RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 SENP3-EIF4A1A0A087X0R7 540 aa18.8■□□□□ 0.6
RAB28-205ENST00000508274 WDR43Q15061 677 aaKnown RBP eCLIP18.8■□□□□ 0.6
RAB28-205ENST00000508274 CLEC4GQ6UXB4 293 aa18.8■□□□□ 0.6
RAB28-205ENST00000508274 NGEFQ8N5V2 710 aa18.8■□□□□ 0.6
RAB28-205ENST00000508274 TTLL6Q8N841 843 aa18.8■□□□□ 0.6
RAB28-205ENST00000508274 CCDC88AQ3V6T2 1871 aa18.79■□□□□ 0.6
RAB28-205ENST00000508274 NPHP1O15259 732 aa18.79■□□□□ 0.6
RAB28-205ENST00000508274 HLFQ16534 295 aa18.79■□□□□ 0.6
RAB28-205ENST00000508274 ADAMTS8Q9UP79 889 aa18.79■□□□□ 0.6
RAB28-205ENST00000508274 ZNF652Q9Y2D9 606 aa18.79■□□□□ 0.6
RAB28-205ENST00000508274 ZNF622Q969S3 477 aaKnown RBP eCLIP18.78■□□□□ 0.62e-6■□□□□ 10.3
RAB28-205ENST00000508274 RNF181Q9P0P0 153 aa18.78■□□□□ 0.6
RAB28-205ENST00000508274 KIF3CO14782 793 aa18.77■□□□□ 0.6
RAB28-205ENST00000508274 MYL6BP14649 208 aa18.77■□□□□ 0.6
RAB28-205ENST00000508274 PDE6BP35913 854 aa18.77■□□□□ 0.6
RAB28-205ENST00000508274 ST5P78524 1137 aa18.77■□□□□ 0.6
RAB28-205ENST00000508274 NBPF5PQ86XG9 351 aaPredicted RBP18.77■□□□□ 0.6
RAB28-205ENST00000508274 NIP7Q9Y221 180 aaKnown RBP eCLIP18.77■□□□□ 0.6
RAB28-205ENST00000508274 ARFGEF2Q9Y6D5 1785 aa18.77■□□□□ 0.6
RAB28-205ENST00000508274 SLX4Q8IY92 1834 aa18.77■□□□□ 0.59
RAB28-205ENST00000508274 PRELPP51888 382 aa18.76■□□□□ 0.59
RAB28-205ENST00000508274 LMOD3Q0VAK6 560 aa18.76■□□□□ 0.59
RAB28-205ENST00000508274 TTLL7Q6ZT98 887 aa18.76■□□□□ 0.59
RAB28-205ENST00000508274 RUNDC1Q96C34 613 aa18.76■□□□□ 0.59
RAB28-205ENST00000508274 FAM177BA6PVY3 158 aa18.76■□□□□ 0.59
RAB28-205ENST00000508274 TRIM35Q9UPQ4 493 aa18.76■□□□□ 0.59
RAB28-205ENST00000508274 TIAM2Q8IVF5 1701 aa18.75■□□□□ 0.59
RAB28-205ENST00000508274 FER1L6Q2WGJ9 1857 aa18.75■□□□□ 0.59
RAB28-205ENST00000508274 NMRK2Q9NPI5 230 aa18.75■□□□□ 0.59
RAB28-205ENST00000508274 ZNF219Q9P2Y4 722 aaPredicted RBP18.75■□□□□ 0.59
RAB28-205ENST00000508274 TNRC6CQ9HCJ0 1690 aaKnown RBP18.74■□□□□ 0.59
RAB28-205ENST00000508274 MAP3K15Q6ZN16 1313 aa18.74■□□□□ 0.59
RAB28-205ENST00000508274 NFKBIEO00221 500 aa18.74■□□□□ 0.59
RAB28-205ENST00000508274 SRGNP10124 158 aa18.74■□□□□ 0.59
RAB28-205ENST00000508274 PDZRN3Q9UPQ7 1066 aa18.74■□□□□ 0.59
RAB28-205ENST00000508274 RGL2O15211 777 aa18.73■□□□□ 0.59
RAB28-205ENST00000508274 C21orf2O43822 256 aa18.73■□□□□ 0.59
RAB28-205ENST00000508274 EIF2S2P20042 333 aaKnown RBP18.73■□□□□ 0.59
RAB28-205ENST00000508274 ZBTB3Q9H5J0 574 aa18.73■□□□□ 0.59
RAB28-205ENST00000508274 KRT24Q2M2I5 525 aa18.72■□□□□ 0.59
RAB28-205ENST00000508274 BABAM1Q9NWV8 329 aa18.72■□□□□ 0.59
RAB28-205ENST00000508274 ANXA1P04083 346 aa18.72■□□□□ 0.59
RAB28-205ENST00000508274 PDIA6Q15084 440 aa18.72■□□□□ 0.59
RAB28-205ENST00000508274 PROSER3Q2NL68 480 aa18.72■□□□□ 0.59
RAB28-205ENST00000508274 TPTE2Q6XPS3 522 aa18.72■□□□□ 0.59
RAB28-205ENST00000508274 KIF6Q6ZMV9 814 aa18.72■□□□□ 0.59
RAB28-205ENST00000508274 LRP10Q7Z4F1 713 aa18.72■□□□□ 0.59
RAB28-205ENST00000508274 LAS1LQ9Y4W2 734 aaKnown RBP18.72■□□□□ 0.59
RAB28-205ENST00000508274 ERBB4Q15303 1308 aa18.71■□□□□ 0.59
RAB28-205ENST00000508274 ERVV-1B6SEH8 477 aa18.71■□□□□ 0.59
RAB28-205ENST00000508274 STYK1Q6J9G0 422 aa18.71■□□□□ 0.59
RAB28-205ENST00000508274 PRPF40BQ6NWY9 871 aaKnown RBP18.71■□□□□ 0.59
RAB28-205ENST00000508274 NECTIN2Q92692 538 aa18.71■□□□□ 0.59
RAB28-205ENST00000508274 MASTLQ96GX5 879 aa18.71■□□□□ 0.59
RAB28-205ENST00000508274 ABCC12Q96J65 1359 aa18.71■□□□□ 0.59
RAB28-205ENST00000508274 DICER1Q9UPY3 1922 aaKnown RBP18.7■□□□□ 0.58
RAB28-205ENST00000508274 CHL1O00533 1208 aa18.7■□□□□ 0.58
RAB28-205ENST00000508274 LMNB1P20700 586 aa18.7■□□□□ 0.58
RAB28-205ENST00000508274 GPTP24298 496 aa18.7■□□□□ 0.58
RAB28-205ENST00000508274 UBN2Q6ZU65 1347 aa18.7■□□□□ 0.58
RAB28-205ENST00000508274 ZEB1P37275 1124 aaPredicted RBP18.69■□□□□ 0.58
RAB28-205ENST00000508274 NUTM1Q86Y26 1132 aa18.69■□□□□ 0.58
RAB28-205ENST00000508274 CNKSR1Q969H4 720 aa18.69■□□□□ 0.58
RAB28-205ENST00000508274 CCDC184Q52MB2 194 aa18.68■□□□□ 0.58
RAB28-205ENST00000508274 ANKRD36CQ5JPF3 1778 aa18.67■□□□□ 0.58
RAB28-205ENST00000508274 KLRG2A4D1S0 409 aaPredicted RBP18.67■□□□□ 0.58
RAB28-205ENST00000508274 APAF1O14727 1248 aa18.67■□□□□ 0.58
RAB28-205ENST00000508274 GTF2E1P29083 439 aaPredicted RBP18.67■□□□□ 0.58
RAB28-205ENST00000508274 ERFEQ4G0M1 354 aa18.67■□□□□ 0.58
RAB28-205ENST00000508274 GIGYF2Q6Y7W6 1299 aaKnown RBP18.67■□□□□ 0.58
RAB28-205ENST00000508274 KDM2BQ8NHM5 1336 aa18.66■□□□□ 0.58
RAB28-205ENST00000508274 NPR1P16066 1061 aa18.66■□□□□ 0.58
RAB28-205ENST00000508274 SUSD4Q5VX71 490 aa18.66■□□□□ 0.58
RAB28-205ENST00000508274 ZC3H4Q9UPT8 1303 aaKnown RBP18.66■□□□□ 0.58
RAB28-205ENST00000508274 ZNF34Q8IZ26 560 aa18.65■□□□□ 0.58
RAB28-205ENST00000508274 NYXQ9GZU5 481 aa18.65■□□□□ 0.58
RAB28-205ENST00000508274 TOMM70O94826 608 aa18.64■□□□□ 0.58
RAB28-205ENST00000508274 HSPA6P17066 643 aa18.64■□□□□ 0.58
RAB28-205ENST00000508274 OLFM4Q6UX06 510 aa18.64■□□□□ 0.58
RAB28-205ENST00000508274 C7orf43Q8WVR3 580 aa18.64■□□□□ 0.58
RAB28-205ENST00000508274 TAOK3Q9H2K8 898 aa18.64■□□□□ 0.58
RAB28-205ENST00000508274 RRAGCQ9HB90 399 aa18.64■□□□□ 0.58
RAB28-205ENST00000508274 IBTKQ9P2D0 1353 aaPredicted RBP18.64■□□□□ 0.57
RAB28-205ENST00000508274 NTSR2O95665 410 aa18.64■□□□□ 0.57
RAB28-205ENST00000508274 AIMP1Q12904 312 aaKnown RBP18.64■□□□□ 0.57
RAB28-205ENST00000508274 CFAP44Q96MT7 982 aa18.64■□□□□ 0.57
RAB28-205ENST00000508274 LTBP3Q9NS15 1303 aa18.63■□□□□ 0.57
RAB28-205ENST00000508274 COPS6Q7L5N1 327 aa18.63■□□□□ 0.57
RAB28-205ENST00000508274 XAGE3Q8WTP9 111 aa18.63■□□□□ 0.57
RAB28-205ENST00000508274 MBIPQ9NS73 344 aa18.63■□□□□ 0.57
RAB28-205ENST00000508274 CHPF2Q9P2E5 772 aa18.63■□□□□ 0.57
RAB28-205ENST00000508274 GLTPD2A6NH11 291 aa18.62■□□□□ 0.57
RAB28-205ENST00000508274 CRY2Q49AN0 593 aa18.62■□□□□ 0.57
RAB28-205ENST00000508274 CNKSR2Q8WXI2 1034 aa18.62■□□□□ 0.57
RAB28-205ENST00000508274 DDX21Q9NR30 783 aaKnown RBP eCLIP18.62■□□□□ 0.57
RAB28-205ENST00000508274 CCDC93Q567U6 631 aa18.61■□□□□ 0.57
RAB28-205ENST00000508274 SOGA3Q5TF21 947 aa18.61■□□□□ 0.57
RAB28-205ENST00000508274 HDGFL1Q5TGJ6 251 aa18.61■□□□□ 0.57
RAB28-205ENST00000508274 RIC1Q4ADV7 1423 aa18.61■□□□□ 0.57
RAB28-205ENST00000508274 ZNF316A6NFI3 1004 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms