RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 C2CD5Q86YS7 1000 aa19.46■□□□□ 0.71
UBE2D3-228ENST00000508974 RUNDC1Q96C34 613 aa19.46■□□□□ 0.71
UBE2D3-228ENST00000508974 MYL6BP14649 208 aa19.45■□□□□ 0.7
UBE2D3-228ENST00000508974 PRR5LQ6MZQ0 368 aa19.45■□□□□ 0.7
UBE2D3-228ENST00000508974 NUP98P52948 1817 aa19.44■□□□□ 0.7
UBE2D3-228ENST00000508974 CNBD1Q8NA66 436 aa19.44■□□□□ 0.7
UBE2D3-228ENST00000508974 LAS1LQ9Y4W2 734 aaKnown RBP19.44■□□□□ 0.7
UBE2D3-228ENST00000508974 FAM177BA6PVY3 158 aa19.43■□□□□ 0.7
UBE2D3-228ENST00000508974 H0YIN7 160 aa19.43■□□□□ 0.7
UBE2D3-228ENST00000508974 GPBP1L1Q9HC44 474 aaPredicted RBP19.43■□□□□ 0.7
UBE2D3-228ENST00000508974 ZNF652Q9Y2D9 606 aa19.43■□□□□ 0.7
UBE2D3-228ENST00000508974 SBF1O95248 1867 aa19.42■□□□□ 0.7
UBE2D3-228ENST00000508974 HLFQ16534 295 aa19.42■□□□□ 0.7
UBE2D3-228ENST00000508974 RNF39Q9H2S5 420 aa19.42■□□□□ 0.7
UBE2D3-228ENST00000508974 EIF2S2P20042 333 aaKnown RBP19.41■□□□□ 0.7
UBE2D3-228ENST00000508974 NBPF5PQ86XG9 351 aaPredicted RBP19.41■□□□□ 0.7
UBE2D3-228ENST00000508974 ZNF622Q969S3 477 aaKnown RBP eCLIP19.41■□□□□ 0.7
UBE2D3-228ENST00000508974 ZNF219Q9P2Y4 722 aaPredicted RBP19.41■□□□□ 0.7
UBE2D3-228ENST00000508974 TRIM35Q9UPQ4 493 aa19.41■□□□□ 0.7
UBE2D3-228ENST00000508974 NIP7Q9Y221 180 aaKnown RBP eCLIP19.41■□□□□ 0.7
UBE2D3-228ENST00000508974 CCDC88AQ3V6T2 1871 aa19.4■□□□□ 0.7
UBE2D3-228ENST00000508974 PDE6BP35913 854 aa19.4■□□□□ 0.7
UBE2D3-228ENST00000508974 ST5P78524 1137 aa19.4■□□□□ 0.7
UBE2D3-228ENST00000508974 CLEC4GQ6UXB4 293 aa19.4■□□□□ 0.7
UBE2D3-228ENST00000508974 TTLL7Q6ZT98 887 aa19.4■□□□□ 0.7
UBE2D3-228ENST00000508974 TTLL6Q8N841 843 aa19.4■□□□□ 0.7
UBE2D3-228ENST00000508974 NECTIN2Q92692 538 aa19.4■□□□□ 0.7
UBE2D3-228ENST00000508974 BRIP1Q9BX63 1249 aa19.4■□□□□ 0.7
UBE2D3-228ENST00000508974 ZNF316A6NFI3 1004 aaPredicted RBP19.39■□□□□ 0.69
UBE2D3-228ENST00000508974 C1QTNF8P60827 252 aa19.39■□□□□ 0.69
UBE2D3-228ENST00000508974 RASSF7Q02833 373 aa19.39■□□□□ 0.69
UBE2D3-228ENST00000508974 CCDC184Q52MB2 194 aa19.39■□□□□ 0.69
UBE2D3-228ENST00000508974 C9orf131Q5VYM1 1079 aa19.39■□□□□ 0.69
UBE2D3-228ENST00000508974 KIF6Q6ZMV9 814 aa19.39■□□□□ 0.69
UBE2D3-228ENST00000508974 ZBTB3Q9H5J0 574 aa19.39■□□□□ 0.69
UBE2D3-228ENST00000508974 SENP3-EIF4A1A0A087X0R7 540 aa19.38■□□□□ 0.69
UBE2D3-228ENST00000508974 ANXA1P04083 346 aa19.38■□□□□ 0.69
UBE2D3-228ENST00000508974 KRT24Q2M2I5 525 aa19.38■□□□□ 0.69
UBE2D3-228ENST00000508974 RNF181Q9P0P0 153 aa19.37■□□□□ 0.69
UBE2D3-228ENST00000508974 SLX4Q8IY92 1834 aa19.37■□□□□ 0.69
UBE2D3-228ENST00000508974 ARFGEF2Q9Y6D5 1785 aa19.37■□□□□ 0.69
UBE2D3-228ENST00000508974 MAP3K15Q6ZN16 1313 aa19.36■□□□□ 0.69
UBE2D3-228ENST00000508974 APAF1O14727 1248 aa19.36■□□□□ 0.69
UBE2D3-228ENST00000508974 TNRC6CQ9HCJ0 1690 aaKnown RBP19.36■□□□□ 0.69
UBE2D3-228ENST00000508974 TIAM2Q8IVF5 1701 aa19.35■□□□□ 0.69
UBE2D3-228ENST00000508974 GPTP24298 496 aa19.35■□□□□ 0.69
UBE2D3-228ENST00000508974 PROSER3Q2NL68 480 aa19.35■□□□□ 0.69
UBE2D3-228ENST00000508974 BABAM1Q9NWV8 329 aa19.35■□□□□ 0.69
UBE2D3-228ENST00000508974 CHL1O00533 1208 aa19.34■□□□□ 0.69
UBE2D3-228ENST00000508974 C21orf2O43822 256 aa19.34■□□□□ 0.69
UBE2D3-228ENST00000508974 GTF2E1P29083 439 aaPredicted RBP19.34■□□□□ 0.69
UBE2D3-228ENST00000508974 TPTE2Q6XPS3 522 aa19.34■□□□□ 0.69
UBE2D3-228ENST00000508974 ERBB4Q15303 1308 aa19.33■□□□□ 0.69
UBE2D3-228ENST00000508974 FER1L6Q2WGJ9 1857 aa19.33■□□□□ 0.68
UBE2D3-228ENST00000508974 ANKRD36CQ5JPF3 1778 aa19.32■□□□□ 0.68
UBE2D3-228ENST00000508974 ERVV-1B6SEH8 477 aa19.32■□□□□ 0.68
UBE2D3-228ENST00000508974 SRGNP10124 158 aa19.32■□□□□ 0.68
UBE2D3-228ENST00000508974 PDIA6Q15084 440 aa19.32■□□□□ 0.68
UBE2D3-228ENST00000508974 NUTM1Q86Y26 1132 aa19.32■□□□□ 0.68
UBE2D3-228ENST00000508974 PDZRN3Q9UPQ7 1066 aa19.32■□□□□ 0.68
UBE2D3-228ENST00000508974 RGL2O15211 777 aa19.31■□□□□ 0.68
UBE2D3-228ENST00000508974 PRELPP51888 382 aa19.31■□□□□ 0.68
UBE2D3-228ENST00000508974 AIMP1Q12904 312 aaKnown RBP19.31■□□□□ 0.68
UBE2D3-228ENST00000508974 PRPF40BQ6NWY9 871 aaKnown RBP19.31■□□□□ 0.68
UBE2D3-228ENST00000508974 MASTLQ96GX5 879 aa19.31■□□□□ 0.68
UBE2D3-228ENST00000508974 ABCC12Q96J65 1359 aa19.31■□□□□ 0.68
UBE2D3-228ENST00000508974 UBN2Q6ZU65 1347 aa19.3■□□□□ 0.68
UBE2D3-228ENST00000508974 NFKBIEO00221 500 aa19.3■□□□□ 0.68
UBE2D3-228ENST00000508974 ANP32CO43423 234 aa19.3■□□□□ 0.68
UBE2D3-228ENST00000508974 STYK1Q6J9G0 422 aa19.3■□□□□ 0.68
UBE2D3-228ENST00000508974 LRP10Q7Z4F1 713 aa19.3■□□□□ 0.68
UBE2D3-228ENST00000508974 NMRK2Q9NPI5 230 aa19.3■□□□□ 0.68
UBE2D3-228ENST00000508974 CACNB1Q02641 598 aaPredicted RBP19.29■□□□□ 0.68
UBE2D3-228ENST00000508974 ERFEQ4G0M1 354 aa19.29■□□□□ 0.68
UBE2D3-228ENST00000508974 CNKSR1Q969H4 720 aa19.29■□□□□ 0.68
UBE2D3-228ENST00000508974 CFAP44Q96MT7 982 aa19.29■□□□□ 0.68
UBE2D3-228ENST00000508974 MBIPQ9NS73 344 aa19.29■□□□□ 0.68
UBE2D3-228ENST00000508974 CHPF2Q9P2E5 772 aa19.29■□□□□ 0.68
UBE2D3-228ENST00000508974 KIF3CO14782 793 aa19.28■□□□□ 0.68
UBE2D3-228ENST00000508974 LMNB1P20700 586 aa19.28■□□□□ 0.68
UBE2D3-228ENST00000508974 HDGFL1Q5TGJ6 251 aa19.28■□□□□ 0.68
UBE2D3-228ENST00000508974 SUSD4Q5VX71 490 aa19.28■□□□□ 0.68
UBE2D3-228ENST00000508974 GIGYF2Q6Y7W6 1299 aaKnown RBP19.28■□□□□ 0.68
UBE2D3-228ENST00000508974 COPS6Q7L5N1 327 aa19.28■□□□□ 0.68
UBE2D3-228ENST00000508974 XAGE3Q8WTP9 111 aa19.28■□□□□ 0.68
UBE2D3-228ENST00000508974 NYXQ9GZU5 481 aa19.28■□□□□ 0.68
UBE2D3-228ENST00000508974 MRS2Q9HD23 443 aa19.28■□□□□ 0.68
UBE2D3-228ENST00000508974 NPR1P16066 1061 aa19.27■□□□□ 0.68
UBE2D3-228ENST00000508974 ZNF428Q96B54 188 aa19.27■□□□□ 0.68
UBE2D3-228ENST00000508974 DICER1Q9UPY3 1922 aaKnown RBP19.27■□□□□ 0.67
UBE2D3-228ENST00000508974 DUSP27Q5VZP5 1158 aa19.26■□□□□ 0.67
UBE2D3-228ENST00000508974 ZNF34Q8IZ26 560 aa19.26■□□□□ 0.67
UBE2D3-228ENST00000508974 DDX21Q9NR30 783 aaKnown RBP eCLIP19.26■□□□□ 0.67
UBE2D3-228ENST00000508974 ELL2O00472 640 aaPredicted RBP19.25■□□□□ 0.67
UBE2D3-228ENST00000508974 OLFM4Q6UX06 510 aa19.25■□□□□ 0.67
UBE2D3-228ENST00000508974 KLRG2A4D1S0 409 aaPredicted RBP19.24■□□□□ 0.67
UBE2D3-228ENST00000508974 NTSR2O95665 410 aa19.24■□□□□ 0.67
UBE2D3-228ENST00000508974 GNAI1P63096 354 aa19.24■□□□□ 0.67
UBE2D3-228ENST00000508974 IFT57Q9NWB7 429 aa19.24■□□□□ 0.67
UBE2D3-228ENST00000508974 LAMB2P55268 1798 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms