RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 MAP1SQ66K74 1059 aaPredicted RBP5.45□□□□□ -1.54
RNF4-211ENST00000509206 FBXO22Q8NEZ5 403 aa5.45□□□□□ -1.54
RNF4-211ENST00000509206 KCNV2Q8TDN2 545 aa5.45□□□□□ -1.54
RNF4-211ENST00000509206 TAOK3Q9H2K8 898 aa5.45□□□□□ -1.54
RNF4-211ENST00000509206 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.45□□□□□ -1.54
RNF4-211ENST00000509206 HACL1Q9UJ83 578 aa5.45□□□□□ -1.54
RNF4-211ENST00000509206 SMG6Q86US8 1419 aaKnown RBP5.45□□□□□ -1.54
RNF4-211ENST00000509206 MEGF6O75095 1541 aa5.44□□□□□ -1.54
RNF4-211ENST00000509206 NFKBIEO00221 500 aa5.44□□□□□ -1.54
RNF4-211ENST00000509206 NPHP1O15259 732 aa5.44□□□□□ -1.54
RNF4-211ENST00000509206 AOC2O75106 756 aa5.44□□□□□ -1.54
RNF4-211ENST00000509206 EPHX2P34913 555 aa5.44□□□□□ -1.54
RNF4-211ENST00000509206 DDR1Q08345 913 aa5.44□□□□□ -1.54
RNF4-211ENST00000509206 BICDL1Q6ZP65 573 aa5.44□□□□□ -1.54
RNF4-211ENST00000509206 OCEL1Q9H607 264 aa5.44□□□□□ -1.54
RNF4-211ENST00000509206 DDX21Q9NR30 783 aaKnown RBP eCLIP5.44□□□□□ -1.54
RNF4-211ENST00000509206 ATG3Q9NT62 314 aa5.44□□□□□ -1.54
RNF4-211ENST00000509206 SRP68Q9UHB9 627 aaKnown RBP5.44□□□□□ -1.54
RNF4-211ENST00000509206 CD163L1Q9NR16 1453 aa5.44□□□□□ -1.54
RNF4-211ENST00000509206 MAP3K19Q56UN5 1328 aa5.44□□□□□ -1.54
RNF4-211ENST00000509206 KDM6AO15550 1401 aaPredicted RBP5.43□□□□□ -1.54
RNF4-211ENST00000509206 POLRMTO00411 1230 aaKnown RBP5.43□□□□□ -1.54
RNF4-211ENST00000509206 FBLN1P23142 703 aa5.43□□□□□ -1.54
RNF4-211ENST00000509206 HABP4Q5JVS0 413 aaKnown RBP5.43□□□□□ -1.54
RNF4-211ENST00000509206 IFNL2Q8IZJ0 200 aa5.43□□□□□ -1.54
RNF4-211ENST00000509206 COLQQ9Y215 455 aaPredicted RBP5.43□□□□□ -1.54
RNF4-211ENST00000509206 ARFGEF1Q9Y6D6 1849 aa5.43□□□□□ -1.54
RNF4-211ENST00000509206 UBR3Q6ZT12 1888 aa5.43□□□□□ -1.54
RNF4-211ENST00000509206 C4AP0C0L4 1744 aa5.43□□□□□ -1.54
RNF4-211ENST00000509206 TAF1LQ8IZX4 1826 aa5.42□□□□□ -1.54
RNF4-211ENST00000509206 KIF13BQ9NQT8 1826 aa5.42□□□□□ -1.54
RNF4-211ENST00000509206 G3V3G9 751 aa5.42□□□□□ -1.54
RNF4-211ENST00000509206 SERPINB2P05120 415 aa5.42□□□□□ -1.54
RNF4-211ENST00000509206 LMOD1P29536 600 aaPredicted RBP5.42□□□□□ -1.54
RNF4-211ENST00000509206 TM4SF1P30408 202 aa5.42□□□□□ -1.54
RNF4-211ENST00000509206 PDE6BP35913 854 aa5.42□□□□□ -1.54
RNF4-211ENST00000509206 IRX5P78411 483 aaPredicted RBP5.42□□□□□ -1.54
RNF4-211ENST00000509206 RRS1Q15050 365 aaKnown RBP5.42□□□□□ -1.54
RNF4-211ENST00000509206 SOGA3Q5TF21 947 aa5.42□□□□□ -1.54
RNF4-211ENST00000509206 USPL1Q5W0Q7 1092 aa5.42□□□□□ -1.54
RNF4-211ENST00000509206 SLC17A8Q8NDX2 589 aa5.42□□□□□ -1.54
RNF4-211ENST00000509206 L3MBTL3Q96JM7 780 aaPredicted RBP5.42□□□□□ -1.54
RNF4-211ENST00000509206 SLC12A5Q9H2X9 1139 aa5.42□□□□□ -1.54
RNF4-211ENST00000509206 PDZRN3Q9UPQ7 1066 aa5.42□□□□□ -1.54
RNF4-211ENST00000509206 SBF1O95248 1867 aa5.42□□□□□ -1.54
RNF4-211ENST00000509206 CNTNAP4Q9C0A0 1308 aa5.42□□□□□ -1.54
RNF4-211ENST00000509206 USP42Q9H9J4 1324 aaKnown RBP5.42□□□□□ -1.54
RNF4-211ENST00000509206 PTCD1O75127 700 aaKnown RBP5.41□□□□□ -1.54
RNF4-211ENST00000509206 CRKLP46109 303 aaKnown RBP5.41□□□□□ -1.54
RNF4-211ENST00000509206 BRPF1P55201 1214 aaPredicted RBP5.41□□□□□ -1.54
RNF4-211ENST00000509206 CABP4P57796 275 aa5.41□□□□□ -1.54
RNF4-211ENST00000509206 CIAPIN1Q6FI81 312 aa5.41□□□□□ -1.54
RNF4-211ENST00000509206 MAMSTRQ6ZN01 415 aa5.41□□□□□ -1.54
RNF4-211ENST00000509206 CNKSR1Q969H4 720 aa5.41□□□□□ -1.54
RNF4-211ENST00000509206 LTN1O94822 1766 aa5.41□□□□□ -1.54
RNF4-211ENST00000509206 SBNO2Q9Y2G9 1366 aa5.41□□□□□ -1.54
RNF4-211ENST00000509206 KIAA1551Q9HCM1 1747 aa5.4□□□□□ -1.54
RNF4-211ENST00000509206 PPM1GO15355 546 aaPredicted RBP5.4□□□□□ -1.54
RNF4-211ENST00000509206 HSP90AB1P08238 724 aaKnown RBP5.4□□□□□ -1.54
RNF4-211ENST00000509206 NFIXQ14938 502 aa5.4□□□□□ -1.54
RNF4-211ENST00000509206 E2F4Q16254 413 aa5.4□□□□□ -1.54
RNF4-211ENST00000509206 HSP90AB2PQ58FF8 381 aa5.4□□□□□ -1.54
RNF4-211ENST00000509206 AKAP4Q5JQC9 854 aa5.4□□□□□ -1.54
RNF4-211ENST00000509206 SCUBE2Q9NQ36 999 aa5.4□□□□□ -1.54
RNF4-211ENST00000509206 GJA3Q9Y6H8 435 aa5.4□□□□□ -1.54
RNF4-211ENST00000509206 TLL2Q9Y6L7 1015 aa5.4□□□□□ -1.54
RNF4-211ENST00000509206 RNF123Q5XPI4 1314 aa5.4□□□□□ -1.55
RNF4-211ENST00000509206 TOGARAM1Q9Y4F4 1720 aa5.4□□□□□ -1.55
RNF4-211ENST00000509206 EDC4Q6P2E9 1401 aaKnown RBP5.4□□□□□ -1.55
RNF4-211ENST00000509206 VIRMAQ69YN4 1812 aaKnown RBP5.39□□□□□ -1.55
RNF4-211ENST00000509206 CASP8AP2Q9UKL3 1982 aa5.39□□□□□ -1.55
RNF4-211ENST00000509206 POTEFA5A3E0 1075 aa5.39□□□□□ -1.55
RNF4-211ENST00000509206 ERVV-2B6SEH9 535 aa5.39□□□□□ -1.55
RNF4-211ENST00000509206 CELF2O95319 508 aaKnown RBP5.39□□□□□ -1.55
RNF4-211ENST00000509206 PHKG2P15735 406 aa5.39□□□□□ -1.55
RNF4-211ENST00000509206 EIF6P56537 245 aaKnown RBP5.39□□□□□ -1.55
RNF4-211ENST00000509206 NOGQ13253 232 aa5.39□□□□□ -1.55
RNF4-211ENST00000509206 CTU1Q7Z7A3 348 aaKnown RBP5.39□□□□□ -1.55
RNF4-211ENST00000509206 NPM2Q86SE8 214 aaKnown RBP5.39□□□□□ -1.55
RNF4-211ENST00000509206 JDP2Q8WYK2 163 aa5.39□□□□□ -1.55
RNF4-211ENST00000509206 MS4A4AQ96JQ5 239 aa5.39□□□□□ -1.55
RNF4-211ENST00000509206 SLC4A9Q96Q91 983 aa5.39□□□□□ -1.55
RNF4-211ENST00000509206 ZNF408Q9H9D4 720 aa5.39□□□□□ -1.55
RNF4-211ENST00000509206 HDAC9Q9UKV0 1011 aa5.39□□□□□ -1.55
RNF4-211ENST00000509206 FAM208AQ9UK61 1670 aaKnown RBP5.39□□□□□ -1.55
RNF4-211ENST00000509206 LTBP3Q9NS15 1303 aa5.39□□□□□ -1.55
RNF4-211ENST00000509206 RTL1A6NKG5 1358 aa5.39□□□□□ -1.55
RNF4-211ENST00000509206 BRCA1P38398 1863 aaKnown RBP5.39□□□□□ -1.55
RNF4-211ENST00000509206 POTEB2H3BUK9 544 aa5.38□□□□□ -1.55
RNF4-211ENST00000509206 TULP1O00294 542 aaPredicted RBP5.38□□□□□ -1.55
RNF4-211ENST00000509206 FMR1Q06787 632 aaKnown RBP eCLIP5.38□□□□□ -1.55
RNF4-211ENST00000509206 CCDC93Q567U6 631 aa5.38□□□□□ -1.55
RNF4-211ENST00000509206 GPC2Q8N158 579 aa5.38□□□□□ -1.55
RNF4-211ENST00000509206 BRIP1Q9BX63 1249 aa5.38□□□□□ -1.55
RNF4-211ENST00000509206 ZNF277Q9NRM2 450 aaPredicted RBP5.38□□□□□ -1.55
RNF4-211ENST00000509206 NARFQ9UHQ1 456 aa5.38□□□□□ -1.55
RNF4-211ENST00000509206 TNRC18O15417 2968 aaPredicted RBP5.38□□□□□ -1.55
RNF4-211ENST00000509206 TRAF5O00463 557 aa5.37□□□□□ -1.55
RNF4-211ENST00000509206 TRPA1O75762 1119 aa5.37□□□□□ -1.55
RNF4-211ENST00000509206 PDE4AP27815 886 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms