RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-223	ENST00000509900		A0A1W2PP64	1363 aa		13.72	□□□□□ -0.21
PTPN20-223	ENST00000509900	RTL1	A6NKG5	1358 aa		13.72	□□□□□ -0.21
PTPN20-223	ENST00000509900	RPS6KA4	O75676	772 aa		13.72	□□□□□ -0.21
PTPN20-223	ENST00000509900	RC3H1	Q5TC82	1133 aa	Known RBP	13.72	□□□□□ -0.21
PTPN20-223	ENST00000509900	TMOD3	Q9NYL9	352 aa		13.72	□□□□□ -0.21
PTPN20-223	ENST00000509900	CNTNAP4	Q9C0A0	1308 aa		13.71	□□□□□ -0.21
PTPN20-223	ENST00000509900		G3V3G9	751 aa		13.71	□□□□□ -0.21
PTPN20-223	ENST00000509900	DEFB115	Q30KQ5	88 aa		13.71	□□□□□ -0.21
PTPN20-223	ENST00000509900	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.71	□□□□□ -0.21
PTPN20-223	ENST00000509900	LDHD	Q86WU2	507 aa		13.71	□□□□□ -0.21
PTPN20-223	ENST00000509900	MCOLN1	Q9GZU1	580 aa		13.71	□□□□□ -0.21
PTPN20-223	ENST00000509900	SLC12A5	Q9H2X9	1139 aa		13.71	□□□□□ -0.21
PTPN20-223	ENST00000509900	SRP68	Q9UHB9	627 aa	Known RBP	13.71	□□□□□ -0.21
PTPN20-223	ENST00000509900	POLRMT	O00411	1230 aa	Known RBP	13.7	□□□□□ -0.22
PTPN20-223	ENST00000509900	SMG6	Q86US8	1419 aa	Known RBP	13.7	□□□□□ -0.22
PTPN20-223	ENST00000509900	DDN	O94850	711 aa	Predicted RBP	13.69	□□□□□ -0.22
PTPN20-223	ENST00000509900	PRPF38B	Q5VTL8	546 aa	Known RBP	13.69	□□□□□ -0.22
PTPN20-223	ENST00000509900	TMC1	Q8TDI8	760 aa		13.69	□□□□□ -0.22
PTPN20-223	ENST00000509900	MARVELD3	Q96A59	401 aa		13.69	□□□□□ -0.22
PTPN20-223	ENST00000509900	TSKS	Q9UJT2	592 aa		13.69	□□□□□ -0.22
PTPN20-223	ENST00000509900	USP42	Q9H9J4	1324 aa	Known RBP	13.68	□□□□□ -0.22
PTPN20-223	ENST00000509900	CACNA1S	Q13698	1873 aa		13.68	□□□□□ -0.22
PTPN20-223	ENST00000509900	RRS1	Q15050	365 aa	Known RBP	13.68	□□□□□ -0.22
PTPN20-223	ENST00000509900	ERFE	Q4G0M1	354 aa		13.68	□□□□□ -0.22
PTPN20-223	ENST00000509900	TTLL6	Q8N841	843 aa		13.68	□□□□□ -0.22
PTPN20-223	ENST00000509900	COG3	Q96JB2	828 aa		13.68	□□□□□ -0.22
PTPN20-223	ENST00000509900	ANKRD31	Q8N7Z5	1873 aa		13.67	□□□□□ -0.22
PTPN20-223	ENST00000509900	TM4SF1	P30408	202 aa		13.67	□□□□□ -0.22
PTPN20-223	ENST00000509900	BOLA1	Q9Y3E2	137 aa		13.67	□□□□□ -0.22
PTPN20-223	ENST00000509900	TRPM7	Q96QT4	1865 aa		13.67	□□□□□ -0.22
PTPN20-223	ENST00000509900	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.66	□□□□□ -0.22
PTPN20-223	ENST00000509900	TERF2IP	Q9NYB0	399 aa		13.66	□□□□□ -0.22
PTPN20-223	ENST00000509900	TJP1	Q07157	1748 aa		13.65	□□□□□ -0.22
PTPN20-223	ENST00000509900	HSP90AB2P	Q58FF8	381 aa		13.65	□□□□□ -0.22
PTPN20-223	ENST00000509900	EFCAB3	Q8N7B9	438 aa		13.65	□□□□□ -0.22
PTPN20-223	ENST00000509900	BEGAIN	Q9BUH8	593 aa		13.65	□□□□□ -0.22
PTPN20-223	ENST00000509900	INSR	P06213	1382 aa		13.65	□□□□□ -0.22
PTPN20-223	ENST00000509900	NCAPD2	Q15021	1401 aa		13.64	□□□□□ -0.23
PTPN20-223	ENST00000509900	COL11A2	P13942	1736 aa	Predicted RBP	13.64	□□□□□ -0.23
PTPN20-223	ENST00000509900	IQCA1L	A6NCM1	817 aa		13.64	□□□□□ -0.23
PTPN20-223	ENST00000509900	CAPNS2	Q96L46	248 aa		13.64	□□□□□ -0.23
PTPN20-223	ENST00000509900	ABT1	Q9ULW3	272 aa	Known RBP	13.63	□□□□□ -0.23
PTPN20-223	ENST00000509900	SPG7	Q9UQ90	795 aa		13.63	□□□□□ -0.23
PTPN20-223	ENST00000509900	SLX4	Q8IY92	1834 aa		13.62	□□□□□ -0.23
PTPN20-223	ENST00000509900	DGKZ	Q13574	1117 aa		13.62	□□□□□ -0.23
PTPN20-223	ENST00000509900	EAPP	Q56P03	285 aa	Predicted RBP	13.62	□□□□□ -0.23
PTPN20-223	ENST00000509900	CARMIL3	Q8ND23	1372 aa		13.61	□□□□□ -0.23
PTPN20-223	ENST00000509900	RIOK3	O14730	519 aa	Known RBP	13.61	□□□□□ -0.23
PTPN20-223	ENST00000509900	PHKG2	P15735	406 aa		13.61	□□□□□ -0.23
PTPN20-223	ENST00000509900	CRKL	P46109	303 aa	Known RBP	13.61	□□□□□ -0.23
PTPN20-223	ENST00000509900	SOX10	P56693	466 aa		13.61	□□□□□ -0.23
PTPN20-223	ENST00000509900	C2CD5	Q86YS7	1000 aa		13.61	□□□□□ -0.23
PTPN20-223	ENST00000509900	CNTROB	Q8N137	903 aa		13.61	□□□□□ -0.23
PTPN20-223	ENST00000509900	GPR101	Q96P66	508 aa	Predicted RBP	13.61	□□□□□ -0.23
PTPN20-223	ENST00000509900	LTBP3	Q9NS15	1303 aa		13.61	□□□□□ -0.23
PTPN20-223	ENST00000509900	ARFGEF2	Q9Y6D5	1785 aa		13.6	□□□□□ -0.23
PTPN20-223	ENST00000509900	ROCK2	O75116	1388 aa	Known RBP	13.6	□□□□□ -0.23
PTPN20-223	ENST00000509900	MAP1S	Q66K74	1059 aa	Predicted RBP	13.6	□□□□□ -0.23
PTPN20-223	ENST00000509900	CYP4F22	Q6NT55	531 aa		13.6	□□□□□ -0.23
PTPN20-223	ENST00000509900	FLT4	P35916	1363 aa		13.59	□□□□□ -0.23
PTPN20-223	ENST00000509900	C21orf2	O43822	256 aa		13.59	□□□□□ -0.23
PTPN20-223	ENST00000509900	ECE1	P42892	770 aa		13.59	□□□□□ -0.23
PTPN20-223	ENST00000509900	EMP3	P54852	163 aa		13.59	□□□□□ -0.23
PTPN20-223	ENST00000509900	GRM1	Q13255	1194 aa		13.59	□□□□□ -0.23
PTPN20-223	ENST00000509900	NFIX	Q14938	502 aa		13.59	□□□□□ -0.23
PTPN20-223	ENST00000509900	RNF25	Q96BH1	459 aa	Predicted RBP	13.59	□□□□□ -0.23
PTPN20-223	ENST00000509900		H0YIN7	160 aa		13.58	□□□□□ -0.24
PTPN20-223	ENST00000509900	USPL1	Q5W0Q7	1092 aa		13.58	□□□□□ -0.24
PTPN20-223	ENST00000509900	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.58	□□□□□ -0.24
PTPN20-223	ENST00000509900	IFNL2	Q8IZJ0	200 aa		13.58	□□□□□ -0.24
PTPN20-223	ENST00000509900	TAOK3	Q9H2K8	898 aa		13.58	□□□□□ -0.24
PTPN20-223	ENST00000509900	TONSL	Q96HA7	1378 aa		13.58	□□□□□ -0.24
PTPN20-223	ENST00000509900	KIF20B	Q96Q89	1820 aa		13.57	□□□□□ -0.24
PTPN20-223	ENST00000509900	AOC2	O75106	756 aa		13.57	□□□□□ -0.24
PTPN20-223	ENST00000509900	FMR1	Q06787	632 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
PTPN20-223	ENST00000509900	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
PTPN20-223	ENST00000509900	ANKRD26	Q9UPS8	1709 aa		13.56	□□□□□ -0.24
PTPN20-223	ENST00000509900	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.56	□□□□□ -0.24
PTPN20-223	ENST00000509900	SERPINB2	P05120	415 aa		13.56	□□□□□ -0.24
PTPN20-223	ENST00000509900	EPHX2	P34913	555 aa		13.56	□□□□□ -0.24
PTPN20-223	ENST00000509900	INTS5	Q6P9B9	1019 aa	Known RBP	13.56	□□□□□ -0.24
PTPN20-223	ENST00000509900	ZFP91	Q96JP5	570 aa	Predicted RBP	13.56	□□□□□ -0.24
PTPN20-223	ENST00000509900	HACL1	Q9UJ83	578 aa		13.56	□□□□□ -0.24
PTPN20-223	ENST00000509900	KIF24	Q5T7B8	1368 aa		13.56	□□□□□ -0.24
PTPN20-223	ENST00000509900	CA12	O43570	354 aa		13.55	□□□□□ -0.24
PTPN20-223	ENST00000509900	ZPR1	O75312	459 aa		13.55	□□□□□ -0.24
PTPN20-223	ENST00000509900	MAP2K2	P36507	400 aa		13.55	□□□□□ -0.24
PTPN20-223	ENST00000509900	L3MBTL2	Q969R5	705 aa		13.55	□□□□□ -0.24
PTPN20-223	ENST00000509900	ZNF541	Q9H0D2	1346 aa		13.55	□□□□□ -0.24
PTPN20-223	ENST00000509900	ERVV-2	B6SEH9	535 aa		13.54	□□□□□ -0.24
PTPN20-223	ENST00000509900	PTCD1	O75127	700 aa	Known RBP	13.54	□□□□□ -0.24
PTPN20-223	ENST00000509900	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
PTPN20-223	ENST00000509900	GGNBP2	Q9H3C7	697 aa		13.54	□□□□□ -0.24
PTPN20-223	ENST00000509900	FYB1	O15117	783 aa		13.53	□□□□□ -0.24
PTPN20-223	ENST00000509900	PNMA8A	Q86V59	439 aa	Predicted RBP	13.53	□□□□□ -0.24
PTPN20-223	ENST00000509900	BCL2L12	Q9HB09	334 aa		13.53	□□□□□ -0.24
PTPN20-223	ENST00000509900	CST9	Q5W186	159 aa		13.52	□□□□□ -0.25
PTPN20-223	ENST00000509900	TLL2	Q9Y6L7	1015 aa		13.52	□□□□□ -0.25
PTPN20-223	ENST00000509900	SOS1	Q07889	1333 aa	Predicted RBP	13.52	□□□□□ -0.25
PTPN20-223	ENST00000509900	RNF123	Q5XPI4	1314 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms