RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 RGL2O15211 777 aa30.56■■■□□ 2.48
SMAD5-207ENST00000511116 SRGNP10124 158 aa30.56■■■□□ 2.48
SMAD5-207ENST00000511116 NPM2Q86SE8 214 aaKnown RBP30.56■■■□□ 2.48
SMAD5-207ENST00000511116 PRAMEF22A3QJZ6 481 aa30.55■■■□□ 2.48
SMAD5-207ENST00000511116 SNRPA1P09661 255 aaKnown RBP30.55■■■□□ 2.48
SMAD5-207ENST00000511116 CNKSR1Q969H4 720 aa30.55■■■□□ 2.48
SMAD5-207ENST00000511116 HTATSF1O43719 755 aaKnown RBP30.54■■■□□ 2.48
SMAD5-207ENST00000511116 U2AF1L5P0DN76 240 aaPredicted RBP30.53■■■□□ 2.48
SMAD5-207ENST00000511116 ST5P78524 1137 aa30.53■■■□□ 2.48
SMAD5-207ENST00000511116 U2AF1Q01081 240 aaKnown RBP eCLIP30.53■■■□□ 2.48
SMAD5-207ENST00000511116 MCM10Q7L590 875 aa30.53■■■□□ 2.48
SMAD5-207ENST00000511116 DPY19L2Q6NUT2 758 aa30.52■■■□□ 2.48
SMAD5-207ENST00000511116 RTF1Q92541 710 aaKnown RBP30.52■■■□□ 2.48
SMAD5-207ENST00000511116 KLRG2A4D1S0 409 aaPredicted RBP30.51■■■□□ 2.47
SMAD5-207ENST00000511116 PIP4K2AP48426 406 aaPredicted RBP30.51■■■□□ 2.47
SMAD5-207ENST00000511116 ERFEQ4G0M1 354 aa30.51■■■□□ 2.47
SMAD5-207ENST00000511116 PRPF40BQ6NWY9 871 aaKnown RBP30.51■■■□□ 2.47
SMAD5-207ENST00000511116 MASTLQ96GX5 879 aa30.51■■■□□ 2.47
SMAD5-207ENST00000511116 TAOK3Q9H2K8 898 aa30.51■■■□□ 2.47
SMAD5-207ENST00000511116 NBPF26B4DH59 902 aa30.5■■■□□ 2.47
SMAD5-207ENST00000511116 SOGA3Q5TF21 947 aa30.5■■■□□ 2.47
SMAD5-207ENST00000511116 NBPF10Q6P3W6 841 aaKnown RBP30.5■■■□□ 2.47
SMAD5-207ENST00000511116 NBPF15Q8N660 670 aa30.5■■■□□ 2.47
SMAD5-207ENST00000511116 CACNA1SQ13698 1873 aa30.5■■■□□ 2.47
SMAD5-207ENST00000511116 C7orf43Q8WVR3 580 aa30.49■■■□□ 2.47
SMAD5-207ENST00000511116 ZNF219Q9P2Y4 722 aaPredicted RBP30.49■■■□□ 2.47
SMAD5-207ENST00000511116 ZNF652Q9Y2D9 606 aa30.49■■■□□ 2.47
SMAD5-207ENST00000511116 DCTN1Q14203 1278 aa30.47■■■□□ 2.47
SMAD5-207ENST00000511116 NPHP1O15259 732 aa30.46■■■□□ 2.47
SMAD5-207ENST00000511116 NBPF5PQ86XG9 351 aaPredicted RBP30.46■■■□□ 2.47
SMAD5-207ENST00000511116 LAMB4A4D0S4 1761 aa30.45■■■□□ 2.46
SMAD5-207ENST00000511116 TAF7Q15545 349 aaPredicted RBP30.44■■■□□ 2.46
SMAD5-207ENST00000511116 NPR1P16066 1061 aa30.43■■■□□ 2.46
SMAD5-207ENST00000511116 KDM3BQ7LBC6 1761 aa30.41■■■□□ 2.46
SMAD5-207ENST00000511116 TPTE2Q6XPS3 522 aa30.41■■■□□ 2.46
SMAD5-207ENST00000511116 DLG5Q8TDM6 1919 aa30.4■■■□□ 2.46
SMAD5-207ENST00000511116 NIP7Q9Y221 180 aaKnown RBP eCLIP30.4■■■□□ 2.46
SMAD5-207ENST00000511116 DDNO94850 711 aaPredicted RBP30.39■■■□□ 2.46
SMAD5-207ENST00000511116 CCDC93Q567U6 631 aa30.39■■■□□ 2.46
SMAD5-207ENST00000511116 COL13A1Q5TAT6 717 aaPredicted RBP30.39■■■□□ 2.46
SMAD5-207ENST00000511116 L3MBTL3Q96JM7 780 aaPredicted RBP30.38■■■□□ 2.45
SMAD5-207ENST00000511116 HLFQ16534 295 aa30.37■■■□□ 2.45
SMAD5-207ENST00000511116 CHADLQ6NUI6 762 aa30.37■■■□□ 2.45
SMAD5-207ENST00000511116 SCN4AP35499 1836 aa30.37■■■□□ 2.45
SMAD5-207ENST00000511116 SNED1Q8TER0 1413 aa30.36■■■□□ 2.45
SMAD5-207ENST00000511116 FKBP4Q02790 459 aaKnown RBP eCLIP30.35■■■□□ 2.45
SMAD5-207ENST00000511116 PNISRQ8TF01 805 aaKnown RBP30.35■■■□□ 2.45
SMAD5-207ENST00000511116 PLEKHF1Q96S99 279 aa30.35■■■□□ 2.45
SMAD5-207ENST00000511116 MIS18AQ9NYP9 233 aa30.35■■■□□ 2.45
SMAD5-207ENST00000511116 POTEIP0CG38 1075 aa30.34■■■□□ 2.45
SMAD5-207ENST00000511116 POTEJP0CG39 1038 aa30.34■■■□□ 2.45
SMAD5-207ENST00000511116 ERVV-1B6SEH8 477 aa30.33■■■□□ 2.45
SMAD5-207ENST00000511116 NUP98P52948 1817 aa30.32■■■□□ 2.44
SMAD5-207ENST00000511116 IQCA1LA6NCM1 817 aa30.32■■■□□ 2.44
SMAD5-207ENST00000511116 CRY2Q49AN0 593 aa30.32■■■□□ 2.44
SMAD5-207ENST00000511116 CREBZFQ9NS37 354 aa30.32■■■□□ 2.44
SMAD5-207ENST00000511116 RIC1Q4ADV7 1423 aa30.31■■■□□ 2.44
SMAD5-207ENST00000511116 EIF4A1P60842 406 aaKnown RBP30.31■■■□□ 2.44
SMAD5-207ENST00000511116 RTKN2Q8IZC4 609 aa30.31■■■□□ 2.44
SMAD5-207ENST00000511116 ALDH1B1P30837 517 aa30.3■■■□□ 2.44
SMAD5-207ENST00000511116 ABCC12Q96J65 1359 aa30.29■■■□□ 2.44
SMAD5-207ENST00000511116 IBTKQ9P2D0 1353 aaPredicted RBP30.29■■■□□ 2.44
SMAD5-207ENST00000511116 MAP3K15Q6ZN16 1313 aa30.29■■■□□ 2.44
SMAD5-207ENST00000511116 PASKQ96RG2 1323 aa30.29■■■□□ 2.44
SMAD5-207ENST00000511116 OLFM4Q6UX06 510 aa30.29■■■□□ 2.44
SMAD5-207ENST00000511116 TAF1DQ9H5J8 278 aaPredicted RBP30.29■■■□□ 2.44
SMAD5-207ENST00000511116 HSPA1AP0DMV8 641 aaKnown RBP30.28■■■□□ 2.44
SMAD5-207ENST00000511116 HSPA1BP0DMV9 641 aaKnown RBP30.28■■■□□ 2.44
SMAD5-207ENST00000511116 NFE2L2Q16236 605 aa30.28■■■□□ 2.44
SMAD5-207ENST00000511116 LDHDQ86WU2 507 aa30.28■■■□□ 2.44
SMAD5-207ENST00000511116 ZNF277Q9NRM2 450 aaPredicted RBP30.28■■■□□ 2.44
SMAD5-207ENST00000511116 ADAMTSL1Q8N6G6 1762 aa30.28■■■□□ 2.44
SMAD5-207ENST00000511116 ZNF541Q9H0D2 1346 aa30.27■■■□□ 2.44
SMAD5-207ENST00000511116 FAM177BA6PVY3 158 aa30.27■■■□□ 2.44
SMAD5-207ENST00000511116 NEFMP07197 916 aa30.27■■■□□ 2.44
SMAD5-207ENST00000511116 NYXQ9GZU5 481 aa30.27■■■□□ 2.44
SMAD5-207ENST00000511116 FZD9O00144 591 aa30.25■■■□□ 2.43
SMAD5-207ENST00000511116 TTLL7Q6ZT98 887 aa30.25■■■□□ 2.43
SMAD5-207ENST00000511116 PSMD1Q99460 953 aa30.25■■■□□ 2.43
SMAD5-207ENST00000511116 HOXA10P31260 410 aaPredicted RBP30.24■■■□□ 2.43
SMAD5-207ENST00000511116 IARSP41252 1262 aaKnown RBP30.24■■■□□ 2.43
SMAD5-207ENST00000511116 ERBB4Q15303 1308 aa30.23■■■□□ 2.43
SMAD5-207ENST00000511116 UBN2Q6ZU65 1347 aa30.23■■■□□ 2.43
SMAD5-207ENST00000511116 GTF2E1P29083 439 aaPredicted RBP30.23■■■□□ 2.43
SMAD5-207ENST00000511116 CC2D2BQ6DHV5 1058 aa30.22■■■□□ 2.43
SMAD5-207ENST00000511116 NUTM1Q86Y26 1132 aa30.22■■■□□ 2.43
SMAD5-207ENST00000511116 SYNE4Q8N205 404 aa30.22■■■□□ 2.43
SMAD5-207ENST00000511116 THUMPD2Q9BTF0 503 aaKnown RBP30.22■■■□□ 2.43
SMAD5-207ENST00000511116 ITGBL1O95965 494 aaPredicted RBP30.21■■■□□ 2.43
SMAD5-207ENST00000511116 KIF6Q6ZMV9 814 aa30.21■■■□□ 2.43
SMAD5-207ENST00000511116 TNS4Q8IZW8 715 aa30.21■■■□□ 2.43
SMAD5-207ENST00000511116 HACL1Q9UJ83 578 aa30.21■■■□□ 2.43
SMAD5-207ENST00000511116 RRP7AQ9Y3A4 280 aaKnown RBP30.21■■■□□ 2.43
SMAD5-207ENST00000511116 CNTNAP1P78357 1384 aa30.2■■■□□ 2.43
SMAD5-207ENST00000511116 ZNF34Q8IZ26 560 aa30.2■■■□□ 2.43
SMAD5-207ENST00000511116 NGEFQ8N5V2 710 aa30.2■■■□□ 2.43
SMAD5-207ENST00000511116 PNNQ9H307 717 aaKnown RBP30.2■■■□□ 2.43
SMAD5-207ENST00000511116 LRP10Q7Z4F1 713 aa30.19■■■□□ 2.42
SMAD5-207ENST00000511116 COL4A5P29400 1685 aa30.19■■■□□ 2.42
SMAD5-207ENST00000511116 GPC2Q8N158 579 aa30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms