RNA–Protein interactions for RNA: ENST00000511454.5

EXOSC9-210, Transcript of exosome component 9, humanhuman

TSL 5

Gene EXOSC9, Length 733 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-210ENST00000511454 NEFMP07197 916 aa16.41■□□□□ 0.22
EXOSC9-210ENST00000511454 DDX10Q13206 875 aaKnown RBP16.41■□□□□ 0.22
EXOSC9-210ENST00000511454 CCDC88AQ3V6T2 1871 aa16.41■□□□□ 0.22
EXOSC9-210ENST00000511454 SLX4Q8IY92 1834 aa16.4■□□□□ 0.22
EXOSC9-210ENST00000511454 C21orf2O43822 256 aa16.4■□□□□ 0.22
EXOSC9-210ENST00000511454 LMNB1P20700 586 aa16.4■□□□□ 0.22
EXOSC9-210ENST00000511454 EIF4A1P60842 406 aaKnown RBP16.4■□□□□ 0.22
EXOSC9-210ENST00000511454 HLFQ16534 295 aa16.4■□□□□ 0.22
EXOSC9-210ENST00000511454 CLEC4GQ6UXB4 293 aa16.4■□□□□ 0.22
EXOSC9-210ENST00000511454 MAPK8IP3Q9UPT6 1336 aa16.4■□□□□ 0.22
EXOSC9-210ENST00000511454 CACNA1SQ13698 1873 aa16.39■□□□□ 0.22
EXOSC9-210ENST00000511454 SRGNP10124 158 aa16.39■□□□□ 0.21
EXOSC9-210ENST00000511454 ST5P78524 1137 aa16.39■□□□□ 0.21
EXOSC9-210ENST00000511454 RALBP1Q15311 655 aa16.39■□□□□ 0.21
EXOSC9-210ENST00000511454 NBPF5PQ86XG9 351 aaPredicted RBP16.39■□□□□ 0.21
EXOSC9-210ENST00000511454 RRAGCQ9HB90 399 aa16.39■□□□□ 0.21
EXOSC9-210ENST00000511454 KDM2BQ8NHM5 1336 aa16.39■□□□□ 0.21
EXOSC9-210ENST00000511454 TIAM2Q8IVF5 1701 aa16.39■□□□□ 0.21
EXOSC9-210ENST00000511454 FER1L6Q2WGJ9 1857 aa16.38■□□□□ 0.21
EXOSC9-210ENST00000511454 NPHP1O15259 732 aa16.38■□□□□ 0.21
EXOSC9-210ENST00000511454 NGEFQ8N5V2 710 aa16.38■□□□□ 0.21
EXOSC9-210ENST00000511454 PNISRQ8TF01 805 aaKnown RBP16.38■□□□□ 0.21
EXOSC9-210ENST00000511454 PDZRN3Q9UPQ7 1066 aa16.38■□□□□ 0.21
EXOSC9-210ENST00000511454 NIP7Q9Y221 180 aaKnown RBP eCLIP16.38■□□□□ 0.21
EXOSC9-210ENST00000511454 ZNF652Q9Y2D9 606 aa16.38■□□□□ 0.21
EXOSC9-210ENST00000511454 TNRC6CQ9HCJ0 1690 aaKnown RBP16.37■□□□□ 0.21
EXOSC9-210ENST00000511454 FAM177BA6PVY3 158 aa16.37■□□□□ 0.21
EXOSC9-210ENST00000511454 STYK1Q6J9G0 422 aa16.37■□□□□ 0.21
EXOSC9-210ENST00000511454 PRPF40BQ6NWY9 871 aaKnown RBP16.37■□□□□ 0.21
EXOSC9-210ENST00000511454 TTLL7Q6ZT98 887 aa16.36■□□□□ 0.21
EXOSC9-210ENST00000511454 RBM46Q8TBY0 533 aaKnown RBP16.36■□□□□ 0.21
EXOSC9-210ENST00000511454 RRP7AQ9Y3A4 280 aaKnown RBP16.36■□□□□ 0.21
EXOSC9-210ENST00000511454 ZC3H4Q9UPT8 1303 aaKnown RBP16.36■□□□□ 0.21
EXOSC9-210ENST00000511454 ARFGEF2Q9Y6D5 1785 aa16.36■□□□□ 0.21
EXOSC9-210ENST00000511454 RGL2O15211 777 aa16.35■□□□□ 0.21
EXOSC9-210ENST00000511454 MYL6BP14649 208 aa16.35■□□□□ 0.21
EXOSC9-210ENST00000511454 RIPK4P57078 832 aa16.35■□□□□ 0.21
EXOSC9-210ENST00000511454 CNKSR1Q969H4 720 aa16.35■□□□□ 0.21
EXOSC9-210ENST00000511454 MASTLQ96GX5 879 aa16.35■□□□□ 0.21
EXOSC9-210ENST00000511454 PNNQ9H307 717 aaKnown RBP16.35■□□□□ 0.21
EXOSC9-210ENST00000511454 KLRG2A4D1S0 409 aaPredicted RBP16.34■□□□□ 0.21
EXOSC9-210ENST00000511454 GLTPD2A6NH11 291 aa16.34■□□□□ 0.21
EXOSC9-210ENST00000511454 TMPOP42166 694 aaKnown RBP16.34■□□□□ 0.21
EXOSC9-210ENST00000511454 C16orf71Q8IYS4 520 aaPredicted RBP16.34■□□□□ 0.21
EXOSC9-210ENST00000511454 C7orf43Q8WVR3 580 aa16.34■□□□□ 0.21
EXOSC9-210ENST00000511454 TSPYL4Q9UJ04 414 aa16.34■□□□□ 0.21
EXOSC9-210ENST00000511454 MYBBP1AQ9BQG0 1328 aaKnown RBP16.34■□□□□ 0.21
EXOSC9-210ENST00000511454 ABCC12Q96J65 1359 aa16.34■□□□□ 0.21
EXOSC9-210ENST00000511454 NUP98P52948 1817 aa16.33■□□□□ 0.21
EXOSC9-210ENST00000511454 DICER1Q9UPY3 1922 aaKnown RBP16.33■□□□□ 0.21
EXOSC9-210ENST00000511454 HTRA3P83110 453 aa16.33■□□□□ 0.2
EXOSC9-210ENST00000511454 OLFM4Q6UX06 510 aa16.33■□□□□ 0.2
EXOSC9-210ENST00000511454 TPTE2Q6XPS3 522 aa16.33■□□□□ 0.2
EXOSC9-210ENST00000511454 CCDC146Q8IYE0 955 aa16.33■□□□□ 0.2
EXOSC9-210ENST00000511454 MAP3K15Q6ZN16 1313 aa16.33■□□□□ 0.2
EXOSC9-210ENST00000511454 ERVV-1B6SEH8 477 aa16.32■□□□□ 0.2
EXOSC9-210ENST00000511454 NPR1P16066 1061 aa16.32■□□□□ 0.2
EXOSC9-210ENST00000511454 UBN2Q6ZU65 1347 aa16.32■□□□□ 0.2
EXOSC9-210ENST00000511454 LRP10Q7Z4F1 713 aa16.32■□□□□ 0.2
EXOSC9-210ENST00000511454 NUTM1Q86Y26 1132 aa16.32■□□□□ 0.2
EXOSC9-210ENST00000511454 JMYQ8N9B5 988 aa16.32■□□□□ 0.2
EXOSC9-210ENST00000511454 TAOK3Q9H2K8 898 aa16.32■□□□□ 0.2
EXOSC9-210ENST00000511454 ZBTB3Q9H5J0 574 aa16.32■□□□□ 0.2
EXOSC9-210ENST00000511454 LTBP3Q9NS15 1303 aa16.32■□□□□ 0.2
EXOSC9-210ENST00000511454 POTECB2RU33 542 aa16.31■□□□□ 0.2
EXOSC9-210ENST00000511454 GPTP24298 496 aa16.31■□□□□ 0.2
EXOSC9-210ENST00000511454 PDIA6Q15084 440 aa16.31■□□□□ 0.2
EXOSC9-210ENST00000511454 ERFEQ4G0M1 354 aa16.31■□□□□ 0.2
EXOSC9-210ENST00000511454 KLRG1Q96E93 195 aa16.31■□□□□ 0.2
EXOSC9-210ENST00000511454 ANXA1P04083 346 aa16.3■□□□□ 0.2
EXOSC9-210ENST00000511454 FSTL1Q12841 308 aa16.3■□□□□ 0.2
EXOSC9-210ENST00000511454 PROSER3Q2NL68 480 aa16.3■□□□□ 0.2
EXOSC9-210ENST00000511454 KIF6Q6ZMV9 814 aa16.3■□□□□ 0.2
EXOSC9-210ENST00000511454 VEGFAP15692 232 aaPredicted RBP16.29■□□□□ 0.2
EXOSC9-210ENST00000511454 EIF2S2P20042 333 aaKnown RBP16.29■□□□□ 0.2
EXOSC9-210ENST00000511454 NEUROD2Q15784 382 aa16.29■□□□□ 0.2
EXOSC9-210ENST00000511454 KRT24Q2M2I5 525 aa16.29■□□□□ 0.2
EXOSC9-210ENST00000511454 ERBB4Q15303 1308 aa16.28■□□□□ 0.2
EXOSC9-210ENST00000511454 GTF2E1P29083 439 aaPredicted RBP16.28■□□□□ 0.2
EXOSC9-210ENST00000511454 SOGA3Q5TF21 947 aa16.28■□□□□ 0.2
EXOSC9-210ENST00000511454 SUSD4Q5VX71 490 aa16.28■□□□□ 0.2
EXOSC9-210ENST00000511454 SLC51AQ86UW1 340 aa16.28■□□□□ 0.2
EXOSC9-210ENST00000511454 TRIM35Q9UPQ4 493 aa16.28■□□□□ 0.2
EXOSC9-210ENST00000511454 CRY2Q49AN0 593 aa16.27■□□□□ 0.2
EXOSC9-210ENST00000511454 CCDC93Q567U6 631 aa16.27■□□□□ 0.2
EXOSC9-210ENST00000511454 GIGYF2Q6Y7W6 1299 aaKnown RBP16.27■□□□□ 0.2
EXOSC9-210ENST00000511454 ZNF34Q8IZ26 560 aa16.27■□□□□ 0.2
EXOSC9-210ENST00000511454 NECTIN2Q92692 538 aa16.27■□□□□ 0.2
EXOSC9-210ENST00000511454 ADAMTS8Q9UP79 889 aa16.27■□□□□ 0.2
EXOSC9-210ENST00000511454 SNED1Q8TER0 1413 aa16.27■□□□□ 0.19
EXOSC9-210ENST00000511454 NTSR2O95665 410 aa16.26■□□□□ 0.19
EXOSC9-210ENST00000511454 LMOD3Q0VAK6 560 aa16.26■□□□□ 0.19
EXOSC9-210ENST00000511454 C3orf67Q6ZVT6 689 aa16.26■□□□□ 0.19
EXOSC9-210ENST00000511454 SMC1BQ8NDV3 1235 aa16.26■□□□□ 0.19
EXOSC9-210ENST00000511454 RUNDC1Q96C34 613 aa16.26■□□□□ 0.19
EXOSC9-210ENST00000511454 NYXQ9GZU5 481 aa16.26■□□□□ 0.19
EXOSC9-210ENST00000511454 PRKRIP1Q9H875 184 aaPredicted RBP16.26■□□□□ 0.19
EXOSC9-210ENST00000511454 ZNF277Q9NRM2 450 aaPredicted RBP16.26■□□□□ 0.19
EXOSC9-210ENST00000511454 BABAM1Q9NWV8 329 aa16.26■□□□□ 0.19
EXOSC9-210ENST00000511454 IBTKQ9P2D0 1353 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms