RNA–Protein interactions for RNA: ENST00000509511.5

FGFR4-211, Transcript of fibroblast growth factor receptor 4, humanhuman

TSL 1 (best)

Gene FGFR4, Length 1,341 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-211ENST00000509511 C8orf58Q8NAV2 365 aa25.42■■□□□ 1.66
FGFR4-211ENST00000509511 NLGN2Q8NFZ4 835 aa25.42■■□□□ 1.66
FGFR4-211ENST00000509511 DBF4Q9UBU7 674 aaPredicted RBP25.42■■□□□ 1.66
FGFR4-211ENST00000509511 MAP3K15Q6ZN16 1313 aa25.42■■□□□ 1.66
FGFR4-211ENST00000509511 ELL2O00472 640 aaPredicted RBP25.41■■□□□ 1.66
FGFR4-211ENST00000509511 ANXA1P04083 346 aa25.41■■□□□ 1.66
FGFR4-211ENST00000509511 AFDNP55196 1824 aaKnown RBP25.41■■□□□ 1.66
FGFR4-211ENST00000509511 DCAF8L1A6NGE4 600 aa25.4■■□□□ 1.66
FGFR4-211ENST00000509511 ERVV-1B6SEH8 477 aa25.4■■□□□ 1.66
FGFR4-211ENST00000509511 TTLL7Q6ZT98 887 aa25.4■■□□□ 1.66
FGFR4-211ENST00000509511 LRP10Q7Z4F1 713 aa25.4■■□□□ 1.66
FGFR4-211ENST00000509511 SETDB2Q96T68 719 aa25.4■■□□□ 1.66
FGFR4-211ENST00000509511 ATP10DQ9P241 1426 aa25.4■■□□□ 1.66
FGFR4-211ENST00000509511 GOLGA2Q08379 1002 aa25.39■■□□□ 1.66
FGFR4-211ENST00000509511 PXDNLA1KZ92 1463 aa25.39■■□□□ 1.65
FGFR4-211ENST00000509511 ZBTB3Q9H5J0 574 aa25.38■■□□□ 1.65
FGFR4-211ENST00000509511 KIAA1551Q9HCM1 1747 aa25.38■■□□□ 1.65
FGFR4-211ENST00000509511 SERPINB2P05120 415 aa25.37■■□□□ 1.65
FGFR4-211ENST00000509511 TWISTNBQ3B726 338 aaPredicted RBP25.37■■□□□ 1.65
FGFR4-211ENST00000509511 TSPYL6Q8N831 410 aa25.37■■□□□ 1.65
FGFR4-211ENST00000509511 NPHP1O15259 732 aa25.37■■□□□ 1.65
FGFR4-211ENST00000509511 CCDC30Q5VVM6 783 aa25.37■■□□□ 1.65
FGFR4-211ENST00000509511 XAGE3Q8WTP9 111 aa25.37■■□□□ 1.65
FGFR4-211ENST00000509511 HYPKQ9NX55 129 aa25.37■■□□□ 1.65
FGFR4-211ENST00000509511 NUP98P52948 1817 aa25.36■■□□□ 1.65
FGFR4-211ENST00000509511 HLFQ16534 295 aa25.36■■□□□ 1.65
FGFR4-211ENST00000509511 COPS6Q7L5N1 327 aa25.36■■□□□ 1.65
FGFR4-211ENST00000509511 SPINK5Q9NQ38 1064 aaPredicted RBP25.36■■□□□ 1.65
FGFR4-211ENST00000509511 NIP7Q9Y221 180 aaKnown RBP eCLIP25.36■■□□□ 1.65
FGFR4-211ENST00000509511 GOLGB1Q14789 3259 aaKnown RBP25.35■■□□□ 1.65
FGFR4-211ENST00000509511 CNBD1Q8NA66 436 aa25.35■■□□□ 1.65
FGFR4-211ENST00000509511 ANKRD36CQ5JPF3 1778 aa25.34■■□□□ 1.65
FGFR4-211ENST00000509511 TGFB2P61812 414 aa25.34■■□□□ 1.65
FGFR4-211ENST00000509511 AIMP1Q12904 312 aaKnown RBP25.34■■□□□ 1.65
FGFR4-211ENST00000509511 STK31Q9BXU1 1019 aa25.34■■□□□ 1.65
FGFR4-211ENST00000509511 E9PSI1 815 aa25.33■■□□□ 1.64
FGFR4-211ENST00000509511 NBPF5PQ86XG9 351 aaPredicted RBP25.33■■□□□ 1.64
FGFR4-211ENST00000509511 N4BP2Q86UW6 1770 aaPredicted RBP25.32■■□□□ 1.64
FGFR4-211ENST00000509511 ST5P78524 1137 aa25.32■■□□□ 1.64
FGFR4-211ENST00000509511 EXOSC9Q06265 439 aaKnown RBP25.32■■□□□ 1.64
FGFR4-211ENST00000509511 GIGYF2Q6Y7W6 1299 aaKnown RBP25.32■■□□□ 1.64
FGFR4-211ENST00000509511 PELP1Q8IZL8 1130 aaKnown RBP25.32■■□□□ 1.64
FGFR4-211ENST00000509511 IBTKQ9P2D0 1353 aaPredicted RBP25.31■■□□□ 1.64
FGFR4-211ENST00000509511 HSP90AB3PQ58FF7 597 aa25.31■■□□□ 1.64
FGFR4-211ENST00000509511 PRR5LQ6MZQ0 368 aa25.31■■□□□ 1.64
FGFR4-211ENST00000509511 ARFGEF2Q9Y6D5 1785 aa25.3■■□□□ 1.64
FGFR4-211ENST00000509511 GPR162Q16538 588 aa25.3■■□□□ 1.64
FGFR4-211ENST00000509511 PLBD2Q8NHP8 589 aa25.29■■□□□ 1.64
FGFR4-211ENST00000509511 GPTP24298 496 aa25.28■■□□□ 1.64
FGFR4-211ENST00000509511 NYXQ9GZU5 481 aa25.28■■□□□ 1.64
FGFR4-211ENST00000509511 DLEC1Q9Y238 1755 aa25.28■■□□□ 1.64
FGFR4-211ENST00000509511 ANKRD31Q8N7Z5 1873 aa25.28■■□□□ 1.64
FGFR4-211ENST00000509511 BRCA1P38398 1863 aaKnown RBP25.27■■□□□ 1.64
FGFR4-211ENST00000509511 UBN2Q6ZU65 1347 aa25.27■■□□□ 1.64
FGFR4-211ENST00000509511 DPEP1P16444 411 aa25.27■■□□□ 1.64
FGFR4-211ENST00000509511 TPTE2Q6XPS3 522 aa25.27■■□□□ 1.64
FGFR4-211ENST00000509511 ANKRD13DQ6ZTN6 518 aa25.27■■□□□ 1.64
FGFR4-211ENST00000509511 A0A0G2JLW4 131 aa25.26■■□□□ 1.63
FGFR4-211ENST00000509511 PARP10Q53GL7 1025 aa25.26■■□□□ 1.63
FGFR4-211ENST00000509511 ZNF34Q8IZ26 560 aa25.26■■□□□ 1.63
FGFR4-211ENST00000509511 COL11A2P13942 1736 aaPredicted RBP25.26■■□□□ 1.63
FGFR4-211ENST00000509511 FAM177BA6PVY3 158 aa25.25■■□□□ 1.63
FGFR4-211ENST00000509511 DDX58O95786 925 aaKnown RBP25.25■■□□□ 1.63
FGFR4-211ENST00000509511 HNRNPUQ00839 825 aaKnown RBP eCLIP25.25■■□□□ 1.63
FGFR4-211ENST00000509511 BRIP1Q9BX63 1249 aa25.25■■□□□ 1.63
FGFR4-211ENST00000509511 PHAXQ9H814 394 aaKnown RBP25.25■■□□□ 1.63
FGFR4-211ENST00000509511 UTRNP46939 3433 aa25.24■■□□□ 1.63
FGFR4-211ENST00000509511 VAMP4O75379 141 aa25.24■■□□□ 1.63
FGFR4-211ENST00000509511 GTF2E1P29083 439 aaPredicted RBP25.24■■□□□ 1.63
FGFR4-211ENST00000509511 PDE6BP35913 854 aa25.24■■□□□ 1.63
FGFR4-211ENST00000509511 SLFN5Q08AF3 891 aa25.24■■□□□ 1.63
FGFR4-211ENST00000509511 WWC3Q9ULE0 1092 aa25.24■■□□□ 1.63
FGFR4-211ENST00000509511 PDZRN3Q9UPQ7 1066 aa25.24■■□□□ 1.63
FGFR4-211ENST00000509511 TCERG1O14776 1098 aaKnown RBP25.23■■□□□ 1.63
FGFR4-211ENST00000509511 YBX3P16989 372 aaKnown RBP eCLIP25.23■■□□□ 1.636e-6■□□□□ 10.9
FGFR4-211ENST00000509511 CHRNA5P30532 468 aa25.23■■□□□ 1.63
FGFR4-211ENST00000509511 CCDC24Q8N4L8 307 aa25.23■■□□□ 1.63
FGFR4-211ENST00000509511 TCIRG1Q13488 830 aa25.22■■□□□ 1.63
FGFR4-211ENST00000509511 PPP1R42Q7Z4L9 355 aa25.22■■□□□ 1.63
FGFR4-211ENST00000509511 RIC3Q7Z5B4 369 aa25.22■■□□□ 1.63
FGFR4-211ENST00000509511 C2CD5Q86YS7 1000 aa25.22■■□□□ 1.63
FGFR4-211ENST00000509511 RIC1Q4ADV7 1423 aa25.22■■□□□ 1.63
FGFR4-211ENST00000509511 ABCC12Q96J65 1359 aa25.22■■□□□ 1.63
FGFR4-211ENST00000509511 RNF123Q5XPI4 1314 aa25.21■■□□□ 1.63
FGFR4-211ENST00000509511 TNRC6CQ9HCJ0 1690 aaKnown RBP25.21■■□□□ 1.63
FGFR4-211ENST00000509511 H0YIN7 160 aa25.21■■□□□ 1.63
FGFR4-211ENST00000509511 SLC4A2P04920 1241 aa25.21■■□□□ 1.63
FGFR4-211ENST00000509511 CDCA7LQ96GN5 454 aa25.21■■□□□ 1.63
FGFR4-211ENST00000509511 PIM2Q9P1W9 311 aa25.21■■□□□ 1.63
FGFR4-211ENST00000509511 CACNA1FO60840 1977 aa25.21■■□□□ 1.63
FGFR4-211ENST00000509511 GRIN3BO60391 1043 aa25.2■■□□□ 1.62
FGFR4-211ENST00000509511 NTSR2O95665 410 aa25.2■■□□□ 1.62
FGFR4-211ENST00000509511 KCNA3P22001 575 aa25.19■■□□□ 1.62
FGFR4-211ENST00000509511 SUSD4Q5VX71 490 aa25.19■■□□□ 1.62
FGFR4-211ENST00000509511 NLRP10Q86W26 655 aa25.19■■□□□ 1.62
FGFR4-211ENST00000509511 UTP14AQ9BVJ6 771 aaKnown RBP25.19■■□□□ 1.62
FGFR4-211ENST00000509511 BCS1LQ9Y276 419 aa25.19■■□□□ 1.62
FGFR4-211ENST00000509511 DALRD3Q5D0E6 543 aaKnown RBP25.18■■□□□ 1.62
FGFR4-211ENST00000509511 NUTM1Q86Y26 1132 aa25.18■■□□□ 1.62
FGFR4-211ENST00000509511 FLIIQ13045 1269 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms