633 IQSEC3Q9UPP2 1182 aaPredicted RBP10.55□□□□□ -0.72
NEK1-207ENST00000511633 EIF5P55010 431 aaKnown RBP10.55□□□□□ -0.72
NEK1-207ENST00000511633 TMEM67Q5HYA8 995 aa10.55□□□□□ -0.72
NEK1-207ENST00000511633 TBC1D2Q9BYX2 928 aa10.55□□□□□ -0.72
NEK1-207ENST00000511633 TCOF1Q13428 1488 aaKnown RBP10.55□□□□□ -0.72
NEK1-207ENST00000511633 KCNA6P17658 529 aa10.55□□□□□ -0.72
NEK1-207ENST00000511633 TNIP1Q15025 636 aa10.55□□□□□ -0.72
NEK1-207ENST00000511633 KLHL10Q6JEL2 608 aa10.55□□□□□ -0.72
NEK1-207ENST00000511633 ERCC4Q92889 916 aaPredicted RBP10.55□□□□□ -0.72
NEK1-207ENST00000511633 FLT4P35916 1363 aa10.55□□□□□ -0.72
NEK1-207ENST00000511633 NPATQ14207 1427 aa10.55□□□□□ -0.72
NEK1-207ENST00000511633 CFAP100Q494V2 611 aa10.55□□□□□ -0.72
NEK1-207ENST00000511633 CCDC181Q5TID7 509 aa10.55□□□□□ -0.72
NEK1-207ENST00000511633 ARHGAP45Q92619 1136 aa10.55□□□□□ -0.72
NEK1-207ENST00000511633 EIF2AK4Q9P2K8 1649 aaKnown RBP10.55□□□□□ -0.72
NEK1-207ENST00000511633 IL2RBP14784 551 aa10.54□□□□□ -0.72
NEK1-207ENST00000511633 GJB2P29033 226 aa10.54□□□□□ -0.72
NEK1-207ENST00000511633 SCAND2PQ9GZW5 306 aaPredicted RBP10.54□□□□□ -0.72
NEK1-207ENST00000511633 C19orf44Q9H6X5 657 aa10.54□□□□□ -0.72
NEK1-207ENST00000511633 TSPY2A6NKD2 308 aa10.54□□□□□ -0.72
NEK1-207ENST00000511633 SETDB2Q96T68 719 aa10.54□□□□□ -0.72
NEK1-207ENST00000511633 VAT1LQ9HCJ6 419 aa10.54□□□□□ -0.72
NEK1-207ENST00000511633 CCDC194A0A1B0GVG4 234 aa10.54□□□□□ -0.72
NEK1-207ENST00000511633 HMGN5P82970 282 aaKnown RBP10.54□□□□□ -0.72
NEK1-207ENST00000511633 NUCB1Q02818 461 aa10.54□□□□□ -0.72
NEK1-207ENST00000511633 WDR78Q5VTH9 848 aa10.54□□□□□ -0.72
NEK1-207ENST00000511633 LMBR1LQ6UX01 489 aa10.54□□□□□ -0.72
NEK1-207ENST00000511633 MFSD6Q6ZSS7 791 aa10.54□□□□□ -0.72
NEK1-207ENST00000511633 MICU3Q86XE3 530 aa10.54□□□□□ -0.72
NEK1-207ENST00000511633 A0A1W2PP64 1363 aa10.54□□□□□ -0.72
NEK1-207ENST00000511633 PLEKHH1Q9ULM0 1364 aa10.54□□□□□ -0.72
NEK1-207ENST00000511633 GRM8O00222 908 aa10.54□□□□□ -0.72
NEK1-207ENST00000511633 BAG3O95817 575 aa10.54□□□□□ -0.72
NEK1-207ENST00000511633 KSR2Q6VAB6 950 aa10.54□□□□□ -0.72
NEK1-207ENST00000511633 CUL5Q93034 780 aa10.54□□□□□ -0.72
NEK1-207ENST00000511633 USP16Q9Y5T5 823 aa10.54□□□□□ -0.72
NEK1-207ENST00000511633 LDHCP07864 332 aa10.53□□□□□ -0.72
NEK1-207ENST00000511633 KRT24Q2M2I5 525 aa10.53□□□□□ -0.72
NEK1-207ENST00000511633 ANKRD18AQ8IVF6 992 aa10.53□□□□□ -0.72
NEK1-207ENST00000511633 NEK1Q96PY6 1258 aa10.53□□□□□ -0.72
NEK1-207ENST00000511633 CARD14Q9BXL6 1004 aa10.53□□□□□ -0.72
NEK1-207ENST00000511633 UBA5Q9GZZ9 404 aa10.53□□□□□ -0.72
NEK1-207ENST00000511633 NIP7Q9Y221 180 aaKnown RBP eCLIP10.53□□□□□ -0.72
NEK1-207ENST00000511633 GCP02774 474 aa10.53□□□□□ -0.72
NEK1-207ENST00000511633 PARD3Q8TEW0 1356 aa10.53□□□□□ -0.72
NEK1-207ENST00000511633 UQCRFS1P1P0C7P4 283 aa10.53□□□□□ -0.72
NEK1-207ENST00000511633 PDE4BQ07343 736 aa10.53□□□□□ -0.72
NEK1-207ENST00000511633 SPTY2D1Q68D10 685 aaPredicted RBP10.53□□□□□ -0.72
NEK1-207ENST00000511633 VSIG10Q8N0Z9 540 aa10.53□□□□□ -0.72
NEK1-207ENST00000511633 SIRT1Q96EB6 747 aa10.53□□□□□ -0.72
NEK1-207ENST00000511633 TESK2Q96S53 571 aa10.53□□□□□ -0.72
NEK1-207ENST00000511633 EYA1Q99502 592 aa10.53□□□□□ -0.72
NEK1-207ENST00000511633 GDPD2Q9HCC8 539 aa10.53□□□□□ -0.72
NEK1-207ENST00000511633 PCDHB15Q9Y5E8 787 aa10.53□□□□□ -0.72
NEK1-207ENST00000511633 SDSP20132 328 aa10.53□□□□□ -0.72
NEK1-207ENST00000511633 TSPYL6Q8N831 410 aa10.53□□□□□ -0.72
NEK1-207ENST00000511633 KAT14Q9H8E8 782 aa10.53□□□□□ -0.72
NEK1-207ENST00000511633 PA2G4Q9UQ80 394 aaKnown RBP10.53□□□□□ -0.72
NEK1-207ENST00000511633 CFAP43Q8NDM7 1665 aa10.52□□□□□ -0.72
NEK1-207ENST00000511633 ATP2B3Q16720 1220 aa10.52□□□□□ -0.72
NEK1-207ENST00000511633 NCOA7Q8NI08 942 aa10.52□□□□□ -0.72
NEK1-207ENST00000511633 PHACTR3Q96KR7 559 aa10.52□□□□□ -0.72
NEK1-207ENST00000511633 ABCC2Q92887 1545 aa10.52□□□□□ -0.73
NEK1-207ENST00000511633 IARSP41252 1262 aaKnown RBP10.52□□□□□ -0.73
NEK1-207ENST00000511633 HDAC1Q13547 482 aaPredicted RBP10.52□□□□□ -0.73
NEK1-207ENST00000511633 FEZ1Q99689 392 aa10.52□□□□□ -0.73
NEK1-207ENST00000511633 TFIP11Q9UBB9 837 aaKnown RBP10.52□□□□□ -0.73
NEK1-207ENST00000511633 TNNQ9UQP3 1299 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms