RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 MYOM1P52179 1685 aa8.59□□□□□ -1.03
CPNE4-208ENST00000511604 ADGBQ8N7X0 1667 aa8.59□□□□□ -1.03
CPNE4-208ENST00000511604 ANKRD33BA6NCL7 494 aa8.59□□□□□ -1.03
CPNE4-208ENST00000511604 ANKRD65E5RJM6 399 aa8.59□□□□□ -1.03
CPNE4-208ENST00000511604 SEC31AO94979 1220 aaKnown RBP8.59□□□□□ -1.03
CPNE4-208ENST00000511604 SDSP20132 328 aa8.59□□□□□ -1.03
CPNE4-208ENST00000511604 ZNF513Q8N8E2 541 aaPredicted RBP8.59□□□□□ -1.03
CPNE4-208ENST00000511604 IRX1P78414 480 aaPredicted RBP8.59□□□□□ -1.03
CPNE4-208ENST00000511604 TSHZ3Q63HK5 1081 aa8.59□□□□□ -1.03
CPNE4-208ENST00000511604 CWC27Q6UX04 472 aaKnown RBP8.59□□□□□ -1.03
CPNE4-208ENST00000511604 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.59□□□□□ -1.03
CPNE4-208ENST00000511604 FAM200AQ8TCP9 573 aa8.59□□□□□ -1.03
CPNE4-208ENST00000511604 ZNF526Q8TF50 670 aaPredicted RBP8.59□□□□□ -1.03
CPNE4-208ENST00000511604 CD109Q6YHK3 1445 aa8.59□□□□□ -1.03
CPNE4-208ENST00000511604 SHPRHQ149N8 1683 aa8.59□□□□□ -1.03
CPNE4-208ENST00000511604 CCDC141Q6ZP82 1450 aa8.59□□□□□ -1.04
CPNE4-208ENST00000511604 USP8P40818 1118 aa8.58□□□□□ -1.04
CPNE4-208ENST00000511604 CCDC27Q2M243 656 aa8.58□□□□□ -1.04
CPNE4-208ENST00000511604 TTC22Q5TAA0 569 aa8.58□□□□□ -1.04
CPNE4-208ENST00000511604 CCDC34Q96HJ3 373 aa8.58□□□□□ -1.04
CPNE4-208ENST00000511604 FAM210AQ96ND0 272 aa8.58□□□□□ -1.04
CPNE4-208ENST00000511604 SRRTQ9BXP5 876 aaKnown RBP8.58□□□□□ -1.04
CPNE4-208ENST00000511604 ORC3Q9UBD5 711 aaPredicted RBP8.58□□□□□ -1.04
CPNE4-208ENST00000511604 MKRN1Q9UHC7 482 aaKnown RBP8.58□□□□□ -1.04
CPNE4-208ENST00000511604 TCHHQ07283 1943 aa8.58□□□□□ -1.04
CPNE4-208ENST00000511604 GLI2P10070 1586 aa8.58□□□□□ -1.04
CPNE4-208ENST00000511604 A0A087WUV0 522 aaPredicted RBP8.58□□□□□ -1.04
CPNE4-208ENST00000511604 NEBLO76041 1014 aa8.58□□□□□ -1.04
CPNE4-208ENST00000511604 CCDC192P0DO97 292 aa8.58□□□□□ -1.04
CPNE4-208ENST00000511604 UBE2HP62256 183 aa8.58□□□□□ -1.04
CPNE4-208ENST00000511604 CCDC93Q567U6 631 aa8.58□□□□□ -1.04
CPNE4-208ENST00000511604 PLA2G4DQ86XP0 818 aa8.58□□□□□ -1.04
CPNE4-208ENST00000511604 MICALL1Q8N3F8 863 aa8.58□□□□□ -1.04
CPNE4-208ENST00000511604 TSPYL6Q8N831 410 aa8.58□□□□□ -1.04
CPNE4-208ENST00000511604 GIMAP7Q8NHV1 300 aa8.58□□□□□ -1.04
CPNE4-208ENST00000511604 STAG1Q8WVM7 1258 aa8.58□□□□□ -1.04
CPNE4-208ENST00000511604 SLC24A3Q9HC58 644 aa8.58□□□□□ -1.04
CPNE4-208ENST00000511604 CTAGE5O15320 804 aa8.57□□□□□ -1.04
CPNE4-208ENST00000511604 ZNF75DP51815 510 aa8.57□□□□□ -1.04
CPNE4-208ENST00000511604 PLEKHO1Q53GL0 409 aaPredicted RBP8.57□□□□□ -1.04
CPNE4-208ENST00000511604 JAKMIP3Q5VZ66 844 aa8.57□□□□□ -1.04
CPNE4-208ENST00000511604 LUZP1Q86V48 1076 aa8.57□□□□□ -1.04
CPNE4-208ENST00000511604 UBXN4Q92575 508 aa8.57□□□□□ -1.04
CPNE4-208ENST00000511604 UPF3BQ9BZI7 483 aaKnown RBP8.57□□□□□ -1.04
CPNE4-208ENST00000511604 TRIM5Q9C035 493 aa8.57□□□□□ -1.04
CPNE4-208ENST00000511604 SRCIN1Q9C0H9 1055 aa8.57□□□□□ -1.04
CPNE4-208ENST00000511604 TROQ12816 1431 aaPredicted RBP8.57□□□□□ -1.04
CPNE4-208ENST00000511604 SGSM2O43147 1006 aa8.57□□□□□ -1.04
CPNE4-208ENST00000511604 ERCC3P19447 782 aa8.57□□□□□ -1.04
CPNE4-208ENST00000511604 HNRNPH1P31943 449 aaKnown RBP8.57□□□□□ -1.04
CPNE4-208ENST00000511604 CCDC144BQ3MJ40 725 aa8.57□□□□□ -1.04
CPNE4-208ENST00000511604 CFAP70Q5T0N1 1121 aa8.57□□□□□ -1.04
CPNE4-208ENST00000511604 LRRC8AQ8IWT6 810 aa8.57□□□□□ -1.04
CPNE4-208ENST00000511604 CCDC144CPQ8IYA2 1237 aa8.57□□□□□ -1.04
CPNE4-208ENST00000511604 KAT2BQ92831 832 aa8.57□□□□□ -1.04
CPNE4-208ENST00000511604 PSMD1Q99460 953 aa8.57□□□□□ -1.04
CPNE4-208ENST00000511604 THUMPD2Q9BTF0 503 aaKnown RBP8.57□□□□□ -1.04
CPNE4-208ENST00000511604 GNL3LQ9NVN8 582 aaKnown RBP8.57□□□□□ -1.04
CPNE4-208ENST00000511604 CHMP3Q9Y3E7 222 aa8.57□□□□□ -1.04
CPNE4-208ENST00000511604 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.57□□□□□ -1.04
CPNE4-208ENST00000511604 REREQ9P2R6 1566 aa8.57□□□□□ -1.04
CPNE4-208ENST00000511604 NEMFO60524 1076 aa8.56□□□□□ -1.04
CPNE4-208ENST00000511604 IPO7O95373 1038 aaKnown RBP8.56□□□□□ -1.04
CPNE4-208ENST00000511604 TMPOP42166 694 aaKnown RBP8.56□□□□□ -1.04
CPNE4-208ENST00000511604 POTEHQ6S545 545 aa8.56□□□□□ -1.04
CPNE4-208ENST00000511604 GBP6Q6ZN66 633 aa8.56□□□□□ -1.04
CPNE4-208ENST00000511604 CCAR2Q8N163 923 aaKnown RBP8.56□□□□□ -1.04
CPNE4-208ENST00000511604 GCC1Q96CN9 775 aa8.56□□□□□ -1.04
CPNE4-208ENST00000511604 TRMT1Q9NXH9 659 aaKnown RBP8.56□□□□□ -1.04
CPNE4-208ENST00000511604 CLIP2Q9UDT6 1046 aa8.56□□□□□ -1.04
CPNE4-208ENST00000511604 TAOK2Q9UL54 1235 aa8.56□□□□□ -1.04
CPNE4-208ENST00000511604 TSPOAP1O95153 1857 aa8.56□□□□□ -1.04
CPNE4-208ENST00000511604 CROCC2H7BZ55 1655 aa8.56□□□□□ -1.04
CPNE4-208ENST00000511604 PAX7P23759 505 aa8.56□□□□□ -1.04
CPNE4-208ENST00000511604 ELF1P32519 619 aa8.56□□□□□ -1.04
CPNE4-208ENST00000511604 RBM5P52756 815 aaKnown RBP eCLIP8.56□□□□□ -1.04
CPNE4-208ENST00000511604 CUL4AQ13619 759 aa8.56□□□□□ -1.04
CPNE4-208ENST00000511604 CC2D1AQ6P1N0 951 aaPredicted RBP8.56□□□□□ -1.04
CPNE4-208ENST00000511604 KCNV1Q6PIU1 500 aa8.56□□□□□ -1.04
CPNE4-208ENST00000511604 TATDN2Q93075 761 aa8.56□□□□□ -1.04
CPNE4-208ENST00000511604 PLEKHF1Q96S99 279 aa8.56□□□□□ -1.04
CPNE4-208ENST00000511604 NUCKS1Q9H1E3 243 aaKnown RBP8.56□□□□□ -1.04
CPNE4-208ENST00000511604 A1CFQ9NQ94 594 aaKnown RBP8.56□□□□□ -1.04
CPNE4-208ENST00000511604 RPS6KL1Q9Y6S9 549 aa8.56□□□□□ -1.04
CPNE4-208ENST00000511604 ITSN2Q9NZM3 1697 aa8.56□□□□□ -1.04
CPNE4-208ENST00000511604 H3BQF6 201 aa8.55□□□□□ -1.04
CPNE4-208ENST00000511604 FIBPO43427 364 aa8.55□□□□□ -1.04
CPNE4-208ENST00000511604 ERLIN2O94905 339 aa8.55□□□□□ -1.04
CPNE4-208ENST00000511604 SKILP12757 684 aa8.55□□□□□ -1.04
CPNE4-208ENST00000511604 CAMK4Q16566 473 aa8.55□□□□□ -1.04
CPNE4-208ENST00000511604 KRT24Q2M2I5 525 aa8.55□□□□□ -1.04
CPNE4-208ENST00000511604 ERC1Q8IUD2 1116 aa8.55□□□□□ -1.04
CPNE4-208ENST00000511604 FMNL3Q8IVF7 1028 aa8.55□□□□□ -1.04
CPNE4-208ENST00000511604 INTS4Q96HW7 963 aaKnown RBP8.55□□□□□ -1.04
CPNE4-208ENST00000511604 ETAA1Q9NY74 926 aa8.55□□□□□ -1.04
CPNE4-208ENST00000511604 NSD3Q9BZ95 1437 aa8.55□□□□□ -1.04
CPNE4-208ENST00000511604 WDR33Q9C0J8 1336 aaKnown RBP8.55□□□□□ -1.04
CPNE4-208ENST00000511604 LAMC1P11047 1609 aa8.55□□□□□ -1.04
CPNE4-208ENST00000511604 RPAP1Q9BWH6 1393 aaPredicted RBP8.55□□□□□ -1.04
CPNE4-208ENST00000511604 IPO8O15397 1037 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms