RNA–Protein interactions for RNA: ENST00000509978.1

SPOCK1-207, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-207ENST00000509978 WWC3Q9ULE0 1092 aa12.59□□□□□ -0.39
SPOCK1-207ENST00000509978 RPLP1P05386 114 aaKnown RBP12.58□□□□□ -0.4
SPOCK1-207ENST00000509978 PCSK2P16519 638 aa12.58□□□□□ -0.4
SPOCK1-207ENST00000509978 PSMD2Q13200 908 aa12.58□□□□□ -0.4
SPOCK1-207ENST00000509978 RHBDD1Q8TEB9 315 aa12.58□□□□□ -0.4
SPOCK1-207ENST00000509978 FRMD6Q96NE9 622 aa12.58□□□□□ -0.4
SPOCK1-207ENST00000509978 KLK14Q9P0G3 267 aa12.58□□□□□ -0.4
SPOCK1-207ENST00000509978 MEN1O00255 615 aa12.57□□□□□ -0.4
SPOCK1-207ENST00000509978 NEFLP07196 543 aa12.57□□□□□ -0.4
SPOCK1-207ENST00000509978 GPC1P35052 558 aa12.57□□□□□ -0.4
SPOCK1-207ENST00000509978 TMEM87AQ8NBN3 555 aa12.57□□□□□ -0.4
SPOCK1-207ENST00000509978 SNIP1Q8TAD8 396 aaKnown RBP12.57□□□□□ -0.4
SPOCK1-207ENST00000509978 ITPKCQ96DU7 683 aa12.57□□□□□ -0.4
SPOCK1-207ENST00000509978 FAM161BQ96MY7 647 aa12.57□□□□□ -0.4
SPOCK1-207ENST00000509978 FAM13BQ9NYF5 915 aa12.57□□□□□ -0.4
SPOCK1-207ENST00000509978 PNMA6FA0A0J9YX94 578 aa12.56□□□□□ -0.4
SPOCK1-207ENST00000509978 GTF2E1P29083 439 aaPredicted RBP12.56□□□□□ -0.4
SPOCK1-207ENST00000509978 SF3A1Q15459 793 aaKnown RBP12.56□□□□□ -0.4
SPOCK1-207ENST00000509978 ZNF598Q86UK7 904 aaKnown RBP12.56□□□□□ -0.4
SPOCK1-207ENST00000509978 METTL16Q86W50 562 aaKnown RBP12.56□□□□□ -0.4
SPOCK1-207ENST00000509978 PARP3Q9Y6F1 533 aa12.56□□□□□ -0.4
SPOCK1-207ENST00000509978 ZIC2O95409 532 aaPredicted RBP12.55□□□□□ -0.4
SPOCK1-207ENST00000509978 HIF1AQ16665 826 aa12.55□□□□□ -0.4
SPOCK1-207ENST00000509978 TMEM214Q6NUQ4 689 aaKnown RBP12.55□□□□□ -0.4
SPOCK1-207ENST00000509978 TREML1Q86YW5 311 aa12.55□□□□□ -0.4
SPOCK1-207ENST00000509978 CSRNP1Q96S65 589 aa12.55□□□□□ -0.4
SPOCK1-207ENST00000509978 GRIP2Q9C0E4 1043 aa12.55□□□□□ -0.4
SPOCK1-207ENST00000509978 DNAJC25Q9H1X3 360 aa12.55□□□□□ -0.4
SPOCK1-207ENST00000509978 GNA15P30679 374 aa12.54□□□□□ -0.4
SPOCK1-207ENST00000509978 RAD51AP2Q09MP3 1159 aa12.54□□□□□ -0.4
SPOCK1-207ENST00000509978 C7orf43Q8WVR3 580 aa12.54□□□□□ -0.4
SPOCK1-207ENST00000509978 CFHR5Q9BXR6 569 aa12.54□□□□□ -0.4
SPOCK1-207ENST00000509978 RNF19AQ9NV58 838 aa12.54□□□□□ -0.4
SPOCK1-207ENST00000509978 PKD2L1Q9P0L9 805 aa12.54□□□□□ -0.4
SPOCK1-207ENST00000509978 GPC6Q9Y625 555 aaPredicted RBP12.54□□□□□ -0.4
SPOCK1-207ENST00000509978 PIK3R5Q8WYR1 880 aa12.53□□□□□ -0.4
SPOCK1-207ENST00000509978 AGBL1Q96MI9 1066 aa12.53□□□□□ -0.4
SPOCK1-207ENST00000509978 VTI1BQ9UEU0 232 aa12.53□□□□□ -0.4
SPOCK1-207ENST00000509978 FANCCQ00597 558 aa12.52□□□□□ -0.41
SPOCK1-207ENST00000509978 ZNF697Q5TEC3 545 aa12.52□□□□□ -0.41
SPOCK1-207ENST00000509978 RNF34Q969K3 372 aa12.52□□□□□ -0.41
SPOCK1-207ENST00000509978 SETDB2Q96T68 719 aa12.52□□□□□ -0.41
SPOCK1-207ENST00000509978 BCS1LQ9Y276 419 aa12.52□□□□□ -0.41
SPOCK1-207ENST00000509978 RNF144AP50876 292 aaPredicted RBP12.51□□□□□ -0.41
SPOCK1-207ENST00000509978 WDR4P57081 412 aaKnown RBP12.51□□□□□ -0.41
SPOCK1-207ENST00000509978 RELBQ01201 579 aa12.51□□□□□ -0.41
SPOCK1-207ENST00000509978 GNASQ5JWF2 1037 aa12.51□□□□□ -0.41
SPOCK1-207ENST00000509978 IER5Q5VY09 327 aa12.51□□□□□ -0.41
SPOCK1-207ENST00000509978 UBXN4Q92575 508 aa12.51□□□□□ -0.41
SPOCK1-207ENST00000509978 NUDT16Q96DE0 195 aaKnown RBP12.51□□□□□ -0.41
SPOCK1-207ENST00000509978 ZFAND3Q9H8U3 227 aa12.51□□□□□ -0.41
SPOCK1-207ENST00000509978 ZDHHC3Q9NYG2 299 aa12.51□□□□□ -0.41
SPOCK1-207ENST00000509978 AK5Q9Y6K8 562 aa12.51□□□□□ -0.41
SPOCK1-207ENST00000509978 MICAL2O94851 1124 aa12.5□□□□□ -0.41
SPOCK1-207ENST00000509978 TIMP2P16035 220 aa12.5□□□□□ -0.41
SPOCK1-207ENST00000509978 TXLNAP40222 546 aa12.5□□□□□ -0.41
SPOCK1-207ENST00000509978 C9orf131Q5VYM1 1079 aa12.5□□□□□ -0.41
SPOCK1-207ENST00000509978 NT5DC4Q86YG4 428 aa12.5□□□□□ -0.41
SPOCK1-207ENST00000509978 GPR152Q8TDT2 470 aa12.5□□□□□ -0.41
SPOCK1-207ENST00000509978 GGNBP2Q9H3C7 697 aa12.5□□□□□ -0.41
SPOCK1-207ENST00000509978 TGFBR3LH3BV60 316 aa12.49□□□□□ -0.41
SPOCK1-207ENST00000509978 EIF1AYO14602 144 aaKnown RBP12.49□□□□□ -0.41
SPOCK1-207ENST00000509978 TTC16Q8NEE8 873 aa12.49□□□□□ -0.41
SPOCK1-207ENST00000509978 TGIF2Q9GZN2 237 aa12.49□□□□□ -0.41
SPOCK1-207ENST00000509978 ZNF395Q9H8N7 513 aaPredicted RBP12.49□□□□□ -0.41
SPOCK1-207ENST00000509978 XKR5Q6UX68 686 aa12.48□□□□□ -0.41
SPOCK1-207ENST00000509978 SPATA31C2B4DYI2 1134 aa12.47□□□□□ -0.41
SPOCK1-207ENST00000509978 OPLAHO14841 1288 aa12.47□□□□□ -0.41
SPOCK1-207ENST00000509978 ZNF76P36508 570 aa12.47□□□□□ -0.41
SPOCK1-207ENST00000509978 NBPF1Q3BBV0 1214 aa12.47□□□□□ -0.41
SPOCK1-207ENST00000509978 C4orf17Q53FE4 359 aa12.47□□□□□ -0.41
SPOCK1-207ENST00000509978 MEIOBQ8N635 442 aa12.47□□□□□ -0.41
SPOCK1-207ENST00000509978 SLC43A3Q8NBI5 491 aa12.47□□□□□ -0.41
SPOCK1-207ENST00000509978 DMGDHQ9UI17 866 aaKnown RBP12.47□□□□□ -0.41
SPOCK1-207ENST00000509978 FOXC1Q12948 553 aa12.46□□□□□ -0.41
SPOCK1-207ENST00000509978 ORC1Q13415 861 aa12.46□□□□□ -0.41
SPOCK1-207ENST00000509978 SLC27A3Q5K4L6 730 aa12.46□□□□□ -0.41
SPOCK1-207ENST00000509978 RHPN1Q8TCX5 695 aa12.46□□□□□ -0.41
SPOCK1-207ENST00000509978 CRELD1Q96HD1 420 aa12.46□□□□□ -0.41
SPOCK1-207ENST00000509978 SPG7Q9UQ90 795 aa12.46□□□□□ -0.41
SPOCK1-207ENST00000509978 GIPC1O14908 333 aa12.45□□□□□ -0.42
SPOCK1-207ENST00000509978 CPNE3O75131 537 aaKnown RBP12.45□□□□□ -0.42
SPOCK1-207ENST00000509978 C8orf34Q49A92 452 aa12.45□□□□□ -0.42
SPOCK1-207ENST00000509978 TSEN34Q9BSV6 310 aaKnown RBP12.45□□□□□ -0.42
SPOCK1-207ENST00000509978 J3QL48 77 aa12.44□□□□□ -0.42
SPOCK1-207ENST00000509978 PLA2G4AP47712 749 aa12.44□□□□□ -0.42
SPOCK1-207ENST00000509978 SUSD3Q96L08 255 aa12.44□□□□□ -0.42
SPOCK1-207ENST00000509978 ANKIB1Q9P2G1 1089 aa12.44□□□□□ -0.42
SPOCK1-207ENST00000509978 SPINT1O43278 529 aa12.43□□□□□ -0.42
SPOCK1-207ENST00000509978 WDR44Q5JSH3 913 aa12.43□□□□□ -0.42
SPOCK1-207ENST00000509978 SPNS2Q8IVW8 549 aa12.43□□□□□ -0.42
SPOCK1-207ENST00000509978 TOR4AQ9NXH8 423 aa12.43□□□□□ -0.42
SPOCK1-207ENST00000509978 V9GY48 417 aaPredicted RBP12.43□□□□□ -0.42
SPOCK1-207ENST00000509978 TTC24A2A3L6 582 aaPredicted RBP12.42□□□□□ -0.42
SPOCK1-207ENST00000509978 GDF9O60383 454 aa12.42□□□□□ -0.42
SPOCK1-207ENST00000509978 CTSHP09668 335 aa12.42□□□□□ -0.42
SPOCK1-207ENST00000509978 TINF2Q9BSI4 451 aa12.42□□□□□ -0.42
SPOCK1-207ENST00000509978 FNDC3AQ9Y2H6 1198 aaKnown RBP12.42□□□□□ -0.42
SPOCK1-207ENST00000509978 TATP17735 454 aaPredicted RBP12.41□□□□□ -0.42
SPOCK1-207ENST00000509978 CYP4X1Q8N118 509 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms