RNA–Protein interactions for RNA: ENST00000507488.6

ATP2C1-212, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATP2C1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-212ENST00000507488 SASH1O94885 1247 aa5.66□□□□□ -1.5
ATP2C1-212ENST00000507488 ATP8B2P98198 1209 aa5.66□□□□□ -1.5
ATP2C1-212ENST00000507488 MCM4P33991 863 aa5.66□□□□□ -1.5
ATP2C1-212ENST00000507488 PLCB2Q00722 1185 aa5.66□□□□□ -1.5
ATP2C1-212ENST00000507488 HSP90AB3PQ58FF7 597 aa5.66□□□□□ -1.5
ATP2C1-212ENST00000507488 USP26Q9BXU7 913 aa5.66□□□□□ -1.5
ATP2C1-212ENST00000507488 SRCIN1Q9C0H9 1055 aa5.66□□□□□ -1.5
ATP2C1-212ENST00000507488 COL18A1P39060 1754 aa5.66□□□□□ -1.5
ATP2C1-212ENST00000507488 SSFA2P28290 1259 aa5.66□□□□□ -1.5
ATP2C1-212ENST00000507488 UBE3BQ7Z3V4 1068 aa5.66□□□□□ -1.5
ATP2C1-212ENST00000507488 RASEFQ8IZ41 740 aa5.66□□□□□ -1.5
ATP2C1-212ENST00000507488 PI4K2BQ8TCG2 481 aa5.66□□□□□ -1.5
ATP2C1-212ENST00000507488 SNX21Q969T3 373 aa5.66□□□□□ -1.5
ATP2C1-212ENST00000507488 KIF24Q5T7B8 1368 aa5.66□□□□□ -1.5
ATP2C1-212ENST00000507488 CCDC24Q8N4L8 307 aa5.65□□□□□ -1.5
ATP2C1-212ENST00000507488 EAF2Q96CJ1 260 aaPredicted RBP5.65□□□□□ -1.5
ATP2C1-212ENST00000507488 FAM227BQ96M60 508 aa5.65□□□□□ -1.5
ATP2C1-212ENST00000507488 SEC62Q99442 399 aaKnown RBP5.65□□□□□ -1.5
ATP2C1-212ENST00000507488 TNS3Q68CZ2 1445 aa5.65□□□□□ -1.5
ATP2C1-212ENST00000507488 LAMA3Q16787 3333 aa5.65□□□□□ -1.5
ATP2C1-212ENST00000507488 KCNQ2O43526 872 aa5.65□□□□□ -1.51
ATP2C1-212ENST00000507488 PTH1RQ03431 593 aa5.65□□□□□ -1.51
ATP2C1-212ENST00000507488 L1TD1Q5T7N2 865 aaKnown RBP5.65□□□□□ -1.51
ATP2C1-212ENST00000507488 CWC27Q6UX04 472 aaKnown RBP5.65□□□□□ -1.51
ATP2C1-212ENST00000507488 CADPS2Q86UW7 1296 aa5.65□□□□□ -1.51
ATP2C1-212ENST00000507488 NKX2-3Q8TAU0 364 aa5.65□□□□□ -1.51
ATP2C1-212ENST00000507488 RHPN1Q8TCX5 695 aa5.65□□□□□ -1.51
ATP2C1-212ENST00000507488 PANK2Q9BZ23 570 aa5.65□□□□□ -1.51
ATP2C1-212ENST00000507488 PUS3Q9BZE2 481 aaKnown RBP5.65□□□□□ -1.51
ATP2C1-212ENST00000507488 IBTKQ9P2D0 1353 aaPredicted RBP5.65□□□□□ -1.51
ATP2C1-212ENST00000507488 MX1P20591 662 aa5.65□□□□□ -1.51
ATP2C1-212ENST00000507488 GPTP24298 496 aa5.65□□□□□ -1.51
ATP2C1-212ENST00000507488 CCT4P50991 539 aaKnown RBP5.65□□□□□ -1.51
ATP2C1-212ENST00000507488 HLFQ16534 295 aa5.65□□□□□ -1.51
ATP2C1-212ENST00000507488 PI16Q6UXB8 463 aa5.65□□□□□ -1.51
ATP2C1-212ENST00000507488 CCDC129Q6ZRS4 1044 aa5.65□□□□□ -1.51
ATP2C1-212ENST00000507488 AMIGO3Q86WK7 504 aa5.65□□□□□ -1.51
ATP2C1-212ENST00000507488 LRRCC1Q9C099 1032 aa5.65□□□□□ -1.51
ATP2C1-212ENST00000507488 NSFL1CQ9UNZ2 370 aaKnown RBP5.65□□□□□ -1.51
ATP2C1-212ENST00000507488 LARGE1O95461 756 aa5.64□□□□□ -1.51
ATP2C1-212ENST00000507488 TATP17735 454 aaPredicted RBP5.64□□□□□ -1.51
ATP2C1-212ENST00000507488 CABP4P57796 275 aa5.64□□□□□ -1.51
ATP2C1-212ENST00000507488 ADCK5Q3MIX3 580 aa5.64□□□□□ -1.51
ATP2C1-212ENST00000507488 RIC3Q7Z5B4 369 aa5.64□□□□□ -1.51
ATP2C1-212ENST00000507488 PIGBQ92521 554 aa5.64□□□□□ -1.51
ATP2C1-212ENST00000507488 BOLA2Q9H3K6 86 aa5.64□□□□□ -1.51
ATP2C1-212ENST00000507488 C9orf78Q9NZ63 289 aaPredicted RBP5.64□□□□□ -1.51
ATP2C1-212ENST00000507488 HEG1Q9ULI3 1381 aa5.64□□□□□ -1.51
ATP2C1-212ENST00000507488 KDM3BQ7LBC6 1761 aa5.64□□□□□ -1.51
ATP2C1-212ENST00000507488 CEP350Q5VT06 3117 aa5.64□□□□□ -1.51
ATP2C1-212ENST00000507488 HSP90AB1P08238 724 aaKnown RBP5.64□□□□□ -1.51
ATP2C1-212ENST00000507488 DDIT3P35638 169 aa5.64□□□□□ -1.51
ATP2C1-212ENST00000507488 COL15A1P39059 1388 aa5.64□□□□□ -1.51
ATP2C1-212ENST00000507488 LRRC24Q50LG9 513 aa5.64□□□□□ -1.51
ATP2C1-212ENST00000507488 RPAP2Q8IXW5 612 aaPredicted RBP5.64□□□□□ -1.51
ATP2C1-212ENST00000507488 SSH3Q8TE77 659 aa5.64□□□□□ -1.51
ATP2C1-212ENST00000507488 PHRF1Q9P1Y6 1649 aaKnown RBP5.64□□□□□ -1.51
ATP2C1-212ENST00000507488 NCOA3Q9Y6Q9 1424 aa5.64□□□□□ -1.51
ATP2C1-212ENST00000507488 NEURL1BA8MQ27 555 aa5.63□□□□□ -1.51
ATP2C1-212ENST00000507488 CDC45O75419 566 aa5.63□□□□□ -1.51
ATP2C1-212ENST00000507488 DNAJC10Q8IXB1 793 aa5.63□□□□□ -1.51
ATP2C1-212ENST00000507488 GDPD2Q9HCC8 539 aa5.63□□□□□ -1.51
ATP2C1-212ENST00000507488 ANO2Q9NQ90 1003 aa5.63□□□□□ -1.51
ATP2C1-212ENST00000507488 CHMP3Q9Y3E7 222 aa5.63□□□□□ -1.51
ATP2C1-212ENST00000507488 TRAK2O60296 914 aa5.63□□□□□ -1.51
ATP2C1-212ENST00000507488 CHMLP26374 656 aa5.63□□□□□ -1.51
ATP2C1-212ENST00000507488 EVA1CP58658 441 aa5.63□□□□□ -1.51
ATP2C1-212ENST00000507488 TIMM10P62072 90 aa5.63□□□□□ -1.51
ATP2C1-212ENST00000507488 POLA2Q14181 598 aa5.63□□□□□ -1.51
ATP2C1-212ENST00000507488 TNPO1Q92973 898 aaKnown RBP5.63□□□□□ -1.51
ATP2C1-212ENST00000507488 FAM89AQ96GI7 184 aa5.63□□□□□ -1.51
ATP2C1-212ENST00000507488 DBF4Q9UBU7 674 aaPredicted RBP5.63□□□□□ -1.51
ATP2C1-212ENST00000507488 ZDHHC9Q9Y397 364 aa5.63□□□□□ -1.51
ATP2C1-212ENST00000507488 CRYBG1Q9Y4K1 1723 aa5.63□□□□□ -1.51
ATP2C1-212ENST00000507488 GLI3P10071 1580 aa5.63□□□□□ -1.51
ATP2C1-212ENST00000507488 COL5A2P05997 1499 aaPredicted RBP5.63□□□□□ -1.51
ATP2C1-212ENST00000507488 SOS2Q07890 1332 aaPredicted RBP5.63□□□□□ -1.51
ATP2C1-212ENST00000507488 GOLGA6L3A6NEY3 463 aa5.63□□□□□ -1.51
ATP2C1-212ENST00000507488 DDX11L8A8MPP1 907 aa5.63□□□□□ -1.51
ATP2C1-212ENST00000507488 HTATSF1O43719 755 aaKnown RBP5.63□□□□□ -1.51
ATP2C1-212ENST00000507488 KSR2Q6VAB6 950 aa5.63□□□□□ -1.51
ATP2C1-212ENST00000507488 ZNF589Q86UQ0 364 aaPredicted RBP5.63□□□□□ -1.51
ATP2C1-212ENST00000507488 IFNL2Q8IZJ0 200 aa5.63□□□□□ -1.51
ATP2C1-212ENST00000507488 NCAPD2Q15021 1401 aa5.63□□□□□ -1.51
ATP2C1-212ENST00000507488 LMO7Q8WWI1 1683 aa5.62□□□□□ -1.51
ATP2C1-212ENST00000507488 EIF5BO60841 1220 aaKnown RBP5.62□□□□□ -1.51
ATP2C1-212ENST00000507488 TFCP2Q12800 502 aa5.62□□□□□ -1.51
ATP2C1-212ENST00000507488 OS9Q13438 667 aaPredicted RBP5.62□□□□□ -1.51
ATP2C1-212ENST00000507488 ZCRB1Q8TBF4 217 aaKnown RBP5.62□□□□□ -1.51
ATP2C1-212ENST00000507488 CIZ1Q9ULV3 898 aaPredicted RBP5.62□□□□□ -1.51
ATP2C1-212ENST00000507488 COL4A1P02462 1669 aa5.62□□□□□ -1.51
ATP2C1-212ENST00000507488 GRM8O00222 908 aa5.62□□□□□ -1.51
ATP2C1-212ENST00000507488 GCKRQ14397 625 aa5.62□□□□□ -1.51
ATP2C1-212ENST00000507488 AMOTQ4VCS5 1084 aa5.62□□□□□ -1.51
ATP2C1-212ENST00000507488 AACSQ86V21 672 aa5.62□□□□□ -1.51
ATP2C1-212ENST00000507488 FAM43AQ8N2R8 423 aa5.62□□□□□ -1.51
ATP2C1-212ENST00000507488 DENND2AQ9ULE3 1009 aa5.62□□□□□ -1.51
ATP2C1-212ENST00000507488 TBC1D2BQ9UPU7 963 aa5.62□□□□□ -1.51
ATP2C1-212ENST00000507488 USP54Q70EL1 1684 aa5.62□□□□□ -1.51
ATP2C1-212ENST00000507488 WDR17Q8IZU2 1322 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms