RNA–Protein interactions for RNA: ENST00000507638.1

VEGFC-201, Transcript of vascular endothelial growth factor C, humanhuman

TSL 3

Gene VEGFC, Length 759 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-201ENST00000507638 ARHGEF28Q8N1W1 1705 aaKnown RBP8.46□□□□□ -1.06
VEGFC-201ENST00000507638 TECPR2O15040 1411 aa8.46□□□□□ -1.06
VEGFC-201ENST00000507638 CEP162Q5TB80 1403 aa8.46□□□□□ -1.06
VEGFC-201ENST00000507638 ERBINQ96RT1 1412 aa8.46□□□□□ -1.06
VEGFC-201ENST00000507638 ZBTB24O43167 697 aaPredicted RBP8.45□□□□□ -1.06
VEGFC-201ENST00000507638 GUCA2AQ02747 115 aa8.45□□□□□ -1.06
VEGFC-201ENST00000507638 TRIM26Q12899 539 aaPredicted RBP8.45□□□□□ -1.06
VEGFC-201ENST00000507638 PTPRNQ16849 979 aa8.45□□□□□ -1.06
VEGFC-201ENST00000507638 HLA-CQ95604 372 aa8.45□□□□□ -1.06
VEGFC-201ENST00000507638 PCMTD1Q96MG8 357 aaPredicted RBP8.45□□□□□ -1.06
VEGFC-201ENST00000507638 PLEKHG3A1L390 1219 aa8.44□□□□□ -1.06
VEGFC-201ENST00000507638 LILRB3O75022 631 aa8.44□□□□□ -1.06
VEGFC-201ENST00000507638 CD2BP2O95400 341 aaKnown RBP8.44□□□□□ -1.06
VEGFC-201ENST00000507638 EVA1CP58658 441 aa8.44□□□□□ -1.06
VEGFC-201ENST00000507638 LAPTM4AQ15012 233 aa8.44□□□□□ -1.06
VEGFC-201ENST00000507638 HELBQ8NG08 1087 aaPredicted RBP8.44□□□□□ -1.06
VEGFC-201ENST00000507638 PRR7Q8TB68 274 aa8.44□□□□□ -1.06
VEGFC-201ENST00000507638 SLC16A10Q8TF71 515 aa8.44□□□□□ -1.06
VEGFC-201ENST00000507638 PRKD2Q9BZL6 878 aa8.44□□□□□ -1.06
VEGFC-201ENST00000507638 PRDM11Q9NQV5 511 aa8.44□□□□□ -1.06
VEGFC-201ENST00000507638 PDE4DIPQ5VU43 2346 aa8.44□□□□□ -1.06
VEGFC-201ENST00000507638 ARHGEF10O15013 1369 aa8.44□□□□□ -1.06
VEGFC-201ENST00000507638 SLC19A1P41440 591 aa8.43□□□□□ -1.06
VEGFC-201ENST00000507638 CHRNA2Q15822 529 aa8.43□□□□□ -1.06
VEGFC-201ENST00000507638 ZNF326Q5BKZ1 582 aaKnown RBP8.43□□□□□ -1.06
VEGFC-201ENST00000507638 FCF1Q9Y324 198 aaKnown RBP8.43□□□□□ -1.06
VEGFC-201ENST00000507638 DHX57Q6P158 1386 aaKnown RBP8.43□□□□□ -1.06
VEGFC-201ENST00000507638 TCP11L2Q8N4U5 519 aa8.42□□□□□ -1.06
VEGFC-201ENST00000507638 LIMD1Q9UGP4 676 aa8.42□□□□□ -1.06
VEGFC-201ENST00000507638 SBNO1A3KN83 1393 aa8.42□□□□□ -1.06
VEGFC-201ENST00000507638 HFM1A2PYH4 1435 aa8.41□□□□□ -1.06
VEGFC-201ENST00000507638 CCNYL3P0C7X3 344 aa8.41□□□□□ -1.06
VEGFC-201ENST00000507638 PPP2R2DQ66LE6 453 aa8.41□□□□□ -1.06
VEGFC-201ENST00000507638 NUDT12Q9BQG2 462 aa8.41□□□□□ -1.06
VEGFC-201ENST00000507638 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.41□□□□□ -1.06
VEGFC-201ENST00000507638 POLR3EQ9NVU0 708 aa8.41□□□□□ -1.06
VEGFC-201ENST00000507638 PCDHB15Q9Y5E8 787 aa8.41□□□□□ -1.06
VEGFC-201ENST00000507638 OVOS2A0A0G2JMS6 1433 aa8.4□□□□□ -1.06
VEGFC-201ENST00000507638 OVOS2A0A0J9YW53 1432 aa8.4□□□□□ -1.06
VEGFC-201ENST00000507638 OVOS2Q6IE36 1432 aa8.4□□□□□ -1.06
VEGFC-201ENST00000507638 TNRC18O15417 2968 aaPredicted RBP8.4□□□□□ -1.06
VEGFC-201ENST00000507638 CTCFP49711 727 aaPredicted RBP8.4□□□□□ -1.06
VEGFC-201ENST00000507638 ZNF827Q17R98 1081 aa8.4□□□□□ -1.06
VEGFC-201ENST00000507638 LYPD8Q6UX82 237 aa8.4□□□□□ -1.06
VEGFC-201ENST00000507638 ZNF598Q86UK7 904 aaKnown RBP8.4□□□□□ -1.06
VEGFC-201ENST00000507638 PRDM9Q9NQV7 894 aa8.4□□□□□ -1.06
VEGFC-201ENST00000507638 PRKCSHP14314 528 aaPredicted RBP8.39□□□□□ -1.07
VEGFC-201ENST00000507638 LBX1P52954 281 aa8.39□□□□□ -1.07
VEGFC-201ENST00000507638 LARP1Q6PKG0 1096 aaKnown RBP8.39□□□□□ -1.07
VEGFC-201ENST00000507638 IL27Q8NEV9 243 aa8.39□□□□□ -1.07
VEGFC-201ENST00000507638 SYMPKQ92797 1274 aaKnown RBP8.39□□□□□ -1.07
VEGFC-201ENST00000507638 RGPD8O14715 1765 aaPredicted RBP8.39□□□□□ -1.07
VEGFC-201ENST00000507638 CDC42BPGQ6DT37 1551 aa8.39□□□□□ -1.07
VEGFC-201ENST00000507638 NAIPQ13075 1403 aa8.38□□□□□ -1.07
VEGFC-201ENST00000507638 COL24A1Q17RW2 1714 aa8.38□□□□□ -1.07
VEGFC-201ENST00000507638 PEAK1Q9H792 1746 aa8.38□□□□□ -1.07
VEGFC-201ENST00000507638 KIF1AQ12756 1690 aa8.38□□□□□ -1.07
VEGFC-201ENST00000507638 CSPP1Q1MSJ5 1256 aa8.38□□□□□ -1.07
VEGFC-201ENST00000507638 SPRYD7Q5W111 196 aa8.38□□□□□ -1.07
VEGFC-201ENST00000507638 WAPLQ7Z5K2 1190 aa8.38□□□□□ -1.07
VEGFC-201ENST00000507638 EVA1BQ9NVM1 165 aa8.38□□□□□ -1.07
VEGFC-201ENST00000507638 TULP4Q9NRJ4 1543 aa8.38□□□□□ -1.07
VEGFC-201ENST00000507638 TOPAZ1Q8N9V7 1692 aa8.37□□□□□ -1.07
VEGFC-201ENST00000507638 DLL1O00548 723 aa8.37□□□□□ -1.07
VEGFC-201ENST00000507638 PPEF1O14829 653 aaPredicted RBP8.37□□□□□ -1.07
VEGFC-201ENST00000507638 WNT7BP56706 349 aa8.37□□□□□ -1.07
VEGFC-201ENST00000507638 TMEM259Q4ZIN3 620 aa8.37□□□□□ -1.07
VEGFC-201ENST00000507638 ARMC2Q8NEN0 867 aa8.37□□□□□ -1.07
VEGFC-201ENST00000507638 THRAP3Q9Y2W1 955 aaKnown RBP8.37□□□□□ -1.07
VEGFC-201ENST00000507638 ZC3H6P61129 1189 aaKnown RBP8.36□□□□□ -1.07
VEGFC-201ENST00000507638 PRR20EP86478 221 aa8.36□□□□□ -1.07
VEGFC-201ENST00000507638 PRR20CP86479 221 aa8.36□□□□□ -1.07
VEGFC-201ENST00000507638 PRR20DP86480 221 aa8.36□□□□□ -1.07
VEGFC-201ENST00000507638 PRR20BP86481 221 aa8.36□□□□□ -1.07
VEGFC-201ENST00000507638 PRR20AP86496 221 aa8.36□□□□□ -1.07
VEGFC-201ENST00000507638 DDB1Q16531 1140 aa8.36□□□□□ -1.07
VEGFC-201ENST00000507638 QPCTQ16769 361 aa8.36□□□□□ -1.07
VEGFC-201ENST00000507638 CCDC24Q8N4L8 307 aa8.36□□□□□ -1.07
VEGFC-201ENST00000507638 PNMA1Q8ND90 353 aa8.36□□□□□ -1.07
VEGFC-201ENST00000507638 SMC1BQ8NDV3 1235 aa8.36□□□□□ -1.07
VEGFC-201ENST00000507638 RRAGCQ9HB90 399 aa8.36□□□□□ -1.07
VEGFC-201ENST00000507638 CHIC2Q9UKJ5 165 aa8.36□□□□□ -1.07
VEGFC-201ENST00000507638 CD2APQ9Y5K6 639 aa8.36□□□□□ -1.07
VEGFC-201ENST00000507638 KIAA0232Q92628 1395 aa8.35□□□□□ -1.07
VEGFC-201ENST00000507638 CFAP99D6REC4 459 aa8.35□□□□□ -1.07
VEGFC-201ENST00000507638 KCNH2Q12809 1159 aa8.35□□□□□ -1.07
VEGFC-201ENST00000507638 MARCH10Q8NA82 808 aaPredicted RBP8.35□□□□□ -1.07
VEGFC-201ENST00000507638 AIDAQ96BJ3 306 aa8.35□□□□□ -1.07
VEGFC-201ENST00000507638 IRX2Q9BZI1 471 aaPredicted RBP8.35□□□□□ -1.07
VEGFC-201ENST00000507638 MKRN1Q9UHC7 482 aaKnown RBP8.35□□□□□ -1.07
VEGFC-201ENST00000507638 PRAG1Q86YV5 1406 aa8.35□□□□□ -1.07
VEGFC-201ENST00000507638 PARP4Q9UKK3 1724 aaKnown RBP8.34□□□□□ -1.07
VEGFC-201ENST00000507638 PNPLA7Q6ZV29 1317 aa8.34□□□□□ -1.07
VEGFC-201ENST00000507638 APBB1O00213 710 aa8.34□□□□□ -1.07
VEGFC-201ENST00000507638 TRIM32Q13049 653 aa8.34□□□□□ -1.07
VEGFC-201ENST00000507638 ZNF697Q5TEC3 545 aa8.34□□□□□ -1.07
VEGFC-201ENST00000507638 LIAT1Q6ZQX7 453 aa8.34□□□□□ -1.07
VEGFC-201ENST00000507638 LRRC4BQ9NT99 713 aa8.34□□□□□ -1.07
VEGFC-201ENST00000507638 SSH2Q76I76 1423 aa8.34□□□□□ -1.07
VEGFC-201ENST00000507638 KAT6BQ8WYB5 2073 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms