RNA–Protein interactions for RNA: ENST00000508602.5

PTPN20-219, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-219ENST00000508602 A0A1W2PP64 1363 aa13.72□□□□□ -0.21
PTPN20-219ENST00000508602 RTL1A6NKG5 1358 aa13.72□□□□□ -0.21
PTPN20-219ENST00000508602 RPS6KA4O75676 772 aa13.72□□□□□ -0.21
PTPN20-219ENST00000508602 RC3H1Q5TC82 1133 aaKnown RBP13.72□□□□□ -0.21
PTPN20-219ENST00000508602 TMOD3Q9NYL9 352 aa13.72□□□□□ -0.21
PTPN20-219ENST00000508602 CNTNAP4Q9C0A0 1308 aa13.71□□□□□ -0.21
PTPN20-219ENST00000508602 G3V3G9 751 aa13.71□□□□□ -0.21
PTPN20-219ENST00000508602 DEFB115Q30KQ5 88 aa13.71□□□□□ -0.21
PTPN20-219ENST00000508602 HDGFL2Q7Z4V5 671 aaPredicted RBP13.71□□□□□ -0.21
PTPN20-219ENST00000508602 LDHDQ86WU2 507 aa13.71□□□□□ -0.21
PTPN20-219ENST00000508602 MCOLN1Q9GZU1 580 aa13.71□□□□□ -0.21
PTPN20-219ENST00000508602 SLC12A5Q9H2X9 1139 aa13.71□□□□□ -0.21
PTPN20-219ENST00000508602 SRP68Q9UHB9 627 aaKnown RBP13.71□□□□□ -0.21
PTPN20-219ENST00000508602 POLRMTO00411 1230 aaKnown RBP13.7□□□□□ -0.22
PTPN20-219ENST00000508602 SMG6Q86US8 1419 aaKnown RBP13.7□□□□□ -0.22
PTPN20-219ENST00000508602 DDNO94850 711 aaPredicted RBP13.69□□□□□ -0.22
PTPN20-219ENST00000508602 PRPF38BQ5VTL8 546 aaKnown RBP13.69□□□□□ -0.22
PTPN20-219ENST00000508602 TMC1Q8TDI8 760 aa13.69□□□□□ -0.22
PTPN20-219ENST00000508602 MARVELD3Q96A59 401 aa13.69□□□□□ -0.22
PTPN20-219ENST00000508602 TSKSQ9UJT2 592 aa13.69□□□□□ -0.22
PTPN20-219ENST00000508602 USP42Q9H9J4 1324 aaKnown RBP13.68□□□□□ -0.22
PTPN20-219ENST00000508602 CACNA1SQ13698 1873 aa13.68□□□□□ -0.22
PTPN20-219ENST00000508602 RRS1Q15050 365 aaKnown RBP13.68□□□□□ -0.22
PTPN20-219ENST00000508602 ERFEQ4G0M1 354 aa13.68□□□□□ -0.22
PTPN20-219ENST00000508602 TTLL6Q8N841 843 aa13.68□□□□□ -0.22
PTPN20-219ENST00000508602 COG3Q96JB2 828 aa13.68□□□□□ -0.22
PTPN20-219ENST00000508602 ANKRD31Q8N7Z5 1873 aa13.67□□□□□ -0.22
PTPN20-219ENST00000508602 TM4SF1P30408 202 aa13.67□□□□□ -0.22
PTPN20-219ENST00000508602 BOLA1Q9Y3E2 137 aa13.67□□□□□ -0.22
PTPN20-219ENST00000508602 TRPM7Q96QT4 1865 aa13.67□□□□□ -0.22
PTPN20-219ENST00000508602 TAF1DQ9H5J8 278 aaPredicted RBP13.66□□□□□ -0.22
PTPN20-219ENST00000508602 TERF2IPQ9NYB0 399 aa13.66□□□□□ -0.22
PTPN20-219ENST00000508602 TJP1Q07157 1748 aa13.65□□□□□ -0.22
PTPN20-219ENST00000508602 HSP90AB2PQ58FF8 381 aa13.65□□□□□ -0.22
PTPN20-219ENST00000508602 EFCAB3Q8N7B9 438 aa13.65□□□□□ -0.22
PTPN20-219ENST00000508602 BEGAINQ9BUH8 593 aa13.65□□□□□ -0.22
PTPN20-219ENST00000508602 INSRP06213 1382 aa13.65□□□□□ -0.22
PTPN20-219ENST00000508602 NCAPD2Q15021 1401 aa13.64□□□□□ -0.23
PTPN20-219ENST00000508602 COL11A2P13942 1736 aaPredicted RBP13.64□□□□□ -0.23
PTPN20-219ENST00000508602 IQCA1LA6NCM1 817 aa13.64□□□□□ -0.23
PTPN20-219ENST00000508602 CAPNS2Q96L46 248 aa13.64□□□□□ -0.23
PTPN20-219ENST00000508602 ABT1Q9ULW3 272 aaKnown RBP13.63□□□□□ -0.23
PTPN20-219ENST00000508602 SPG7Q9UQ90 795 aa13.63□□□□□ -0.23
PTPN20-219ENST00000508602 SLX4Q8IY92 1834 aa13.62□□□□□ -0.23
PTPN20-219ENST00000508602 DGKZQ13574 1117 aa13.62□□□□□ -0.23
PTPN20-219ENST00000508602 EAPPQ56P03 285 aaPredicted RBP13.62□□□□□ -0.23
PTPN20-219ENST00000508602 CARMIL3Q8ND23 1372 aa13.61□□□□□ -0.23
PTPN20-219ENST00000508602 RIOK3O14730 519 aaKnown RBP13.61□□□□□ -0.23
PTPN20-219ENST00000508602 PHKG2P15735 406 aa13.61□□□□□ -0.23
PTPN20-219ENST00000508602 CRKLP46109 303 aaKnown RBP13.61□□□□□ -0.23
PTPN20-219ENST00000508602 SOX10P56693 466 aa13.61□□□□□ -0.23
PTPN20-219ENST00000508602 C2CD5Q86YS7 1000 aa13.61□□□□□ -0.23
PTPN20-219ENST00000508602 CNTROBQ8N137 903 aa13.61□□□□□ -0.23
PTPN20-219ENST00000508602 GPR101Q96P66 508 aaPredicted RBP13.61□□□□□ -0.23
PTPN20-219ENST00000508602 LTBP3Q9NS15 1303 aa13.61□□□□□ -0.23
PTPN20-219ENST00000508602 ARFGEF2Q9Y6D5 1785 aa13.6□□□□□ -0.23
PTPN20-219ENST00000508602 ROCK2O75116 1388 aaKnown RBP13.6□□□□□ -0.23
PTPN20-219ENST00000508602 MAP1SQ66K74 1059 aaPredicted RBP13.6□□□□□ -0.23
PTPN20-219ENST00000508602 CYP4F22Q6NT55 531 aa13.6□□□□□ -0.23
PTPN20-219ENST00000508602 FLT4P35916 1363 aa13.59□□□□□ -0.23
PTPN20-219ENST00000508602 C21orf2O43822 256 aa13.59□□□□□ -0.23
PTPN20-219ENST00000508602 ECE1P42892 770 aa13.59□□□□□ -0.23
PTPN20-219ENST00000508602 EMP3P54852 163 aa13.59□□□□□ -0.23
PTPN20-219ENST00000508602 GRM1Q13255 1194 aa13.59□□□□□ -0.23
PTPN20-219ENST00000508602 NFIXQ14938 502 aa13.59□□□□□ -0.23
PTPN20-219ENST00000508602 RNF25Q96BH1 459 aaPredicted RBP13.59□□□□□ -0.23
PTPN20-219ENST00000508602 H0YIN7 160 aa13.58□□□□□ -0.24
PTPN20-219ENST00000508602 USPL1Q5W0Q7 1092 aa13.58□□□□□ -0.24
PTPN20-219ENST00000508602 PAXIP1Q6ZW49 1069 aaPredicted RBP13.58□□□□□ -0.24
PTPN20-219ENST00000508602 IFNL2Q8IZJ0 200 aa13.58□□□□□ -0.24
PTPN20-219ENST00000508602 TAOK3Q9H2K8 898 aa13.58□□□□□ -0.24
PTPN20-219ENST00000508602 TONSLQ96HA7 1378 aa13.58□□□□□ -0.24
PTPN20-219ENST00000508602 KIF20BQ96Q89 1820 aa13.57□□□□□ -0.24
PTPN20-219ENST00000508602 AOC2O75106 756 aa13.57□□□□□ -0.24
PTPN20-219ENST00000508602 FMR1Q06787 632 aaKnown RBP eCLIP13.57□□□□□ -0.24
PTPN20-219ENST00000508602 DDX21Q9NR30 783 aaKnown RBP eCLIP13.57□□□□□ -0.24
PTPN20-219ENST00000508602 ANKRD26Q9UPS8 1709 aa13.56□□□□□ -0.24
PTPN20-219ENST00000508602 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.56□□□□□ -0.24
PTPN20-219ENST00000508602 SERPINB2P05120 415 aa13.56□□□□□ -0.24
PTPN20-219ENST00000508602 EPHX2P34913 555 aa13.56□□□□□ -0.24
PTPN20-219ENST00000508602 INTS5Q6P9B9 1019 aaKnown RBP13.56□□□□□ -0.24
PTPN20-219ENST00000508602 ZFP91Q96JP5 570 aaPredicted RBP13.56□□□□□ -0.24
PTPN20-219ENST00000508602 HACL1Q9UJ83 578 aa13.56□□□□□ -0.24
PTPN20-219ENST00000508602 KIF24Q5T7B8 1368 aa13.56□□□□□ -0.24
PTPN20-219ENST00000508602 CA12O43570 354 aa13.55□□□□□ -0.24
PTPN20-219ENST00000508602 ZPR1O75312 459 aa13.55□□□□□ -0.24
PTPN20-219ENST00000508602 MAP2K2P36507 400 aa13.55□□□□□ -0.24
PTPN20-219ENST00000508602 L3MBTL2Q969R5 705 aa13.55□□□□□ -0.24
PTPN20-219ENST00000508602 ZNF541Q9H0D2 1346 aa13.55□□□□□ -0.24
PTPN20-219ENST00000508602 ERVV-2B6SEH9 535 aa13.54□□□□□ -0.24
PTPN20-219ENST00000508602 PTCD1O75127 700 aaKnown RBP13.54□□□□□ -0.24
PTPN20-219ENST00000508602 ZNF622Q969S3 477 aaKnown RBP eCLIP13.54□□□□□ -0.24
PTPN20-219ENST00000508602 GGNBP2Q9H3C7 697 aa13.54□□□□□ -0.24
PTPN20-219ENST00000508602 FYB1O15117 783 aa13.53□□□□□ -0.24
PTPN20-219ENST00000508602 PNMA8AQ86V59 439 aaPredicted RBP13.53□□□□□ -0.24
PTPN20-219ENST00000508602 BCL2L12Q9HB09 334 aa13.53□□□□□ -0.24
PTPN20-219ENST00000508602 CST9Q5W186 159 aa13.52□□□□□ -0.25
PTPN20-219ENST00000508602 TLL2Q9Y6L7 1015 aa13.52□□□□□ -0.25
PTPN20-219ENST00000508602 SOS1Q07889 1333 aaPredicted RBP13.52□□□□□ -0.25
PTPN20-219ENST00000508602 RNF123Q5XPI4 1314 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms