RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 NBPF15Q8N660 670 aa13.82□□□□□ -0.2
PROM1-207ENST00000508167 LRRC4BQ9NT99 713 aa13.82□□□□□ -0.2
PROM1-207ENST00000508167 ABCC4O15439 1325 aa13.82□□□□□ -0.2
PROM1-207ENST00000508167 ERBB4Q15303 1308 aa13.82□□□□□ -0.2
PROM1-207ENST00000508167 AAMPQ13685 434 aa13.82□□□□□ -0.2
PROM1-207ENST00000508167 ZBTB40Q9NUA8 1239 aa13.82□□□□□ -0.2
PROM1-207ENST00000508167 BRWD3Q6RI45 1802 aa13.82□□□□□ -0.2
PROM1-207ENST00000508167 IL6STP40189 918 aaPredicted RBP13.82□□□□□ -0.2
PROM1-207ENST00000508167 DNAAF4Q8WXU2 420 aa13.82□□□□□ -0.2
PROM1-207ENST00000508167 MYD88Q99836 296 aa13.82□□□□□ -0.2
PROM1-207ENST00000508167 BCL11AQ9H165 835 aa13.82□□□□□ -0.2
PROM1-207ENST00000508167 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.81□□□□□ -0.2
PROM1-207ENST00000508167 GPTP24298 496 aa13.81□□□□□ -0.2
PROM1-207ENST00000508167 RTL5Q5HYW3 569 aaPredicted RBP13.81□□□□□ -0.2
PROM1-207ENST00000508167 C9orf78Q9NZ63 289 aaPredicted RBP13.81□□□□□ -0.2
PROM1-207ENST00000508167 PTPRCP08575 1304 aa13.81□□□□□ -0.2
PROM1-207ENST00000508167 ATP5J2-PTCD1G3V325 749 aa13.81□□□□□ -0.2
PROM1-207ENST00000508167 ZNF652Q9Y2D9 606 aa13.81□□□□□ -0.2
PROM1-207ENST00000508167 SHANK3Q9BYB0 1731 aa13.81□□□□□ -0.2
PROM1-207ENST00000508167 IPO9Q96P70 1041 aaKnown RBP13.81□□□□□ -0.2
PROM1-207ENST00000508167 KSR2Q6VAB6 950 aa13.8□□□□□ -0.2
PROM1-207ENST00000508167 CACNA1FO60840 1977 aa13.8□□□□□ -0.2
PROM1-207ENST00000508167 RPS6KA4O75676 772 aa13.8□□□□□ -0.2
PROM1-207ENST00000508167 TMEM57Q8N5G2 664 aa13.8□□□□□ -0.2
PROM1-207ENST00000508167 SRCIN1Q9C0H9 1055 aa13.8□□□□□ -0.2
PROM1-207ENST00000508167 INTS5Q6P9B9 1019 aaKnown RBP13.79□□□□□ -0.2
PROM1-207ENST00000508167 ILDR2Q71H61 639 aa13.79□□□□□ -0.2
PROM1-207ENST00000508167 UPF1Q92900 1129 aaKnown RBP eCLIP13.79□□□□□ -0.2
PROM1-207ENST00000508167 TOGARAM1Q9Y4F4 1720 aa13.79□□□□□ -0.2
PROM1-207ENST00000508167 ITGB4P16144 1822 aa13.79□□□□□ -0.2
PROM1-207ENST00000508167 HDAC1Q13547 482 aaPredicted RBP13.79□□□□□ -0.2
PROM1-207ENST00000508167 PROM2Q8N271 834 aa13.79□□□□□ -0.2
PROM1-207ENST00000508167 PLBD2Q8NHP8 589 aa13.79□□□□□ -0.2
PROM1-207ENST00000508167 ATP10DQ9P241 1426 aa13.79□□□□□ -0.2
PROM1-207ENST00000508167 SEC24BO95487 1268 aa13.78□□□□□ -0.2
PROM1-207ENST00000508167 PDIA6Q15084 440 aa13.78□□□□□ -0.2
PROM1-207ENST00000508167 RC3H1Q5TC82 1133 aaKnown RBP13.78□□□□□ -0.2
PROM1-207ENST00000508167 CHMP4BQ9H444 224 aaKnown RBP13.78□□□□□ -0.2
PROM1-207ENST00000508167 CCT4P50991 539 aaKnown RBP13.78□□□□□ -0.2
PROM1-207ENST00000508167 ARHGAP45Q92619 1136 aa13.78□□□□□ -0.2
PROM1-207ENST00000508167 CNTNAP4Q9C0A0 1308 aa13.77□□□□□ -0.2
PROM1-207ENST00000508167 HSP90AB3PQ58FF7 597 aa13.77□□□□□ -0.2
PROM1-207ENST00000508167 USPL1Q5W0Q7 1092 aa13.77□□□□□ -0.2
PROM1-207ENST00000508167 ARHGEF1Q92888 912 aaKnown RBP13.77□□□□□ -0.21
PROM1-207ENST00000508167 CAMKK2Q96RR4 588 aa13.77□□□□□ -0.21
PROM1-207ENST00000508167 SRP68Q9UHB9 627 aaKnown RBP13.77□□□□□ -0.21
PROM1-207ENST00000508167 EIF5P55010 431 aaKnown RBP13.77□□□□□ -0.21
PROM1-207ENST00000508167 SIRT2Q8IXJ6 389 aa13.77□□□□□ -0.21
PROM1-207ENST00000508167 NIP7Q9Y221 180 aaKnown RBP eCLIP13.77□□□□□ -0.21
PROM1-207ENST00000508167 COL15A1P39059 1388 aa13.76□□□□□ -0.21
PROM1-207ENST00000508167 ZBTB7BO15156 539 aaPredicted RBP13.76□□□□□ -0.21
PROM1-207ENST00000508167 KCPQ6ZWJ8 1503 aa13.76□□□□□ -0.21
PROM1-207ENST00000508167 CWF19L2Q2TBE0 894 aaKnown RBP13.76□□□□□ -0.21
PROM1-207ENST00000508167 DDX19BQ9UMR2 479 aa13.76□□□□□ -0.21
PROM1-207ENST00000508167 CHMP3Q9Y3E7 222 aa13.76□□□□□ -0.21
PROM1-207ENST00000508167 FAM161AQ3B820 660 aa13.76□□□□□ -0.21
PROM1-207ENST00000508167 FLAD1Q8NFF5 587 aa13.76□□□□□ -0.21
PROM1-207ENST00000508167 MAP3K15Q6ZN16 1313 aa13.76□□□□□ -0.21
PROM1-207ENST00000508167 BTAF1O14981 1849 aa13.75□□□□□ -0.21
PROM1-207ENST00000508167 SMC5Q8IY18 1101 aa13.75□□□□□ -0.21
PROM1-207ENST00000508167 JARID2Q92833 1246 aaPredicted RBP13.75□□□□□ -0.21
PROM1-207ENST00000508167 SLC15A2Q16348 729 aa13.75□□□□□ -0.21
PROM1-207ENST00000508167 MSL1Q68DK7 614 aa13.75□□□□□ -0.21
PROM1-207ENST00000508167 SETDB2Q96T68 719 aa13.75□□□□□ -0.21
PROM1-207ENST00000508167 METTL22Q9BUU2 404 aaPredicted RBP13.75□□□□□ -0.21
PROM1-207ENST00000508167 C5P01031 1676 aa13.74□□□□□ -0.21
PROM1-207ENST00000508167 UBTFL1P0CB47 393 aaPredicted RBP13.74□□□□□ -0.21
PROM1-207ENST00000508167 TRMT112Q9UI30 125 aaKnown RBP13.74□□□□□ -0.21
PROM1-207ENST00000508167 SSFA2P28290 1259 aa13.74□□□□□ -0.21
PROM1-207ENST00000508167 HLFQ16534 295 aa13.74□□□□□ -0.21
PROM1-207ENST00000508167 ZNF827Q17R98 1081 aa13.74□□□□□ -0.21
PROM1-207ENST00000508167 KLHL34Q8N239 644 aa13.74□□□□□ -0.21
PROM1-207ENST00000508167 LINS1Q8NG48 757 aa13.74□□□□□ -0.21
PROM1-207ENST00000508167 PDZRN3Q9UPQ7 1066 aa13.74□□□□□ -0.21
PROM1-207ENST00000508167 NOP58Q9Y2X3 529 aaKnown RBP13.74□□□□□ -0.21
PROM1-207ENST00000508167 NHSQ6T4R5 1651 aa13.74□□□□□ -0.21
PROM1-207ENST00000508167 CWC25Q9NXE8 425 aaPredicted RBP13.74□□□□□ -0.21
PROM1-207ENST00000508167 HDAC5Q9UQL6 1122 aa13.73□□□□□ -0.21
PROM1-207ENST00000508167 ADRA2BP18089 450 aa13.73□□□□□ -0.21
PROM1-207ENST00000508167 GIGYF2Q6Y7W6 1299 aaKnown RBP13.73□□□□□ -0.21
PROM1-207ENST00000508167 NARFQ9UHQ1 456 aa13.73□□□□□ -0.21
PROM1-207ENST00000508167 PSDA5PKW4 1024 aaPredicted RBP13.73□□□□□ -0.21
PROM1-207ENST00000508167 TCIRG1Q13488 830 aa13.73□□□□□ -0.21
PROM1-207ENST00000508167 R3HDM1Q15032 1099 aaKnown RBP13.73□□□□□ -0.21
PROM1-207ENST00000508167 NBPF5PQ86XG9 351 aaPredicted RBP13.72□□□□□ -0.21
PROM1-207ENST00000508167 C1orf115Q9H7X2 142 aa13.72□□□□□ -0.21
PROM1-207ENST00000508167 UBE3BQ7Z3V4 1068 aa13.72□□□□□ -0.21
PROM1-207ENST00000508167 ANO8Q9HCE9 1232 aaPredicted RBP13.72□□□□□ -0.21
PROM1-207ENST00000508167 PPP1R1BQ9UD71 204 aaPredicted RBP13.72□□□□□ -0.21
PROM1-207ENST00000508167 GNAI3P08754 354 aa13.72□□□□□ -0.21
PROM1-207ENST00000508167 ZBTB47Q9UFB7 747 aaPredicted RBP13.72□□□□□ -0.21
PROM1-207ENST00000508167 EP400Q96L91 3159 aa13.72□□□□□ -0.21
PROM1-207ENST00000508167 ERVV-1B6SEH8 477 aa13.71□□□□□ -0.21
PROM1-207ENST00000508167 PPP1R42Q7Z4L9 355 aa13.71□□□□□ -0.21
PROM1-207ENST00000508167 COL23A1Q86Y22 540 aaPredicted RBP13.71□□□□□ -0.22
PROM1-207ENST00000508167 ALDH1L1O75891 902 aa13.7□□□□□ -0.22
PROM1-207ENST00000508167 NLGN1Q8N2Q7 840 aa13.7□□□□□ -0.22
PROM1-207ENST00000508167 FAM89AQ96GI7 184 aa13.7□□□□□ -0.22
PROM1-207ENST00000508167 CCDC85AQ96PX6 553 aaPredicted RBP13.7□□□□□ -0.22
PROM1-207ENST00000508167 MEIS3Q99687 375 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms