RNA–Protein interactions for RNA: ENST00000508382.1

SGCA-206, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-206ENST00000508382 ZBED9Q6R2W3 1325 aa17.98■□□□□ 0.47
SGCA-206ENST00000508382 ZNF541Q9H0D2 1346 aa17.98■□□□□ 0.47
SGCA-206ENST00000508382 IQCA1LA6NCM1 817 aa17.98■□□□□ 0.47
SGCA-206ENST00000508382 CC2D1BQ5T0F9 858 aaKnown RBP17.98■□□□□ 0.47
SGCA-206ENST00000508382 MAP1SQ66K74 1059 aaPredicted RBP17.98■□□□□ 0.47
SGCA-206ENST00000508382 BICDL1Q6ZP65 573 aa17.98■□□□□ 0.47
SGCA-206ENST00000508382 FAM9BQ8IZU0 186 aa17.98■□□□□ 0.47
SGCA-206ENST00000508382 TSKSQ9UJT2 592 aa17.98■□□□□ 0.47
SGCA-206ENST00000508382 TRPM7Q96QT4 1865 aa17.98■□□□□ 0.47
SGCA-206ENST00000508382 UBR2Q8IWV8 1755 aa17.97■□□□□ 0.47
SGCA-206ENST00000508382 FMR1Q06787 632 aaKnown RBP eCLIP17.97■□□□□ 0.47
SGCA-206ENST00000508382 AEBP1Q8IUX7 1158 aa17.97■□□□□ 0.47
SGCA-206ENST00000508382 PNISRQ8TF01 805 aaKnown RBP17.97■□□□□ 0.47
SGCA-206ENST00000508382 CCDC184Q52MB2 194 aa17.96■□□□□ 0.47
SGCA-206ENST00000508382 PRR5LQ6MZQ0 368 aa17.96■□□□□ 0.47
SGCA-206ENST00000508382 CNTROBQ8N137 903 aa17.96■□□□□ 0.47
SGCA-206ENST00000508382 TBC1D9BQ66K14 1250 aa17.95■□□□□ 0.46
SGCA-206ENST00000508382 BRIP1Q9BX63 1249 aa17.95■□□□□ 0.46
SGCA-206ENST00000508382 CLEC11AQ9Y240 323 aa17.95■□□□□ 0.46
SGCA-206ENST00000508382 SLC39A6Q13433 755 aa17.94■□□□□ 0.46
SGCA-206ENST00000508382 AMOTQ4VCS5 1084 aa17.94■□□□□ 0.46
SGCA-206ENST00000508382 MCOLN1Q9GZU1 580 aa17.94■□□□□ 0.46
SGCA-206ENST00000508382 ABT1Q9ULW3 272 aaKnown RBP17.94■□□□□ 0.46
SGCA-206ENST00000508382 EPHX2P34913 555 aa17.93■□□□□ 0.46
SGCA-206ENST00000508382 TNNT2P45379 298 aaPredicted RBP17.93■□□□□ 0.46
SGCA-206ENST00000508382 CNGB1Q14028 1251 aaPredicted RBP17.93■□□□□ 0.46
SGCA-206ENST00000508382 PRPF40BQ6NWY9 871 aaKnown RBP17.93■□□□□ 0.46
SGCA-206ENST00000508382 CFAP44Q96MT7 982 aa17.93■□□□□ 0.46
SGCA-206ENST00000508382 HACL1Q9UJ83 578 aa17.93■□□□□ 0.46
SGCA-206ENST00000508382 GTF3C3Q9Y5Q9 886 aa17.93■□□□□ 0.46
SGCA-206ENST00000508382 MRC1P22897 1456 aa17.93■□□□□ 0.46
SGCA-206ENST00000508382 PDE6BP35913 854 aa17.92■□□□□ 0.46
SGCA-206ENST00000508382 CYP4F22Q6NT55 531 aa17.92■□□□□ 0.46
SGCA-206ENST00000508382 C7orf43Q8WVR3 580 aa17.92■□□□□ 0.46
SGCA-206ENST00000508382 CAPNS2Q96L46 248 aa17.92■□□□□ 0.46
SGCA-206ENST00000508382 RNF123Q5XPI4 1314 aa17.92■□□□□ 0.46
SGCA-206ENST00000508382 C1orf141Q5JVX7 400 aa17.91■□□□□ 0.46
SGCA-206ENST00000508382 LGR6Q9HBX8 967 aa17.91■□□□□ 0.46
SGCA-206ENST00000508382 BCORQ6W2J9 1755 aa17.9■□□□□ 0.46
SGCA-206ENST00000508382 CANXP27824 592 aaKnown RBP17.9■□□□□ 0.46
SGCA-206ENST00000508382 PPP2R1AP30153 589 aa17.9■□□□□ 0.46
SGCA-206ENST00000508382 EIF5P55010 431 aaKnown RBP17.9■□□□□ 0.46
SGCA-206ENST00000508382 SLC52A2Q9HAB3 445 aa17.9■□□□□ 0.46
SGCA-206ENST00000508382 DDX21Q9NR30 783 aaKnown RBP eCLIP17.9■□□□□ 0.46
SGCA-206ENST00000508382 AOC2O75106 756 aa17.89■□□□□ 0.45
SGCA-206ENST00000508382 SRGNP10124 158 aa17.89■□□□□ 0.45
SGCA-206ENST00000508382 GRM1Q13255 1194 aa17.89■□□□□ 0.45
SGCA-206ENST00000508382 OLFM4Q6UX06 510 aa17.89■□□□□ 0.45
SGCA-206ENST00000508382 GPR101Q96P66 508 aaPredicted RBP17.89■□□□□ 0.45
SGCA-206ENST00000508382 ZNF277Q9NRM2 450 aaPredicted RBP17.89■□□□□ 0.45
SGCA-206ENST00000508382 PDZRN3Q9UPQ7 1066 aa17.89■□□□□ 0.45
SGCA-206ENST00000508382 COL4A5P29400 1685 aa17.88■□□□□ 0.45
SGCA-206ENST00000508382 STYK1Q6J9G0 422 aa17.88■□□□□ 0.45
SGCA-206ENST00000508382 CNKSR1Q969H4 720 aa17.88■□□□□ 0.45
SGCA-206ENST00000508382 CST9Q5W186 159 aa17.87■□□□□ 0.45
SGCA-206ENST00000508382 PAXIP1Q6ZW49 1069 aaPredicted RBP17.86■□□□□ 0.45
SGCA-206ENST00000508382 PNMA8AQ86V59 439 aaPredicted RBP17.86■□□□□ 0.45
SGCA-206ENST00000508382 WDR43Q15061 677 aaKnown RBP eCLIP17.85■□□□□ 0.45
SGCA-206ENST00000508382 MORC1Q86VD1 984 aa17.85■□□□□ 0.45
SGCA-206ENST00000508382 MASTLQ96GX5 879 aa17.85■□□□□ 0.45
SGCA-206ENST00000508382 BEGAINQ9BUH8 593 aa17.85■□□□□ 0.45
SGCA-206ENST00000508382 TBC1D2BQ9UPU7 963 aa17.85■□□□□ 0.45
SGCA-206ENST00000508382 FZD9O00144 591 aa17.84■□□□□ 0.45
SGCA-206ENST00000508382 TRAF5O00463 557 aa17.84■□□□□ 0.45
SGCA-206ENST00000508382 NEFLP07196 543 aa17.84■□□□□ 0.45
SGCA-206ENST00000508382 FKBP4Q02790 459 aaKnown RBP eCLIP17.84■□□□□ 0.45
SGCA-206ENST00000508382 CCDC93Q567U6 631 aa17.84■□□□□ 0.45
SGCA-206ENST00000508382 SOGA3Q5TF21 947 aa17.84■□□□□ 0.45
SGCA-206ENST00000508382 SULT6B1Q6IMI4 303 aa17.84■□□□□ 0.45
SGCA-206ENST00000508382 SNED1Q8TER0 1413 aa17.83■□□□□ 0.45
SGCA-206ENST00000508382 RNMTO43148 476 aaKnown RBP17.83■□□□□ 0.44
SGCA-206ENST00000508382 ECE1P42892 770 aa17.83■□□□□ 0.44
SGCA-206ENST00000508382 DGKZQ13574 1117 aa17.83■□□□□ 0.44
SGCA-206ENST00000508382 AKAP4Q5JQC9 854 aa17.83■□□□□ 0.44
SGCA-206ENST00000508382 VSIG10Q8N0Z9 540 aa17.83■□□□□ 0.44
SGCA-206ENST00000508382 TLL2Q9Y6L7 1015 aa17.83■□□□□ 0.44
SGCA-206ENST00000508382 CNBD1Q8NA66 436 aa17.82■□□□□ 0.44
SGCA-206ENST00000508382 SIPA1L3O60292 1781 aaPredicted RBP17.81■□□□□ 0.44
SGCA-206ENST00000508382 CFAP53Q96M91 514 aa17.81■□□□□ 0.44
SGCA-206ENST00000508382 A0A087WZG4 1122 aa17.8■□□□□ 0.44
SGCA-206ENST00000508382 CAMTA2O94983 1202 aa17.8■□□□□ 0.44
SGCA-206ENST00000508382 MAP2K2P36507 400 aa17.8■□□□□ 0.44
SGCA-206ENST00000508382 GPC2Q8N158 579 aa17.8■□□□□ 0.44
SGCA-206ENST00000508382 NGEFQ8N5V2 710 aa17.8■□□□□ 0.44
SGCA-206ENST00000508382 IARSP41252 1262 aaKnown RBP17.79■□□□□ 0.44
SGCA-206ENST00000508382 EPS15P42566 896 aa17.79■□□□□ 0.44
SGCA-206ENST00000508382 SOX10P56693 466 aa17.79■□□□□ 0.44
SGCA-206ENST00000508382 SCNN1DP51172 638 aa17.78■□□□□ 0.44
SGCA-206ENST00000508382 ST5P78524 1137 aa17.78■□□□□ 0.44
SGCA-206ENST00000508382 SYNE4Q8N205 404 aa17.78■□□□□ 0.44
SGCA-206ENST00000508382 ZIC5Q96T25 663 aa17.78■□□□□ 0.44
SGCA-206ENST00000508382 SETDB2Q96T68 719 aa17.78■□□□□ 0.44
SGCA-206ENST00000508382 IL13P35225 146 aa17.77■□□□□ 0.44
SGCA-206ENST00000508382 ZNF330Q9Y3S2 320 aaPredicted RBP17.77■□□□□ 0.44
SGCA-206ENST00000508382 KLRG2A4D1S0 409 aaPredicted RBP17.76■□□□□ 0.43
SGCA-206ENST00000508382 PRPF38BQ5VTL8 546 aaKnown RBP17.76■□□□□ 0.43
SGCA-206ENST00000508382 SAPCD2Q86UD0 394 aa17.76■□□□□ 0.43
SGCA-206ENST00000508382 GJA3Q9Y6H8 435 aa17.76■□□□□ 0.43
SGCA-206ENST00000508382 STARD3NLO95772 234 aa17.75■□□□□ 0.43
SGCA-206ENST00000508382 A1BGP04217 495 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms