RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 STK31Q9BXU1 1019 aa11.09□□□□□ -0.63
USP46-207ENST00000508499 CCDC87Q9NVE4 849 aa11.09□□□□□ -0.63
USP46-207ENST00000508499 RCAN3Q9UKA8 241 aa11.09□□□□□ -0.63
USP46-207ENST00000508499 COL24A1Q17RW2 1714 aa11.08□□□□□ -0.64
USP46-207ENST00000508499 RNF123Q5XPI4 1314 aa11.08□□□□□ -0.64
USP46-207ENST00000508499 KIF16BQ96L93 1317 aa11.08□□□□□ -0.64
USP46-207ENST00000508499 CRKLP46109 303 aaKnown RBP11.08□□□□□ -0.64
USP46-207ENST00000508499 ILDR2Q71H61 639 aa11.08□□□□□ -0.64
USP46-207ENST00000508499 SSH1Q8WYL5 1049 aa11.08□□□□□ -0.64
USP46-207ENST00000508499 PTPRCP08575 1304 aa11.07□□□□□ -0.64
USP46-207ENST00000508499 NBPF26B4DH59 902 aa11.07□□□□□ -0.64
USP46-207ENST00000508499 ELL2O00472 640 aaPredicted RBP11.07□□□□□ -0.64
USP46-207ENST00000508499 RPS6KA4O75676 772 aa11.07□□□□□ -0.64
USP46-207ENST00000508499 CENPBP07199 599 aaPredicted RBP11.07□□□□□ -0.64
USP46-207ENST00000508499 EIF5P55010 431 aaKnown RBP11.07□□□□□ -0.64
USP46-207ENST00000508499 NBPF14Q5TI25 921 aa11.07□□□□□ -0.64
USP46-207ENST00000508499 NBPF10Q6P3W6 841 aaKnown RBP11.07□□□□□ -0.64
USP46-207ENST00000508499 MRPL50Q8N5N7 158 aaKnown RBP11.07□□□□□ -0.64
USP46-207ENST00000508499 NBPF15Q8N660 670 aa11.07□□□□□ -0.64
USP46-207ENST00000508499 PXDNLA1KZ92 1463 aa11.07□□□□□ -0.64
USP46-207ENST00000508499 SSFA2P28290 1259 aa11.06□□□□□ -0.64
USP46-207ENST00000508499 EN1Q05925 392 aaPredicted RBP11.06□□□□□ -0.64
USP46-207ENST00000508499 EZH2Q15910 746 aaKnown RBP11.06□□□□□ -0.64
USP46-207ENST00000508499 CHPF2Q9P2E5 772 aa11.06□□□□□ -0.64
USP46-207ENST00000508499 EIF2S2P20042 333 aaKnown RBP11.05□□□□□ -0.64
USP46-207ENST00000508499 FLAD1Q8NFF5 587 aa11.05□□□□□ -0.64
USP46-207ENST00000508499 ZBTB1Q9Y2K1 713 aa11.05□□□□□ -0.64
USP46-207ENST00000508499 COL15A1P39059 1388 aa11.04□□□□□ -0.64
USP46-207ENST00000508499 CASZ1Q86V15 1759 aa11.04□□□□□ -0.64
USP46-207ENST00000508499 A0A087WZG4 1122 aa11.04□□□□□ -0.64
USP46-207ENST00000508499 ERVV-1B6SEH8 477 aa11.04□□□□□ -0.64
USP46-207ENST00000508499 IPO8O15397 1037 aaKnown RBP11.04□□□□□ -0.64
USP46-207ENST00000508499 A1BGP04217 495 aa11.04□□□□□ -0.64
USP46-207ENST00000508499 FLIIQ13045 1269 aa11.04□□□□□ -0.64
USP46-207ENST00000508499 SMC4Q9NTJ3 1288 aa11.04□□□□□ -0.64
USP46-207ENST00000508499 AFDNP55196 1824 aaKnown RBP11.03□□□□□ -0.64
USP46-207ENST00000508499 PROSER3Q2NL68 480 aa11.03□□□□□ -0.64
USP46-207ENST00000508499 RTCBQ9Y3I0 505 aaKnown RBP11.03□□□□□ -0.64
USP46-207ENST00000508499 ATP10DQ9P241 1426 aa11.03□□□□□ -0.64
USP46-207ENST00000508499 DDX58O95786 925 aaKnown RBP11.02□□□□□ -0.64
USP46-207ENST00000508499 SLC15A2Q16348 729 aa11.02□□□□□ -0.64
USP46-207ENST00000508499 CLEC4GQ6UXB4 293 aa11.02□□□□□ -0.64
USP46-207ENST00000508499 DEFB132Q7Z7B7 95 aa11.02□□□□□ -0.64
USP46-207ENST00000508499 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.02□□□□□ -0.64
USP46-207ENST00000508499 AK7Q96M32 723 aa11.02□□□□□ -0.64
USP46-207ENST00000508499 GNPATO15228 680 aa11.01□□□□□ -0.65
USP46-207ENST00000508499 BCAR3O75815 825 aa11.01□□□□□ -0.65
USP46-207ENST00000508499 MS4A1P11836 297 aa11.01□□□□□ -0.65
USP46-207ENST00000508499 KCNQ4P56696 695 aa11.01□□□□□ -0.65
USP46-207ENST00000508499 PDE3AQ14432 1141 aa11.01□□□□□ -0.65
USP46-207ENST00000508499 KSR2Q6VAB6 950 aa11.01□□□□□ -0.65
USP46-207ENST00000508499 ATF7IPQ6VMQ6 1270 aa11.01□□□□□ -0.65
USP46-207ENST00000508499 PELP1Q8IZL8 1130 aaKnown RBP11.01□□□□□ -0.65
USP46-207ENST00000508499 PLBD2Q8NHP8 589 aa11.01□□□□□ -0.65
USP46-207ENST00000508499 API5Q9BZZ5 524 aaKnown RBP11.01□□□□□ -0.65
USP46-207ENST00000508499 ABCC4O15439 1325 aa11.01□□□□□ -0.65
USP46-207ENST00000508499 MAP3K15Q6ZN16 1313 aa11.01□□□□□ -0.65
USP46-207ENST00000508499 NRXN2Q9P2S2 1712 aa11.01□□□□□ -0.65
USP46-207ENST00000508499 ADCY9O60503 1353 aa11.01□□□□□ -0.65
USP46-207ENST00000508499 CANXP27824 592 aaKnown RBP11.01□□□□□ -0.65
USP46-207ENST00000508499 ZNF827Q17R98 1081 aa11.01□□□□□ -0.65
USP46-207ENST00000508499 ZKSCAN2Q63HK3 967 aa11.01□□□□□ -0.65
USP46-207ENST00000508499 ANKRD13DQ6ZTN6 518 aa11.01□□□□□ -0.65
USP46-207ENST00000508499 COPS6Q7L5N1 327 aa11.01□□□□□ -0.65
USP46-207ENST00000508499 G2E3Q7L622 706 aa11.01□□□□□ -0.65
USP46-207ENST00000508499 PHF12Q96QT6 1004 aa11.01□□□□□ -0.65
USP46-207ENST00000508499 PHAXQ9H814 394 aaKnown RBP11.01□□□□□ -0.65
USP46-207ENST00000508499 NARFQ9UHQ1 456 aa11.01□□□□□ -0.65
USP46-207ENST00000508499 USP42Q9H9J4 1324 aaKnown RBP11□□□□□ -0.65
USP46-207ENST00000508499 LAMB2P55268 1798 aa11□□□□□ -0.65
USP46-207ENST00000508499 TRIM27P14373 513 aa11□□□□□ -0.65
USP46-207ENST00000508499 MYL6BP14649 208 aa11□□□□□ -0.65
USP46-207ENST00000508499 TRIM28Q13263 835 aaKnown RBP11□□□□□ -0.65
USP46-207ENST00000508499 TRAPPC3LQ5T215 181 aa11□□□□□ -0.65
USP46-207ENST00000508499 GIGYF2Q6Y7W6 1299 aaKnown RBP11□□□□□ -0.65
USP46-207ENST00000508499 NPM2Q86SE8 214 aaKnown RBP11□□□□□ -0.65
USP46-207ENST00000508499 XAGE3Q8WTP9 111 aa11□□□□□ -0.65
USP46-207ENST00000508499 NECTIN2Q92692 538 aa11□□□□□ -0.65
USP46-207ENST00000508499 STK32BQ9NY57 414 aa11□□□□□ -0.65
USP46-207ENST00000508499 NOB1Q9ULX3 412 aaKnown RBP11□□□□□ -0.65
USP46-207ENST00000508499 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.99□□□□□ -0.65
USP46-207ENST00000508499 CAMTA2O94983 1202 aa10.99□□□□□ -0.65
USP46-207ENST00000508499 ANXA1P04083 346 aa10.99□□□□□ -0.65
USP46-207ENST00000508499 RRP1P56182 461 aaKnown RBP10.99□□□□□ -0.65
USP46-207ENST00000508499 FKBP5Q13451 457 aaPredicted RBP10.99□□□□□ -0.65
USP46-207ENST00000508499 HSP90AB3PQ58FF7 597 aa10.99□□□□□ -0.65
USP46-207ENST00000508499 KIF6Q6ZMV9 814 aa10.99□□□□□ -0.65
USP46-207ENST00000508499 DZIP3Q86Y13 1208 aaKnown RBP10.99□□□□□ -0.65
USP46-207ENST00000508499 SLC16A10Q8TF71 515 aa10.99□□□□□ -0.65
USP46-207ENST00000508499 ARHGEF1Q92888 912 aaKnown RBP10.99□□□□□ -0.65
USP46-207ENST00000508499 BCL2L13Q9BXK5 485 aa10.99□□□□□ -0.65
USP46-207ENST00000508499 ANO8Q9HCE9 1232 aaPredicted RBP10.99□□□□□ -0.65
USP46-207ENST00000508499 PNPLA7Q6ZV29 1317 aa10.99□□□□□ -0.65
USP46-207ENST00000508499 PI4KAP2A4QPH2 592 aa10.98□□□□□ -0.65
USP46-207ENST00000508499 INTS3Q68E01 1043 aaKnown RBP10.98□□□□□ -0.65
USP46-207ENST00000508499 MAMSTRQ6ZN01 415 aa10.98□□□□□ -0.65
USP46-207ENST00000508499 TTLL7Q6ZT98 887 aa10.98□□□□□ -0.65
USP46-207ENST00000508499 AMIGO3Q86WK7 504 aa10.98□□□□□ -0.65
USP46-207ENST00000508499 PI4KAP1Q8N8J0 262 aa10.98□□□□□ -0.65
USP46-207ENST00000508499 DNAAF4Q8WXU2 420 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms