RNA–Protein interactions for RNA: ENST00000511615.5

SUB1-209, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-209ENST00000511615 ZNF790Q6PG37 636 aa11.54□□□□□ -0.56
SUB1-209ENST00000511615 DNAAF4Q8WXU2 420 aa11.54□□□□□ -0.56
SUB1-209ENST00000511615 DBF4Q9UBU7 674 aaPredicted RBP11.54□□□□□ -0.56
SUB1-209ENST00000511615 ISY1Q9ULR0 285 aaKnown RBP11.54□□□□□ -0.56
SUB1-209ENST00000511615 PARP4Q9UKK3 1724 aaKnown RBP11.54□□□□□ -0.56
SUB1-209ENST00000511615 GOLGA6L3A6NEY3 463 aa11.53□□□□□ -0.56
SUB1-209ENST00000511615 MCM2P49736 904 aa11.53□□□□□ -0.56
SUB1-209ENST00000511615 DDB1Q16531 1140 aa11.53□□□□□ -0.56
SUB1-209ENST00000511615 DDX54Q8TDD1 881 aaKnown RBP11.53□□□□□ -0.56
SUB1-209ENST00000511615 TNPO1Q92973 898 aaKnown RBP11.53□□□□□ -0.56
SUB1-209ENST00000511615 GJD4Q96KN9 370 aaPredicted RBP11.53□□□□□ -0.56
SUB1-209ENST00000511615 PHAXQ9H814 394 aaKnown RBP11.53□□□□□ -0.56
SUB1-209ENST00000511615 SALL3Q9BXA9 1300 aa11.53□□□□□ -0.56
SUB1-209ENST00000511615 CACNA1FO60840 1977 aa11.53□□□□□ -0.56
SUB1-209ENST00000511615 PNMA6EA0A0J9YXQ4 647 aa11.52□□□□□ -0.56
SUB1-209ENST00000511615 GIGYF1O75420 1035 aaPredicted RBP11.52□□□□□ -0.56
SUB1-209ENST00000511615 ALDH1L1O75891 902 aa11.52□□□□□ -0.56
SUB1-209ENST00000511615 CABP4P57796 275 aa11.52□□□□□ -0.56
SUB1-209ENST00000511615 POLA2Q14181 598 aa11.52□□□□□ -0.56
SUB1-209ENST00000511615 RBM42Q9BTD8 480 aaKnown RBP11.52□□□□□ -0.56
SUB1-209ENST00000511615 TRPC5Q9UL62 973 aaPredicted RBP11.52□□□□□ -0.56
SUB1-209ENST00000511615 TRIM6-TRIM34B2RNG4 842 aa11.52□□□□□ -0.57
SUB1-209ENST00000511615 KCNQ3O43525 872 aa11.52□□□□□ -0.57
SUB1-209ENST00000511615 BEND3Q5T5X7 828 aa11.52□□□□□ -0.57
SUB1-209ENST00000511615 TNS2Q63HR2 1409 aa11.52□□□□□ -0.57
SUB1-209ENST00000511615 KIF1BPQ96EK5 621 aa11.52□□□□□ -0.57
SUB1-209ENST00000511615 ESYT1Q9BSJ8 1104 aa11.52□□□□□ -0.57
SUB1-209ENST00000511615 CHPF2Q9P2E5 772 aa11.52□□□□□ -0.57
SUB1-209ENST00000511615 AFF2P51816 1311 aa11.51□□□□□ -0.57
SUB1-209ENST00000511615 ATRNO75882 1429 aa11.51□□□□□ -0.57
SUB1-209ENST00000511615 SURF6O75683 361 aaKnown RBP11.51□□□□□ -0.57
SUB1-209ENST00000511615 DDX58O95786 925 aaKnown RBP11.51□□□□□ -0.57
SUB1-209ENST00000511615 ANAPC15P60006 121 aa11.51□□□□□ -0.57
SUB1-209ENST00000511615 MEX3CQ5U5Q3 659 aaKnown RBP11.51□□□□□ -0.57
SUB1-209ENST00000511615 PPP1R42Q7Z4L9 355 aa11.51□□□□□ -0.57
SUB1-209ENST00000511615 HYPKQ9NX55 129 aa11.51□□□□□ -0.57
SUB1-209ENST00000511615 SCN11AQ9UI33 1791 aa11.5□□□□□ -0.57
SUB1-209ENST00000511615 PI4KAP2A4QPH2 592 aa11.5□□□□□ -0.57
SUB1-209ENST00000511615 CD2BP2O95400 341 aaKnown RBP11.5□□□□□ -0.57
SUB1-209ENST00000511615 CLEC17AQ6ZS10 378 aa11.5□□□□□ -0.57
SUB1-209ENST00000511615 PI4KAP1Q8N8J0 262 aa11.5□□□□□ -0.57
SUB1-209ENST00000511615 MARCH10Q8NA82 808 aaPredicted RBP11.5□□□□□ -0.57
SUB1-209ENST00000511615 RILPL2Q969X0 211 aa11.5□□□□□ -0.57
SUB1-209ENST00000511615 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.5□□□□□ -0.57
SUB1-209ENST00000511615 BCL9O00512 1426 aa11.5□□□□□ -0.57
SUB1-209ENST00000511615 SRGAP3O43295 1099 aa11.49□□□□□ -0.57
SUB1-209ENST00000511615 CHMLP26374 656 aa11.49□□□□□ -0.57
SUB1-209ENST00000511615 KSR2Q6VAB6 950 aa11.49□□□□□ -0.57
SUB1-209ENST00000511615 RHPN1Q8TCX5 695 aa11.49□□□□□ -0.57
SUB1-209ENST00000511615 FOXD4L1Q9NU39 408 aa11.49□□□□□ -0.57
SUB1-209ENST00000511615 CCDC9Q9Y3X0 531 aaKnown RBP11.49□□□□□ -0.57
SUB1-209ENST00000511615 N4BP2Q86UW6 1770 aaPredicted RBP11.49□□□□□ -0.57
SUB1-209ENST00000511615 SIPA1L3O60292 1781 aaPredicted RBP11.49□□□□□ -0.57
SUB1-209ENST00000511615 FAM98CQ17RN3 349 aaKnown RBP11.49□□□□□ -0.57
SUB1-209ENST00000511615 ERC1Q8IUD2 1116 aa11.49□□□□□ -0.57
SUB1-209ENST00000511615 PIGBQ92521 554 aa11.49□□□□□ -0.57
SUB1-209ENST00000511615 QTRT2Q9H974 415 aaKnown RBP11.49□□□□□ -0.57
SUB1-209ENST00000511615 BRPF3Q9ULD4 1205 aa11.49□□□□□ -0.57
SUB1-209ENST00000511615 SHANK3Q9BYB0 1731 aa11.48□□□□□ -0.57
SUB1-209ENST00000511615 KDM3BQ7LBC6 1761 aa11.48□□□□□ -0.57
SUB1-209ENST00000511615 FSD2A1L4K1 749 aa11.48□□□□□ -0.57
SUB1-209ENST00000511615 SNRPA1P09661 255 aaKnown RBP11.48□□□□□ -0.57
SUB1-209ENST00000511615 SLC39A6Q13433 755 aa11.48□□□□□ -0.57
SUB1-209ENST00000511615 OS9Q13438 667 aaPredicted RBP11.48□□□□□ -0.57
SUB1-209ENST00000511615 MTX1Q13505 466 aa11.48□□□□□ -0.57
SUB1-209ENST00000511615 VSIG10Q8N0Z9 540 aa11.48□□□□□ -0.57
SUB1-209ENST00000511615 ZNF496Q96IT1 587 aaPredicted RBP11.48□□□□□ -0.57
SUB1-209ENST00000511615 FMNL2Q96PY5 1086 aa11.48□□□□□ -0.57
SUB1-209ENST00000511615 C9orf78Q9NZ63 289 aaPredicted RBP11.48□□□□□ -0.57
SUB1-209ENST00000511615 MRE11P49959 708 aa11.47□□□□□ -0.57
SUB1-209ENST00000511615 CNTROBQ8N137 903 aa11.47□□□□□ -0.57
SUB1-209ENST00000511615 GPATCH3Q96I76 525 aa11.47□□□□□ -0.57
SUB1-209ENST00000511615 TMOD3Q9NYL9 352 aa11.47□□□□□ -0.57
SUB1-209ENST00000511615 TTC41PQ6P2S7 1318 aa11.47□□□□□ -0.57
SUB1-209ENST00000511615 ZNF772Q68DY9 489 aaPredicted RBP11.46□□□□□ -0.57
SUB1-209ENST00000511615 TTC5Q8N0Z6 440 aa11.46□□□□□ -0.57
SUB1-209ENST00000511615 IL17RAQ96F46 866 aa11.46□□□□□ -0.57
SUB1-209ENST00000511615 GZF1Q9H116 711 aaPredicted RBP11.46□□□□□ -0.57
SUB1-209ENST00000511615 ANO2Q9NQ90 1003 aa11.46□□□□□ -0.57
SUB1-209ENST00000511615 DDX21Q9NR30 783 aaKnown RBP eCLIP11.46□□□□□ -0.57
SUB1-209ENST00000511615 MAP3K2Q9Y2U5 619 aa11.46□□□□□ -0.57
SUB1-209ENST00000511615 ADCY9O60503 1353 aa11.46□□□□□ -0.57
SUB1-209ENST00000511615 NBPF7P0C2Y1 421 aaPredicted RBP11.46□□□□□ -0.58
SUB1-209ENST00000511615 SSFA2P28290 1259 aa11.46□□□□□ -0.58
SUB1-209ENST00000511615 NUTM1Q86Y26 1132 aa11.46□□□□□ -0.58
SUB1-209ENST00000511615 CLASRPQ8N2M8 674 aaKnown RBP11.46□□□□□ -0.58
SUB1-209ENST00000511615 LINS1Q8NG48 757 aa11.46□□□□□ -0.58
SUB1-209ENST00000511615 IL1RAPL2Q9NP60 686 aa11.46□□□□□ -0.58
SUB1-209ENST00000511615 ATG3Q9NT62 314 aa11.46□□□□□ -0.58
SUB1-209ENST00000511615 USP42Q9H9J4 1324 aaKnown RBP11.46□□□□□ -0.58
SUB1-209ENST00000511615 GLRX3O76003 335 aaKnown RBP11.45□□□□□ -0.58
SUB1-209ENST00000511615 BAG4O95429 457 aaKnown RBP11.45□□□□□ -0.58
SUB1-209ENST00000511615 PRIM1P49642 420 aaKnown RBP11.45□□□□□ -0.58
SUB1-209ENST00000511615 NEK4P51957 841 aa11.45□□□□□ -0.58
SUB1-209ENST00000511615 PDIA6Q15084 440 aa11.45□□□□□ -0.58
SUB1-209ENST00000511615 KIAA1211Q6ZU35 1233 aa11.45□□□□□ -0.58
SUB1-209ENST00000511615 RUFY2Q8WXA3 655 aa11.45□□□□□ -0.58
SUB1-209ENST00000511615 TEX13AQ9BXU3 409 aaPredicted RBP11.45□□□□□ -0.58
SUB1-209ENST00000511615 ERBB4Q15303 1308 aa11.44□□□□□ -0.58
SUB1-209ENST00000511615 NEXNQ0ZGT2 675 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms