RNA–Protein interactions for RNA: ENST00000509848.5

ARHGEF28-208, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-208ENST00000509848 NIP7Q9Y221 180 aaKnown RBP eCLIP26.19■■□□□ 1.78
ARHGEF28-208ENST00000509848 MYBBP1AQ9BQG0 1328 aaKnown RBP26.18■■□□□ 1.78
ARHGEF28-208ENST00000509848 BCORQ6W2J9 1755 aa26.18■■□□□ 1.78
ARHGEF28-208ENST00000509848 NFKBIEO00221 500 aa26.18■■□□□ 1.78
ARHGEF28-208ENST00000509848 CCDC146Q8IYE0 955 aa26.18■■□□□ 1.78
ARHGEF28-208ENST00000509848 PDZRN3Q9UPQ7 1066 aa26.18■■□□□ 1.78
ARHGEF28-208ENST00000509848 DLEC1Q9Y238 1755 aa26.18■■□□□ 1.78
ARHGEF28-208ENST00000509848 LMNB1P20700 586 aa26.17■■□□□ 1.78
ARHGEF28-208ENST00000509848 TOMM70O94826 608 aa26.16■■□□□ 1.78
ARHGEF28-208ENST00000509848 MYL6BP14649 208 aa26.16■■□□□ 1.78
ARHGEF28-208ENST00000509848 TMPOP42166 694 aaKnown RBP26.16■■□□□ 1.78
ARHGEF28-208ENST00000509848 RRAGCQ9HB90 399 aa26.16■■□□□ 1.78
ARHGEF28-208ENST00000509848 TSPYL4Q9UJ04 414 aa26.16■■□□□ 1.78
ARHGEF28-208ENST00000509848 KDM3BQ7LBC6 1761 aa26.15■■□□□ 1.78
ARHGEF28-208ENST00000509848 SRGNP10124 158 aa26.15■■□□□ 1.78
ARHGEF28-208ENST00000509848 TTLL7Q6ZT98 887 aa26.15■■□□□ 1.78
ARHGEF28-208ENST00000509848 KDM2BQ8NHM5 1336 aa26.14■■□□□ 1.78
ARHGEF28-208ENST00000509848 COL11A2P13942 1736 aaPredicted RBP26.14■■□□□ 1.78
ARHGEF28-208ENST00000509848 NEUROD2Q15784 382 aa26.14■■□□□ 1.78
ARHGEF28-208ENST00000509848 STYK1Q6J9G0 422 aa26.13■■□□□ 1.77
ARHGEF28-208ENST00000509848 TPTE2Q6XPS3 522 aa26.13■■□□□ 1.77
ARHGEF28-208ENST00000509848 CNKSR1Q969H4 720 aa26.13■■□□□ 1.77
ARHGEF28-208ENST00000509848 MASTLQ96GX5 879 aa26.13■■□□□ 1.77
ARHGEF28-208ENST00000509848 SBF1O95248 1867 aa26.13■■□□□ 1.77
ARHGEF28-208ENST00000509848 PRPF40BQ6NWY9 871 aaKnown RBP26.12■■□□□ 1.77
ARHGEF28-208ENST00000509848 C16orf71Q8IYS4 520 aaPredicted RBP26.11■■□□□ 1.77
ARHGEF28-208ENST00000509848 CEP350Q5VT06 3117 aa26.11■■□□□ 1.77
ARHGEF28-208ENST00000509848 LAMB4A4D0S4 1761 aa26.1■■□□□ 1.77
ARHGEF28-208ENST00000509848 RGL2O15211 777 aa26.1■■□□□ 1.77
ARHGEF28-208ENST00000509848 EIF2S2P20042 333 aaKnown RBP26.1■■□□□ 1.77
ARHGEF28-208ENST00000509848 ZBTB3Q9H5J0 574 aa26.1■■□□□ 1.77
ARHGEF28-208ENST00000509848 MAP3K15Q6ZN16 1313 aa26.1■■□□□ 1.77
ARHGEF28-208ENST00000509848 WDR43Q15061 677 aaKnown RBP eCLIP26.09■■□□□ 1.77
ARHGEF28-208ENST00000509848 KIF6Q6ZMV9 814 aa26.09■■□□□ 1.77
ARHGEF28-208ENST00000509848 ERVV-1B6SEH8 477 aa26.08■■□□□ 1.77
ARHGEF28-208ENST00000509848 GTF2E1P29083 439 aaPredicted RBP26.08■■□□□ 1.77
ARHGEF28-208ENST00000509848 LMOD3Q0VAK6 560 aa26.08■■□□□ 1.77
ARHGEF28-208ENST00000509848 ADAMTS8Q9UP79 889 aa26.08■■□□□ 1.77
ARHGEF28-208ENST00000509848 GPTP24298 496 aa26.07■■□□□ 1.76
ARHGEF28-208ENST00000509848 NUTM1Q86Y26 1132 aa26.07■■□□□ 1.76
ARHGEF28-208ENST00000509848 RUNDC1Q96C34 613 aa26.07■■□□□ 1.76
ARHGEF28-208ENST00000509848 KLRG2A4D1S0 409 aaPredicted RBP26.06■■□□□ 1.76
ARHGEF28-208ENST00000509848 GLTPD2A6NH11 291 aa26.06■■□□□ 1.76
ARHGEF28-208ENST00000509848 ANXA1P04083 346 aa26.06■■□□□ 1.76
ARHGEF28-208ENST00000509848 NPR1P16066 1061 aa26.06■■□□□ 1.76
ARHGEF28-208ENST00000509848 RBM46Q8TBY0 533 aaKnown RBP26.06■■□□□ 1.76
ARHGEF28-208ENST00000509848 NECTIN2Q92692 538 aa26.06■■□□□ 1.76
ARHGEF28-208ENST00000509848 SLX4Q8IY92 1834 aa26.06■■□□□ 1.76
ARHGEF28-208ENST00000509848 ZC3H4Q9UPT8 1303 aaKnown RBP26.06■■□□□ 1.76
ARHGEF28-208ENST00000509848 ERFEQ4G0M1 354 aa26.05■■□□□ 1.76
ARHGEF28-208ENST00000509848 TAOK3Q9H2K8 898 aa26.05■■□□□ 1.76
ARHGEF28-208ENST00000509848 PRKRIP1Q9H875 184 aaPredicted RBP26.05■■□□□ 1.76
ARHGEF28-208ENST00000509848 TRIM35Q9UPQ4 493 aa26.05■■□□□ 1.76
ARHGEF28-208ENST00000509848 LAS1LQ9Y4W2 734 aaKnown RBP26.05■■□□□ 1.76
ARHGEF28-208ENST00000509848 PDIA6Q15084 440 aa26.04■■□□□ 1.76
ARHGEF28-208ENST00000509848 PROSER3Q2NL68 480 aa26.04■■□□□ 1.76
ARHGEF28-208ENST00000509848 OLFM4Q6UX06 510 aa26.04■■□□□ 1.76
ARHGEF28-208ENST00000509848 C7orf43Q8WVR3 580 aa26.04■■□□□ 1.76
ARHGEF28-208ENST00000509848 KRT24Q2M2I5 525 aa26.03■■□□□ 1.76
ARHGEF28-208ENST00000509848 BABAM1Q9NWV8 329 aa26.03■■□□□ 1.76
ARHGEF28-208ENST00000509848 UBN2Q6ZU65 1347 aa26.03■■□□□ 1.76
ARHGEF28-208ENST00000509848 ABCC12Q96J65 1359 aa26.03■■□□□ 1.76
ARHGEF28-208ENST00000509848 SUSD4Q5VX71 490 aa26.02■■□□□ 1.76
ARHGEF28-208ENST00000509848 LRP10Q7Z4F1 713 aa26.02■■□□□ 1.76
ARHGEF28-208ENST00000509848 NYXQ9GZU5 481 aa26.02■■□□□ 1.76
ARHGEF28-208ENST00000509848 ERBB4Q15303 1308 aa26.02■■□□□ 1.76
ARHGEF28-208ENST00000509848 APLP1P51693 650 aa26.01■■□□□ 1.75
ARHGEF28-208ENST00000509848 LTBP3Q9NS15 1303 aa26.01■■□□□ 1.75
ARHGEF28-208ENST00000509848 VEGFAP15692 232 aaPredicted RBP26■■□□□ 1.75
ARHGEF28-208ENST00000509848 SOGA3Q5TF21 947 aa26■■□□□ 1.75
ARHGEF28-208ENST00000509848 ZNF34Q8IZ26 560 aa26■■□□□ 1.75
ARHGEF28-208ENST00000509848 CHL1O00533 1208 aa25.99■■□□□ 1.75
ARHGEF28-208ENST00000509848 CCDC93Q567U6 631 aa25.99■■□□□ 1.75
ARHGEF28-208ENST00000509848 DPY19L2Q6NUT2 758 aa25.99■■□□□ 1.75
ARHGEF28-208ENST00000509848 GIGYF2Q6Y7W6 1299 aaKnown RBP25.99■■□□□ 1.75
ARHGEF28-208ENST00000509848 CACNA1SQ13698 1873 aa25.99■■□□□ 1.75
ARHGEF28-208ENST00000509848 CCDC88AQ3V6T2 1871 aa25.99■■□□□ 1.75
ARHGEF28-208ENST00000509848 FER1L6Q2WGJ9 1857 aa25.98■■□□□ 1.75
ARHGEF28-208ENST00000509848 TIAM2Q8IVF5 1701 aa25.98■■□□□ 1.75
ARHGEF28-208ENST00000509848 HTRA3P83110 453 aa25.98■■□□□ 1.75
ARHGEF28-208ENST00000509848 FSTL1Q12841 308 aa25.98■■□□□ 1.75
ARHGEF28-208ENST00000509848 TNRC6CQ9HCJ0 1690 aaKnown RBP25.97■■□□□ 1.75
ARHGEF28-208ENST00000509848 POTECB2RU33 542 aa25.97■■□□□ 1.75
ARHGEF28-208ENST00000509848 AIMP1Q12904 312 aaKnown RBP25.97■■□□□ 1.75
ARHGEF28-208ENST00000509848 ALDH1B1P30837 517 aa25.96■■□□□ 1.75
ARHGEF28-208ENST00000509848 COPS6Q7L5N1 327 aa25.96■■□□□ 1.75
ARHGEF28-208ENST00000509848 NUP98P52948 1817 aa25.95■■□□□ 1.75
ARHGEF28-208ENST00000509848 DDNO94850 711 aaPredicted RBP25.95■■□□□ 1.74
ARHGEF28-208ENST00000509848 NTSR2O95665 410 aa25.95■■□□□ 1.74
ARHGEF28-208ENST00000509848 CRY2Q49AN0 593 aa25.95■■□□□ 1.74
ARHGEF28-208ENST00000509848 XAGE3Q8WTP9 111 aa25.95■■□□□ 1.74
ARHGEF28-208ENST00000509848 ZNF277Q9NRM2 450 aaPredicted RBP25.95■■□□□ 1.74
ARHGEF28-208ENST00000509848 FKBP4Q02790 459 aaKnown RBP eCLIP25.94■■□□□ 1.74
ARHGEF28-208ENST00000509848 C3orf67Q6ZVT6 689 aa25.94■■□□□ 1.74
ARHGEF28-208ENST00000509848 SMC1BQ8NDV3 1235 aa25.94■■□□□ 1.74
ARHGEF28-208ENST00000509848 ARFGEF2Q9Y6D5 1785 aa25.94■■□□□ 1.74
ARHGEF28-208ENST00000509848 DNAJC5GQ8N7S2 189 aa25.93■■□□□ 1.74
ARHGEF28-208ENST00000509848 RPGRQ92834 1020 aaKnown RBP25.93■■□□□ 1.74
ARHGEF28-208ENST00000509848 APAF1O14727 1248 aa25.92■■□□□ 1.74
ARHGEF28-208ENST00000509848 PPP1R42Q7Z4L9 355 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms