RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 TMUB1Q9BVT8 246 aa11.68□□□□□ -0.54
PDPN-209ENST00000510906 MTFR1LQ9H019 292 aa11.68□□□□□ -0.54
PDPN-209ENST00000510906 PALLDQ8WX93 1383 aa11.67□□□□□ -0.54
PDPN-209ENST00000510906 PNPLA7Q6ZV29 1317 aa11.67□□□□□ -0.54
PDPN-209ENST00000510906 IL13P35225 146 aa11.67□□□□□ -0.54
PDPN-209ENST00000510906 MTHFSP49914 203 aa11.67□□□□□ -0.54
PDPN-209ENST00000510906 TTLL12Q14166 644 aaPredicted RBP11.67□□□□□ -0.54
PDPN-209ENST00000510906 TOGARAM1Q9Y4F4 1720 aa11.66□□□□□ -0.54
PDPN-209ENST00000510906 NUDT7P0C024 238 aa11.66□□□□□ -0.54
PDPN-209ENST00000510906 C6orf132Q5T0Z8 1188 aa11.66□□□□□ -0.54
PDPN-209ENST00000510906 SULT6B1Q6IMI4 303 aa11.66□□□□□ -0.54
PDPN-209ENST00000510906 GIGYF2Q6Y7W6 1299 aaKnown RBP11.66□□□□□ -0.54
PDPN-209ENST00000510906 ZDHHC16Q969W1 377 aa11.66□□□□□ -0.54
PDPN-209ENST00000510906 TFCP2L1Q9NZI6 479 aa11.66□□□□□ -0.54
PDPN-209ENST00000510906 RBM27Q9P2N5 1060 aaKnown RBP11.66□□□□□ -0.54
PDPN-209ENST00000510906 RIMBP2O15034 1052 aa11.65□□□□□ -0.54
PDPN-209ENST00000510906 PLEKHO1Q53GL0 409 aaPredicted RBP11.65□□□□□ -0.54
PDPN-209ENST00000510906 ARSIQ5FYB1 569 aa11.65□□□□□ -0.54
PDPN-209ENST00000510906 ZNF454Q8N9F8 522 aa11.65□□□□□ -0.54
PDPN-209ENST00000510906 TTC13Q8NBP0 860 aa11.65□□□□□ -0.54
PDPN-209ENST00000510906 SMARCC1Q92922 1105 aaPredicted RBP11.65□□□□□ -0.54
PDPN-209ENST00000510906 KHSRPQ92945 711 aaKnown RBP eCLIP11.65□□□□□ -0.54
PDPN-209ENST00000510906 REPIN1Q9BWE0 567 aaKnown RBP11.65□□□□□ -0.54
PDPN-209ENST00000510906 TMOD3Q9NYL9 352 aa11.65□□□□□ -0.54
PDPN-209ENST00000510906 LY75O60449 1722 aa11.65□□□□□ -0.54
PDPN-209ENST00000510906 PLEKHG2Q9H7P9 1386 aa11.65□□□□□ -0.55
PDPN-209ENST00000510906 ZNF530Q6P9A1 599 aaPredicted RBP11.64□□□□□ -0.55
PDPN-209ENST00000510906 PHOX2BQ99453 314 aa11.64□□□□□ -0.55
PDPN-209ENST00000510906 SCUBE2Q9NQ36 999 aa11.64□□□□□ -0.55
PDPN-209ENST00000510906 ASAP1Q9ULH1 1129 aa11.64□□□□□ -0.55
PDPN-209ENST00000510906 KDRP35968 1356 aa11.64□□□□□ -0.55
PDPN-209ENST00000510906 NPC1L1Q9UHC9 1359 aa11.64□□□□□ -0.55
PDPN-209ENST00000510906 AMOTQ4VCS5 1084 aa11.63□□□□□ -0.55
PDPN-209ENST00000510906 MAMSTRQ6ZN01 415 aa11.63□□□□□ -0.55
PDPN-209ENST00000510906 KDM6AO15550 1401 aaPredicted RBP11.62□□□□□ -0.55
PDPN-209ENST00000510906 HMOX1P09601 288 aa11.62□□□□□ -0.55
PDPN-209ENST00000510906 MS4A1P11836 297 aa11.62□□□□□ -0.55
PDPN-209ENST00000510906 COL23A1Q86Y22 540 aaPredicted RBP11.62□□□□□ -0.55
PDPN-209ENST00000510906 SLC16A10Q8TF71 515 aa11.62□□□□□ -0.55
PDPN-209ENST00000510906 DCAF5Q96JK2 942 aa11.62□□□□□ -0.55
PDPN-209ENST00000510906 ARXQ96QS3 562 aa11.62□□□□□ -0.55
PDPN-209ENST00000510906 ADAM33Q9BZ11 813 aa11.62□□□□□ -0.55
PDPN-209ENST00000510906 FHDC1Q9C0D6 1143 aaPredicted RBP11.62□□□□□ -0.55
PDPN-209ENST00000510906 GOPCQ9HD26 462 aa11.62□□□□□ -0.55
PDPN-209ENST00000510906 ATG3Q9NT62 314 aa11.62□□□□□ -0.55
PDPN-209ENST00000510906 LOC102724428A0A0B4J2F2 783 aa11.61□□□□□ -0.55
PDPN-209ENST00000510906 DIAPH1O60610 1272 aaKnown RBP11.61□□□□□ -0.55
PDPN-209ENST00000510906 HSP90AB1P08238 724 aaKnown RBP11.61□□□□□ -0.55
PDPN-209ENST00000510906 CLCN1P35523 988 aa11.61□□□□□ -0.55
PDPN-209ENST00000510906 SIK1P57059 783 aa11.61□□□□□ -0.55
PDPN-209ENST00000510906 C1orf141Q5JVX7 400 aa11.61□□□□□ -0.55
PDPN-209ENST00000510906 METTL3Q86U44 580 aaKnown RBP11.61□□□□□ -0.55
PDPN-209ENST00000510906 ITGB4P16144 1822 aa11.6□□□□□ -0.55
PDPN-209ENST00000510906 ERVV-2B6SEH9 535 aa11.6□□□□□ -0.55
PDPN-209ENST00000510906 ITPK1Q13572 414 aa11.6□□□□□ -0.55
PDPN-209ENST00000510906 PADI6Q6TGC4 694 aa11.6□□□□□ -0.55
PDPN-209ENST00000510906 SMIM5Q71RC9 77 aa11.6□□□□□ -0.55
PDPN-209ENST00000510906 AMIGO3Q86WK7 504 aa11.6□□□□□ -0.55
PDPN-209ENST00000510906 LINC00116Q8NCU8 138 aa11.6□□□□□ -0.55
PDPN-209ENST00000510906 SYT17Q9BSW7 474 aa11.6□□□□□ -0.55
PDPN-209ENST00000510906 GPCPD1Q9NPB8 672 aa11.6□□□□□ -0.55
PDPN-209ENST00000510906 COL3A1P02461 1466 aaPredicted RBP11.59□□□□□ -0.55
PDPN-209ENST00000510906 TUBGCP6Q96RT7 1819 aa11.59□□□□□ -0.55
PDPN-209ENST00000510906 CABP4P57796 275 aa11.59□□□□□ -0.55
PDPN-209ENST00000510906 MSL1Q68DK7 614 aa11.59□□□□□ -0.55
PDPN-209ENST00000510906 ADGRG1Q9Y653 693 aa11.59□□□□□ -0.55
PDPN-209ENST00000510906 C5P01031 1676 aa11.59□□□□□ -0.55
PDPN-209ENST00000510906 QSER1Q2KHR3 1735 aa11.58□□□□□ -0.56
PDPN-209ENST00000510906 OATP04181 439 aa11.58□□□□□ -0.56
PDPN-209ENST00000510906 POLD1P28340 1107 aa11.58□□□□□ -0.56
PDPN-209ENST00000510906 ATP6V1AP38606 617 aa11.58□□□□□ -0.56
PDPN-209ENST00000510906 SLC4A9Q96Q91 983 aa11.58□□□□□ -0.56
PDPN-209ENST00000510906 PCDH10Q9P2E7 1040 aa11.58□□□□□ -0.56
PDPN-209ENST00000510906 U2SURPO15042 1029 aaKnown RBP11.57□□□□□ -0.56
PDPN-209ENST00000510906 HMGB2P26583 209 aaKnown RBP11.57□□□□□ -0.56
PDPN-209ENST00000510906 AKAP4Q5JQC9 854 aa11.57□□□□□ -0.56
PDPN-209ENST00000510906 FLAD1Q8NFF5 587 aa11.57□□□□□ -0.56
PDPN-209ENST00000510906 PXYLP1Q8TE99 480 aa11.57□□□□□ -0.56
PDPN-209ENST00000510906 C4BP0C0L5 1744 aa11.57□□□□□ -0.56
PDPN-209ENST00000510906 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.56□□□□□ -0.56
PDPN-209ENST00000510906 MDM2Q00987 491 aaPredicted RBP11.56□□□□□ -0.56
PDPN-209ENST00000510906 MTHFSDQ2M296 383 aaKnown RBP11.56□□□□□ -0.56
PDPN-209ENST00000510906 ZNF710Q8N1W2 664 aa11.56□□□□□ -0.56
PDPN-209ENST00000510906 NFATC2IPQ8NCF5 419 aa11.56□□□□□ -0.56
PDPN-209ENST00000510906 LGR6Q9HBX8 967 aa11.56□□□□□ -0.56
PDPN-209ENST00000510906 LHX6Q9UPM6 363 aa11.56□□□□□ -0.56
PDPN-209ENST00000510906 MAP3K5Q99683 1374 aa11.55□□□□□ -0.56
PDPN-209ENST00000510906 PTCD1O75127 700 aaKnown RBP11.55□□□□□ -0.56
PDPN-209ENST00000510906 SSFA2P28290 1259 aa11.55□□□□□ -0.56
PDPN-209ENST00000510906 PPP2R1AP30153 589 aa11.55□□□□□ -0.56
PDPN-209ENST00000510906 PRSS12P56730 875 aa11.55□□□□□ -0.56
PDPN-209ENST00000510906 FAM161AQ3B820 660 aa11.55□□□□□ -0.56
PDPN-209ENST00000510906 BCL2L12Q9HB09 334 aa11.55□□□□□ -0.56
PDPN-209ENST00000510906 GOLGB1Q14789 3259 aaKnown RBP11.55□□□□□ -0.56
PDPN-209ENST00000510906 TAF1LQ8IZX4 1826 aa11.54□□□□□ -0.56
PDPN-209ENST00000510906 RNMTO43148 476 aaKnown RBP11.54□□□□□ -0.56
PDPN-209ENST00000510906 COL24A1Q17RW2 1714 aa11.53□□□□□ -0.56
PDPN-209ENST00000510906 PPP4R3BQ5MIZ7 849 aa11.53□□□□□ -0.56
PDPN-209ENST00000510906 NLGN2Q8NFZ4 835 aa11.53□□□□□ -0.56
PDPN-209ENST00000510906 CDCA7LQ96GN5 454 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms