RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 ZNF622Q969S3 477 aaKnown RBP eCLIP29.03■■■□□ 2.24
PACRGL-220ENST00000508952 RNF181Q9P0P0 153 aa29.03■■■□□ 2.24
PACRGL-220ENST00000508952 ST5P78524 1137 aa29.02■■■□□ 2.24
PACRGL-220ENST00000508952 RASSF7Q02833 373 aa29.02■■■□□ 2.24
PACRGL-220ENST00000508952 LMOD3Q0VAK6 560 aa29.02■■■□□ 2.24
PACRGL-220ENST00000508952 HLFQ16534 295 aa29.02■■■□□ 2.24
PACRGL-220ENST00000508952 NBPF5PQ86XG9 351 aaPredicted RBP29.02■■■□□ 2.24
PACRGL-220ENST00000508952 CACNA1SQ13698 1873 aa29.02■■■□□ 2.24
PACRGL-220ENST00000508952 ADAMTS8Q9UP79 889 aa29.01■■■□□ 2.23
PACRGL-220ENST00000508952 NIP7Q9Y221 180 aaKnown RBP eCLIP29.01■■■□□ 2.23
PACRGL-220ENST00000508952 MYL6BP14649 208 aa29■■■□□ 2.23
PACRGL-220ENST00000508952 RUNDC1Q96C34 613 aa29■■■□□ 2.23
PACRGL-220ENST00000508952 PDZRN3Q9UPQ7 1066 aa29■■■□□ 2.23
PACRGL-220ENST00000508952 NUP98P52948 1817 aa28.99■■■□□ 2.23
PACRGL-220ENST00000508952 KIF3CO14782 793 aa28.98■■■□□ 2.23
PACRGL-220ENST00000508952 RGL2O15211 777 aa28.98■■■□□ 2.23
PACRGL-220ENST00000508952 ZNF219Q9P2Y4 722 aaPredicted RBP28.98■■■□□ 2.23
PACRGL-220ENST00000508952 FAM177BA6PVY3 158 aa28.97■■■□□ 2.23
PACRGL-220ENST00000508952 TTLL7Q6ZT98 887 aa28.97■■■□□ 2.23
PACRGL-220ENST00000508952 CCDC88AQ3V6T2 1871 aa28.97■■■□□ 2.23
PACRGL-220ENST00000508952 TRIM35Q9UPQ4 493 aa28.96■■■□□ 2.23
PACRGL-220ENST00000508952 SLX4Q8IY92 1834 aa28.95■■■□□ 2.23
PACRGL-220ENST00000508952 PRELPP51888 382 aa28.95■■■□□ 2.22
PACRGL-220ENST00000508952 NMRK2Q9NPI5 230 aa28.95■■■□□ 2.22
PACRGL-220ENST00000508952 BABAM1Q9NWV8 329 aa28.95■■■□□ 2.22
PACRGL-220ENST00000508952 MAP3K15Q6ZN16 1313 aa28.94■■■□□ 2.22
PACRGL-220ENST00000508952 ARFGEF2Q9Y6D5 1785 aa28.94■■■□□ 2.22
PACRGL-220ENST00000508952 SRGNP10124 158 aa28.94■■■□□ 2.22
PACRGL-220ENST00000508952 KIF6Q6ZMV9 814 aa28.94■■■□□ 2.22
PACRGL-220ENST00000508952 ERVV-1B6SEH8 477 aa28.93■■■□□ 2.22
PACRGL-220ENST00000508952 NFKBIEO00221 500 aa28.93■■■□□ 2.22
PACRGL-220ENST00000508952 C21orf2O43822 256 aa28.93■■■□□ 2.22
PACRGL-220ENST00000508952 EIF2S2P20042 333 aaKnown RBP28.93■■■□□ 2.22
PACRGL-220ENST00000508952 TPTE2Q6XPS3 522 aa28.93■■■□□ 2.22
PACRGL-220ENST00000508952 ZBTB3Q9H5J0 574 aa28.93■■■□□ 2.22
PACRGL-220ENST00000508952 ERBB4Q15303 1308 aa28.93■■■□□ 2.22
PACRGL-220ENST00000508952 FER1L6Q2WGJ9 1857 aa28.92■■■□□ 2.22
PACRGL-220ENST00000508952 LMNB1P20700 586 aa28.92■■■□□ 2.22
PACRGL-220ENST00000508952 ZEB1P37275 1124 aaPredicted RBP28.92■■■□□ 2.22
PACRGL-220ENST00000508952 STYK1Q6J9G0 422 aa28.92■■■□□ 2.22
PACRGL-220ENST00000508952 LAS1LQ9Y4W2 734 aaKnown RBP28.92■■■□□ 2.22
PACRGL-220ENST00000508952 TIAM2Q8IVF5 1701 aa28.91■■■□□ 2.22
PACRGL-220ENST00000508952 CNKSR1Q969H4 720 aa28.91■■■□□ 2.22
PACRGL-220ENST00000508952 MASTLQ96GX5 879 aa28.91■■■□□ 2.22
PACRGL-220ENST00000508952 PRPF40BQ6NWY9 871 aaKnown RBP28.9■■■□□ 2.22
PACRGL-220ENST00000508952 CEP350Q5VT06 3117 aa28.9■■■□□ 2.22
PACRGL-220ENST00000508952 TNRC6CQ9HCJ0 1690 aaKnown RBP28.89■■■□□ 2.22
PACRGL-220ENST00000508952 CHL1O00533 1208 aa28.89■■■□□ 2.22
PACRGL-220ENST00000508952 ANXA1P04083 346 aa28.89■■■□□ 2.22
PACRGL-220ENST00000508952 PDIA6Q15084 440 aa28.89■■■□□ 2.22
PACRGL-220ENST00000508952 KRT24Q2M2I5 525 aa28.89■■■□□ 2.22
PACRGL-220ENST00000508952 PROSER3Q2NL68 480 aa28.89■■■□□ 2.22
PACRGL-220ENST00000508952 GPTP24298 496 aa28.88■■■□□ 2.21
PACRGL-220ENST00000508952 NECTIN2Q92692 538 aa28.88■■■□□ 2.21
PACRGL-220ENST00000508952 GTF2E1P29083 439 aaPredicted RBP28.87■■■□□ 2.21
PACRGL-220ENST00000508952 LRP10Q7Z4F1 713 aa28.87■■■□□ 2.21
PACRGL-220ENST00000508952 KDM2BQ8NHM5 1336 aa28.87■■■□□ 2.21
PACRGL-220ENST00000508952 KLRG2A4D1S0 409 aaPredicted RBP28.86■■■□□ 2.21
PACRGL-220ENST00000508952 NPR1P16066 1061 aa28.86■■■□□ 2.21
PACRGL-220ENST00000508952 NUTM1Q86Y26 1132 aa28.86■■■□□ 2.21
PACRGL-220ENST00000508952 UBN2Q6ZU65 1347 aa28.86■■■□□ 2.21
PACRGL-220ENST00000508952 ABCC12Q96J65 1359 aa28.86■■■□□ 2.21
PACRGL-220ENST00000508952 NYXQ9GZU5 481 aa28.84■■■□□ 2.21
PACRGL-220ENST00000508952 ZC3H4Q9UPT8 1303 aaKnown RBP28.84■■■□□ 2.21
PACRGL-220ENST00000508952 DICER1Q9UPY3 1922 aaKnown RBP28.84■■■□□ 2.21
PACRGL-220ENST00000508952 APAF1O14727 1248 aa28.83■■■□□ 2.21
PACRGL-220ENST00000508952 ERFEQ4G0M1 354 aa28.83■■■□□ 2.21
PACRGL-220ENST00000508952 GIGYF2Q6Y7W6 1299 aaKnown RBP28.83■■■□□ 2.21
PACRGL-220ENST00000508952 TOMM70O94826 608 aa28.82■■■□□ 2.2
PACRGL-220ENST00000508952 HSPA6P17066 643 aa28.82■■■□□ 2.2
PACRGL-220ENST00000508952 ZNF34Q8IZ26 560 aa28.82■■■□□ 2.2
PACRGL-220ENST00000508952 RRAGCQ9HB90 399 aa28.82■■■□□ 2.2
PACRGL-220ENST00000508952 SUSD4Q5VX71 490 aa28.81■■■□□ 2.2
PACRGL-220ENST00000508952 TAOK3Q9H2K8 898 aa28.81■■■□□ 2.2
PACRGL-220ENST00000508952 IBTKQ9P2D0 1353 aaPredicted RBP28.8■■■□□ 2.2
PACRGL-220ENST00000508952 CCDC184Q52MB2 194 aa28.8■■■□□ 2.2
PACRGL-220ENST00000508952 C7orf43Q8WVR3 580 aa28.8■■■□□ 2.2
PACRGL-220ENST00000508952 LTBP3Q9NS15 1303 aa28.79■■■□□ 2.2
PACRGL-220ENST00000508952 AIMP1Q12904 312 aaKnown RBP28.79■■■□□ 2.2
PACRGL-220ENST00000508952 SOGA3Q5TF21 947 aa28.79■■■□□ 2.2
PACRGL-220ENST00000508952 CFAP44Q96MT7 982 aa28.79■■■□□ 2.2
PACRGL-220ENST00000508952 ANKRD36CQ5JPF3 1778 aa28.79■■■□□ 2.2
PACRGL-220ENST00000508952 NTSR2O95665 410 aa28.78■■■□□ 2.2
PACRGL-220ENST00000508952 COPS6Q7L5N1 327 aa28.78■■■□□ 2.2
PACRGL-220ENST00000508952 C16orf71Q8IYS4 520 aaPredicted RBP28.78■■■□□ 2.2
PACRGL-220ENST00000508952 XAGE3Q8WTP9 111 aa28.78■■■□□ 2.2
PACRGL-220ENST00000508952 GLTPD2A6NH11 291 aa28.77■■■□□ 2.2
PACRGL-220ENST00000508952 OLFM4Q6UX06 510 aa28.77■■■□□ 2.2
PACRGL-220ENST00000508952 DDX21Q9NR30 783 aaKnown RBP eCLIP28.77■■■□□ 2.2
PACRGL-220ENST00000508952 MBIPQ9NS73 344 aa28.77■■■□□ 2.2
PACRGL-220ENST00000508952 CHPF2Q9P2E5 772 aa28.77■■■□□ 2.2
PACRGL-220ENST00000508952 CRY2Q49AN0 593 aa28.76■■■□□ 2.19
PACRGL-220ENST00000508952 CCDC93Q567U6 631 aa28.76■■■□□ 2.19
PACRGL-220ENST00000508952 HDGFL1Q5TGJ6 251 aa28.76■■■□□ 2.19
PACRGL-220ENST00000508952 RIC1Q4ADV7 1423 aa28.76■■■□□ 2.19
PACRGL-220ENST00000508952 PARP10Q53GL7 1025 aa28.75■■■□□ 2.19
PACRGL-220ENST00000508952 ZNF316A6NFI3 1004 aaPredicted RBP28.74■■■□□ 2.19
PACRGL-220ENST00000508952 ALDH1B1P30837 517 aa28.74■■■□□ 2.19
PACRGL-220ENST00000508952 PPP1R42Q7Z4L9 355 aa28.74■■■□□ 2.19
PACRGL-220ENST00000508952 RBM46Q8TBY0 533 aaKnown RBP28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms