RNA–Protein interactions for RNA: ENST00000508236.1

CCDC149-206, Transcript of coiled-coil domain containing 149, humanhuman

TSL 4

Gene CCDC149, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-206ENST00000508236 MARVELD3Q96A59 401 aa10.63□□□□□ -0.71
CCDC149-206ENST00000508236 NUP155O75694 1391 aa10.63□□□□□ -0.71
CCDC149-206ENST00000508236 PLEKHH2Q8IVE3 1493 aa10.62□□□□□ -0.71
CCDC149-206ENST00000508236 ARID4BQ4LE39 1312 aaPredicted RBP10.62□□□□□ -0.71
CCDC149-206ENST00000508236 C11orf95C9JLR9 678 aaPredicted RBP10.62□□□□□ -0.71
CCDC149-206ENST00000508236 TREHO43280 583 aa10.62□□□□□ -0.71
CCDC149-206ENST00000508236 ZPR1O75312 459 aa10.62□□□□□ -0.71
CCDC149-206ENST00000508236 HDLBPQ00341 1268 aaKnown RBP10.62□□□□□ -0.71
CCDC149-206ENST00000508236 TRMT44Q8IYL2 757 aaKnown RBP10.62□□□□□ -0.71
CCDC149-206ENST00000508236 SCG3Q8WXD2 468 aaKnown RBP10.62□□□□□ -0.71
CCDC149-206ENST00000508236 ABCC2Q92887 1545 aa10.62□□□□□ -0.71
CCDC149-206ENST00000508236 KIF15Q9NS87 1388 aa10.62□□□□□ -0.71
CCDC149-206ENST00000508236 FANCIQ9NVI1 1328 aa10.61□□□□□ -0.71
CCDC149-206ENST00000508236 KDM5CP41229 1560 aa10.61□□□□□ -0.71
CCDC149-206ENST00000508236 ST18O60284 1047 aa10.61□□□□□ -0.71
CCDC149-206ENST00000508236 MPSTP25325 297 aa10.61□□□□□ -0.71
CCDC149-206ENST00000508236 FMR1Q06787 632 aaKnown RBP eCLIP10.61□□□□□ -0.71
CCDC149-206ENST00000508236 BRPF3Q9ULD4 1205 aa10.61□□□□□ -0.71
CCDC149-206ENST00000508236 UNC13BO14795 1591 aa10.6□□□□□ -0.71
CCDC149-206ENST00000508236 KIF7Q2M1P5 1343 aa10.6□□□□□ -0.71
CCDC149-206ENST00000508236 TMEM229AB2RXF0 380 aa10.6□□□□□ -0.71
CCDC149-206ENST00000508236 HNRNPMP52272 730 aaKnown RBP eCLIP10.6□□□□□ -0.71
CCDC149-206ENST00000508236 RAB15P59190 212 aa10.6□□□□□ -0.71
CCDC149-206ENST00000508236 SLC6A16Q9GZN6 736 aa10.6□□□□□ -0.71
CCDC149-206ENST00000508236 RALGAPBQ86X10 1494 aa10.6□□□□□ -0.71
CCDC149-206ENST00000508236 PLXNC1O60486 1568 aa10.6□□□□□ -0.71
CCDC149-206ENST00000508236 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.59□□□□□ -0.71
CCDC149-206ENST00000508236 BCORL1Q5H9F3 1711 aa10.59□□□□□ -0.71
CCDC149-206ENST00000508236 SCTRP47872 440 aa10.59□□□□□ -0.71
CCDC149-206ENST00000508236 FGD1P98174 961 aa10.59□□□□□ -0.71
CCDC149-206ENST00000508236 C9orf131Q5VYM1 1079 aa10.59□□□□□ -0.71
CCDC149-206ENST00000508236 TMC1Q8TDI8 760 aa10.59□□□□□ -0.71
CCDC149-206ENST00000508236 VTI1AQ96AJ9 217 aa10.59□□□□□ -0.71
CCDC149-206ENST00000508236 CITED4Q96RK1 184 aa10.59□□□□□ -0.71
CCDC149-206ENST00000508236 PRKRIP1Q9H875 184 aaPredicted RBP10.59□□□□□ -0.71
CCDC149-206ENST00000508236 ATAD2Q6PL18 1390 aa10.59□□□□□ -0.71
CCDC149-206ENST00000508236 TTC37Q6PGP7 1564 aa10.59□□□□□ -0.71
CCDC149-206ENST00000508236 ARHGAP5Q13017 1502 aa10.58□□□□□ -0.72
CCDC149-206ENST00000508236 USP47Q96K76 1375 aa10.58□□□□□ -0.72
CCDC149-206ENST00000508236 BACH1O14867 736 aa10.58□□□□□ -0.72
CCDC149-206ENST00000508236 CANXP27824 592 aaKnown RBP10.58□□□□□ -0.72
CCDC149-206ENST00000508236 HNRNPUQ00839 825 aaKnown RBP eCLIP10.58□□□□□ -0.72
CCDC149-206ENST00000508236 XPCQ01831 940 aaPredicted RBP10.58□□□□□ -0.72
CCDC149-206ENST00000508236 TNS4Q8IZW8 715 aa10.58□□□□□ -0.72
CCDC149-206ENST00000508236 OTUD5Q96G74 571 aa10.58□□□□□ -0.72
CCDC149-206ENST00000508236 KCTD15Q96SI1 283 aaPredicted RBP10.58□□□□□ -0.72
CCDC149-206ENST00000508236 ESF1Q9H501 851 aaKnown RBP10.58□□□□□ -0.72
CCDC149-206ENST00000508236 FAM135AQ9P2D6 1515 aa10.58□□□□□ -0.72
CCDC149-206ENST00000508236 UHRF1BP1LA0JNW5 1464 aa10.57□□□□□ -0.72
CCDC149-206ENST00000508236 ROCK2O75116 1388 aaKnown RBP10.57□□□□□ -0.72
CCDC149-206ENST00000508236 LDHBP07195 334 aaKnown RBP10.57□□□□□ -0.72
CCDC149-206ENST00000508236 PLCB3Q01970 1234 aa10.57□□□□□ -0.72
CCDC149-206ENST00000508236 DSC3Q14574 896 aa10.57□□□□□ -0.72
CCDC149-206ENST00000508236 LDLRAD1Q5T700 205 aa10.57□□□□□ -0.72
CCDC149-206ENST00000508236 C16orf46Q6P387 395 aa10.57□□□□□ -0.72
CCDC149-206ENST00000508236 SAP130Q9H0E3 1048 aa10.57□□□□□ -0.72
CCDC149-206ENST00000508236 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.57□□□□□ -0.72
CCDC149-206ENST00000508236 SYCP2Q9BX26 1530 aa10.57□□□□□ -0.72
CCDC149-206ENST00000508236 IQGAP3Q86VI3 1631 aa10.56□□□□□ -0.72
CCDC149-206ENST00000508236 SMARCA5O60264 1052 aaPredicted RBP10.56□□□□□ -0.72
CCDC149-206ENST00000508236 PIK3R5Q8WYR1 880 aa10.56□□□□□ -0.72
CCDC149-206ENST00000508236 HS3ST6Q96QI5 342 aa10.56□□□□□ -0.72
CCDC149-206ENST00000508236 MRS2Q9HD23 443 aa10.56□□□□□ -0.72
CCDC149-206ENST00000508236 CLASP1Q7Z460 1538 aa10.56□□□□□ -0.72
CCDC149-206ENST00000508236 ZCCHC11Q5TAX3 1644 aaKnown RBP10.55□□□□□ -0.72
CCDC149-206ENST00000508236 PRPF40AO75400 957 aaKnown RBP10.55□□□□□ -0.72
CCDC149-206ENST00000508236 MAPK8P45983 427 aa10.55□□□□□ -0.72
CCDC149-206ENST00000508236 SCNN1DP51172 638 aa10.55□□□□□ -0.72
CCDC149-206ENST00000508236 GDF10P55107 478 aa10.55□□□□□ -0.72
CCDC149-206ENST00000508236 ALKBH2Q6NS38 261 aa10.55□□□□□ -0.72
CCDC149-206ENST00000508236 TMEM87AQ8NBN3 555 aa10.55□□□□□ -0.72
CCDC149-206ENST00000508236 SPATA32Q96LK8 384 aa10.55□□□□□ -0.72
CCDC149-206ENST00000508236 DMRTB1Q96MA1 342 aa10.55□□□□□ -0.72
CCDC149-206ENST00000508236 PRKD2Q9BZL6 878 aa10.55□□□□□ -0.72
CCDC149-206ENST00000508236 TSPAN10Q9H1Z9 355 aaPredicted RBP10.55□□□□□ -0.72
CCDC149-206ENST00000508236 PARP2Q9UGN5 583 aa10.55□□□□□ -0.72
CCDC149-206ENST00000508236 ERCC6L2Q5T890 1561 aa10.55□□□□□ -0.72
CCDC149-206ENST00000508236 DUOX2Q9NRD8 1548 aa10.54□□□□□ -0.72
CCDC149-206ENST00000508236 POTEB3A0JP26 581 aa10.54□□□□□ -0.72
CCDC149-206ENST00000508236 ERVH48-1M5A8F1 160 aa10.54□□□□□ -0.72
CCDC149-206ENST00000508236 WASLO00401 505 aaPredicted RBP10.54□□□□□ -0.72
CCDC149-206ENST00000508236 EIF1AXP47813 144 aaKnown RBP10.54□□□□□ -0.72
CCDC149-206ENST00000508236 ERVK-9P63128 1117 aa10.54□□□□□ -0.72
CCDC149-206ENST00000508236 SH3BP2P78314 561 aa10.54□□□□□ -0.72
CCDC149-206ENST00000508236 EHHADHQ08426 723 aa10.54□□□□□ -0.72
CCDC149-206ENST00000508236 AAMPQ13685 434 aa10.54□□□□□ -0.72
CCDC149-206ENST00000508236 POTEBQ6S5H4 581 aa10.54□□□□□ -0.72
CCDC149-206ENST00000508236 FAM161BQ96MY7 647 aa10.54□□□□□ -0.72
CCDC149-206ENST00000508236 MTRQ99707 1265 aa10.54□□□□□ -0.72
CCDC149-206ENST00000508236 DUSP9Q99956 384 aaKnown RBP10.54□□□□□ -0.72
CCDC149-206ENST00000508236 CCDC87Q9NVE4 849 aa10.54□□□□□ -0.72
CCDC149-206ENST00000508236 FZD6O60353 706 aa10.53□□□□□ -0.72
CCDC149-206ENST00000508236 EPHA4P54764 986 aa10.53□□□□□ -0.72
CCDC149-206ENST00000508236 RAD51AP2Q09MP3 1159 aa10.53□□□□□ -0.72
CCDC149-206ENST00000508236 INTS6LQ5JSJ4 861 aaKnown RBP10.53□□□□□ -0.72
CCDC149-206ENST00000508236 CC2D2BQ6DHV5 1058 aa10.53□□□□□ -0.72
CCDC149-206ENST00000508236 ANKRD13DQ6ZTN6 518 aa10.53□□□□□ -0.72
CCDC149-206ENST00000508236 FCF1Q9Y324 198 aaKnown RBP10.53□□□□□ -0.72
CCDC149-206ENST00000508236 LAMC1P11047 1609 aa10.53□□□□□ -0.72
CCDC149-206ENST00000508236 TRPM1Q7Z4N2 1603 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms