RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 SEC24BO95487 1268 aa15.97■□□□□ 0.15
HMGB2-205ENST00000511316 MCM4P33991 863 aa15.97■□□□□ 0.15
HMGB2-205ENST00000511316 CRKLP46109 303 aaKnown RBP15.97■□□□□ 0.15
HMGB2-205ENST00000511316 ATF7IPQ6VMQ6 1270 aa15.97■□□□□ 0.15
HMGB2-205ENST00000511316 SNX21Q969T3 373 aa15.97■□□□□ 0.15
HMGB2-205ENST00000511316 MTFR1LQ9H019 292 aa15.97■□□□□ 0.15
HMGB2-205ENST00000511316 LRP5O75197 1615 aa15.97■□□□□ 0.15
HMGB2-205ENST00000511316 PRAMEF22A3QJZ6 481 aa15.96■□□□□ 0.15
HMGB2-205ENST00000511316 RLBP1P12271 317 aa15.96■□□□□ 0.15
HMGB2-205ENST00000511316 SLC16A10Q8TF71 515 aa15.96■□□□□ 0.15
HMGB2-205ENST00000511316 SLKQ9H2G2 1235 aaPredicted RBP15.96■□□□□ 0.15
HMGB2-205ENST00000511316 SPON1Q9HCB6 807 aa15.96■□□□□ 0.15
HMGB2-205ENST00000511316 SMC4Q9NTJ3 1288 aa15.96■□□□□ 0.15
HMGB2-205ENST00000511316 RPS6KA4O75676 772 aa15.96■□□□□ 0.14
HMGB2-205ENST00000511316 HMGB2P26583 209 aaKnown RBP15.96■□□□□ 0.14
HMGB2-205ENST00000511316 SSFA2P28290 1259 aa15.96■□□□□ 0.14
HMGB2-205ENST00000511316 NEUROD2Q15784 382 aa15.96■□□□□ 0.14
HMGB2-205ENST00000511316 HEG1Q9ULI3 1381 aa15.96■□□□□ 0.14
HMGB2-205ENST00000511316 FSD2A1L4K1 749 aa15.95■□□□□ 0.14
HMGB2-205ENST00000511316 GNPATO15228 680 aa15.95■□□□□ 0.14
HMGB2-205ENST00000511316 MRE11P49959 708 aa15.95■□□□□ 0.14
HMGB2-205ENST00000511316 SKOR2Q2VWA4 1001 aaPredicted RBP15.95■□□□□ 0.14
HMGB2-205ENST00000511316 ARHGEF1Q92888 912 aaKnown RBP15.95■□□□□ 0.14
HMGB2-205ENST00000511316 AK7Q96M32 723 aa15.95■□□□□ 0.14
HMGB2-205ENST00000511316 USP16Q9Y5T5 823 aa15.95■□□□□ 0.14
HMGB2-205ENST00000511316 RBM25P49756 843 aaKnown RBP15.94■□□□□ 0.14
HMGB2-205ENST00000511316 COL24A1Q17RW2 1714 aa15.94■□□□□ 0.14
HMGB2-205ENST00000511316 PHF14O94880 888 aa15.93■□□□□ 0.14
HMGB2-205ENST00000511316 EIF4A1P60842 406 aaKnown RBP15.93■□□□□ 0.14
HMGB2-205ENST00000511316 TTC5Q8N0Z6 440 aa15.93■□□□□ 0.14
HMGB2-205ENST00000511316 FLAD1Q8NFF5 587 aa15.93■□□□□ 0.14
HMGB2-205ENST00000511316 FMNL2Q96PY5 1086 aa15.93■□□□□ 0.14
HMGB2-205ENST00000511316 GBP4Q96PP9 640 aa15.92■□□□□ 0.14
HMGB2-205ENST00000511316 ZBTB1Q9Y2K1 713 aa15.92■□□□□ 0.14
HMGB2-205ENST00000511316 CHL1O00533 1208 aa15.91■□□□□ 0.14
HMGB2-205ENST00000511316 ARHGAP45Q92619 1136 aa15.91■□□□□ 0.14
HMGB2-205ENST00000511316 GCC1Q96CN9 775 aa15.91■□□□□ 0.14
HMGB2-205ENST00000511316 RTCBQ9Y3I0 505 aaKnown RBP15.91■□□□□ 0.14
HMGB2-205ENST00000511316 TRIM27P14373 513 aa15.91■□□□□ 0.14
HMGB2-205ENST00000511316 TRAPPC3LQ5T215 181 aa15.91■□□□□ 0.14
HMGB2-205ENST00000511316 CCDC87Q9NVE4 849 aa15.91■□□□□ 0.14
HMGB2-205ENST00000511316 GIGYF1O75420 1035 aaPredicted RBP15.9■□□□□ 0.14
HMGB2-205ENST00000511316 A1BGP04217 495 aa15.9■□□□□ 0.14
HMGB2-205ENST00000511316 ZNF853P0CG23 659 aa15.9■□□□□ 0.14
HMGB2-205ENST00000511316 EIF5P55010 431 aaKnown RBP15.9■□□□□ 0.14
HMGB2-205ENST00000511316 BMP2KLQ5H9B9 411 aa15.9■□□□□ 0.14
HMGB2-205ENST00000511316 ITPRIPQ8IWB1 547 aa15.9■□□□□ 0.14
HMGB2-205ENST00000511316 SOS1Q07889 1333 aaPredicted RBP15.9■□□□□ 0.14
HMGB2-205ENST00000511316 ADRA2BP18089 450 aa15.89■□□□□ 0.13
HMGB2-205ENST00000511316 ZBTB40Q9NUA8 1239 aa15.89■□□□□ 0.13
HMGB2-205ENST00000511316 BABAM1Q9NWV8 329 aa15.89■□□□□ 0.13
HMGB2-205ENST00000511316 SNRPA1P09661 255 aaKnown RBP15.89■□□□□ 0.13
HMGB2-205ENST00000511316 NUCB1Q02818 461 aa15.89■□□□□ 0.13
HMGB2-205ENST00000511316 MSL1Q68DK7 614 aa15.89■□□□□ 0.13
HMGB2-205ENST00000511316 TEX13AQ9BXU3 409 aaPredicted RBP15.89■□□□□ 0.13
HMGB2-205ENST00000511316 TRAK2O60296 914 aa15.88■□□□□ 0.13
HMGB2-205ENST00000511316 STARD3NLO95772 234 aa15.88■□□□□ 0.13
HMGB2-205ENST00000511316 GYS1P13807 737 aa15.88■□□□□ 0.13
HMGB2-205ENST00000511316 EXOSC9Q06265 439 aaKnown RBP15.88■□□□□ 0.13
HMGB2-205ENST00000511316 LMOD3Q0VAK6 560 aa15.88■□□□□ 0.13
HMGB2-205ENST00000511316 KDM3BQ7LBC6 1761 aa15.88■□□□□ 0.13
HMGB2-205ENST00000511316 NBPF26B4DH59 902 aa15.87■□□□□ 0.13
HMGB2-205ENST00000511316 NBPF10Q6P3W6 841 aaKnown RBP15.87■□□□□ 0.13
HMGB2-205ENST00000511316 NBPF15Q8N660 670 aa15.87■□□□□ 0.13
HMGB2-205ENST00000511316 SSH1Q8WYL5 1049 aa15.87■□□□□ 0.13
HMGB2-205ENST00000511316 BCL2L12Q9HB09 334 aa15.87■□□□□ 0.13
HMGB2-205ENST00000511316 SRP68Q9UHB9 627 aaKnown RBP15.87■□□□□ 0.13
HMGB2-205ENST00000511316 MFAP1P55081 439 aaKnown RBP15.87■□□□□ 0.13
HMGB2-205ENST00000511316 BCL2L13Q9BXK5 485 aa15.87■□□□□ 0.13
HMGB2-205ENST00000511316 CLCN1P35523 988 aa15.86■□□□□ 0.13
HMGB2-205ENST00000511316 KRT24Q2M2I5 525 aa15.86■□□□□ 0.13
HMGB2-205ENST00000511316 ARXQ96QS3 562 aa15.86■□□□□ 0.13
HMGB2-205ENST00000511316 TSPYL4Q9UJ04 414 aa15.86■□□□□ 0.13
HMGB2-205ENST00000511316 USP42Q9H9J4 1324 aaKnown RBP15.85■□□□□ 0.13
HMGB2-205ENST00000511316 GOLGA6L22H0YM25 854 aa15.85■□□□□ 0.13
HMGB2-205ENST00000511316 PIP4K2AP48426 406 aaPredicted RBP15.85■□□□□ 0.13
HMGB2-205ENST00000511316 RFC4P35249 363 aa15.84■□□□□ 0.13
HMGB2-205ENST00000511316 SYT17Q9BSW7 474 aa15.84■□□□□ 0.13
HMGB2-205ENST00000511316 FHDC1Q9C0D6 1143 aaPredicted RBP15.84■□□□□ 0.13
HMGB2-205ENST00000511316 DDIT3P35638 169 aa15.84■□□□□ 0.13
HMGB2-205ENST00000511316 IL6STP40189 918 aaPredicted RBP15.84■□□□□ 0.13
HMGB2-205ENST00000511316 LRP10Q7Z4F1 713 aa15.84■□□□□ 0.13
HMGB2-205ENST00000511316 CHD1LQ86WJ1 897 aa15.84■□□□□ 0.13
HMGB2-205ENST00000511316 NOB1Q9ULX3 412 aaKnown RBP15.84■□□□□ 0.13
HMGB2-205ENST00000511316 C4AP0C0L4 1744 aa15.83■□□□□ 0.13
HMGB2-205ENST00000511316 XRCC6P12956 609 aaKnown RBP eCLIP15.83■□□□□ 0.12
HMGB2-205ENST00000511316 TM4SF1P30408 202 aa15.83■□□□□ 0.12
HMGB2-205ENST00000511316 PDIA6Q15084 440 aa15.83■□□□□ 0.12
HMGB2-205ENST00000511316 MBIPQ9NS73 344 aa15.83■□□□□ 0.12
HMGB2-205ENST00000511316 NARFQ9UHQ1 456 aa15.83■□□□□ 0.12
HMGB2-205ENST00000511316 IBTKQ9P2D0 1353 aaPredicted RBP15.83■□□□□ 0.12
HMGB2-205ENST00000511316 USPL1Q5W0Q7 1092 aa15.82■□□□□ 0.12
HMGB2-205ENST00000511316 NLGN1Q8N2Q7 840 aa15.82■□□□□ 0.12
HMGB2-205ENST00000511316 COL15A1P39059 1388 aa15.82■□□□□ 0.12
HMGB2-205ENST00000511316 UBE2Q2Q8WVN8 375 aa15.82■□□□□ 0.12
HMGB2-205ENST00000511316 GLIPR1L2Q4G1C9 344 aa15.81■□□□□ 0.12
HMGB2-205ENST00000511316 CLEC17AQ6ZS10 378 aa15.81■□□□□ 0.12
HMGB2-205ENST00000511316 TMEM57Q8N5G2 664 aa15.81■□□□□ 0.12
HMGB2-205ENST00000511316 IFT57Q9NWB7 429 aa15.81■□□□□ 0.12
HMGB2-205ENST00000511316 CAMTA2O94983 1202 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms