RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-222ENST00000507459 KIAA1551Q9HCM1 1747 aa18.42■□□□□ 0.54
CCHCR1-222ENST00000507459 GNAI1P63096 354 aa18.41■□□□□ 0.54
CCHCR1-222ENST00000507459 IFT57Q9NWB7 429 aa18.41■□□□□ 0.54
CCHCR1-222ENST00000507459 NIP7Q9Y221 180 aaKnown RBP eCLIP18.41■□□□□ 0.54
CCHCR1-222ENST00000507459 SALL2Q9Y467 1007 aaPredicted RBP18.41■□□□□ 0.54
CCHCR1-222ENST00000507459 ERBB4Q15303 1308 aa18.41■□□□□ 0.54
CCHCR1-222ENST00000507459 BCORQ6W2J9 1755 aa18.4■□□□□ 0.54
CCHCR1-222ENST00000507459 FAM177BA6PVY3 158 aa18.4■□□□□ 0.54
CCHCR1-222ENST00000507459 ZNF853P0CG23 659 aa18.4■□□□□ 0.54
CCHCR1-222ENST00000507459 PDIA6Q15084 440 aa18.4■□□□□ 0.54
CCHCR1-222ENST00000507459 PROSER3Q2NL68 480 aa18.4■□□□□ 0.54
CCHCR1-222ENST00000507459 PRR5LQ6MZQ0 368 aa18.4■□□□□ 0.54
CCHCR1-222ENST00000507459 CNBD1Q8NA66 436 aa18.4■□□□□ 0.54
CCHCR1-222ENST00000507459 ZBTB3Q9H5J0 574 aa18.4■□□□□ 0.54
CCHCR1-222ENST00000507459 NRXN2Q9P2S2 1712 aa18.4■□□□□ 0.54
CCHCR1-222ENST00000507459 DALRD3Q5D0E6 543 aaKnown RBP18.39■□□□□ 0.53
CCHCR1-222ENST00000507459 NBPF5PQ86XG9 351 aaPredicted RBP18.39■□□□□ 0.53
CCHCR1-222ENST00000507459 C2CD5Q86YS7 1000 aa18.39■□□□□ 0.53
CCHCR1-222ENST00000507459 MAP3K15Q6ZN16 1313 aa18.39■□□□□ 0.53
CCHCR1-222ENST00000507459 ERVV-1B6SEH8 477 aa18.38■□□□□ 0.53
CCHCR1-222ENST00000507459 ST5P78524 1137 aa18.38■□□□□ 0.53
CCHCR1-222ENST00000507459 AIMP1Q12904 312 aaKnown RBP18.38■□□□□ 0.53
CCHCR1-222ENST00000507459 DUSP27Q5VZP5 1158 aa18.38■□□□□ 0.53
CCHCR1-222ENST00000507459 H0YIN7 160 aa18.37■□□□□ 0.53
CCHCR1-222ENST00000507459 ELL2O00472 640 aaPredicted RBP18.37■□□□□ 0.53
CCHCR1-222ENST00000507459 HDGFL1Q5TGJ6 251 aa18.37■□□□□ 0.53
CCHCR1-222ENST00000507459 ARHGAP27Q6ZUM4 889 aa18.37■□□□□ 0.53
CCHCR1-222ENST00000507459 WWC1Q8IX03 1113 aa18.37■□□□□ 0.53
CCHCR1-222ENST00000507459 BRIP1Q9BX63 1249 aa18.37■□□□□ 0.53
CCHCR1-222ENST00000507459 RGL2O15211 777 aa18.36■□□□□ 0.53
CCHCR1-222ENST00000507459 GPTP24298 496 aa18.36■□□□□ 0.53
CCHCR1-222ENST00000507459 CCDC27Q2M243 656 aa18.36■□□□□ 0.53
CCHCR1-222ENST00000507459 LRP10Q7Z4F1 713 aa18.36■□□□□ 0.53
CCHCR1-222ENST00000507459 CHPF2Q9P2E5 772 aa18.36■□□□□ 0.53
CCHCR1-222ENST00000507459 HOXB7P09629 217 aa18.35■□□□□ 0.53
CCHCR1-222ENST00000507459 PDE6BP35913 854 aa18.35■□□□□ 0.53
CCHCR1-222ENST00000507459 TPTE2Q6XPS3 522 aa18.35■□□□□ 0.53
CCHCR1-222ENST00000507459 COPS6Q7L5N1 327 aa18.35■□□□□ 0.53
CCHCR1-222ENST00000507459 ZNF784Q8NCA9 323 aaPredicted RBP18.35■□□□□ 0.53
CCHCR1-222ENST00000507459 XAGE3Q8WTP9 111 aa18.35■□□□□ 0.53
CCHCR1-222ENST00000507459 ZNF622Q969S3 477 aaKnown RBP eCLIP18.35■□□□□ 0.53
CCHCR1-222ENST00000507459 DDX21Q9NR30 783 aaKnown RBP eCLIP18.35■□□□□ 0.53
CCHCR1-222ENST00000507459 GTF2E1P29083 439 aaPredicted RBP18.34■□□□□ 0.53
CCHCR1-222ENST00000507459 TSR2Q969E8 191 aaKnown RBP18.34■□□□□ 0.53
CCHCR1-222ENST00000507459 BRCA1P38398 1863 aaKnown RBP18.34■□□□□ 0.53
CCHCR1-222ENST00000507459 GIGYF2Q6Y7W6 1299 aaKnown RBP18.33■□□□□ 0.52
CCHCR1-222ENST00000507459 TTLL6Q8N841 843 aa18.33■□□□□ 0.52
CCHCR1-222ENST00000507459 C8orf58Q8NAV2 365 aa18.33■□□□□ 0.52
CCHCR1-222ENST00000507459 NUP98P52948 1817 aa18.33■□□□□ 0.52
CCHCR1-222ENST00000507459 DBF4Q9UBU7 674 aaPredicted RBP18.32■□□□□ 0.52
CCHCR1-222ENST00000507459 PDZRN3Q9UPQ7 1066 aa18.32■□□□□ 0.52
CCHCR1-222ENST00000507459 ANKRD31Q8N7Z5 1873 aa18.32■□□□□ 0.52
CCHCR1-222ENST00000507459 NUTM1Q86Y26 1132 aa18.31■□□□□ 0.52
CCHCR1-222ENST00000507459 UBN2Q6ZU65 1347 aa18.3■□□□□ 0.52
CCHCR1-222ENST00000507459 NCBP3Q53F19 620 aaKnown RBP18.3■□□□□ 0.52
CCHCR1-222ENST00000507459 SUSD4Q5VX71 490 aa18.3■□□□□ 0.52
CCHCR1-222ENST00000507459 ZNF34Q8IZ26 560 aa18.3■□□□□ 0.52
CCHCR1-222ENST00000507459 NYXQ9GZU5 481 aa18.3■□□□□ 0.52
CCHCR1-222ENST00000507459 ZNF219Q9P2Y4 722 aaPredicted RBP18.3■□□□□ 0.52
CCHCR1-222ENST00000507459 ATP10DQ9P241 1426 aa18.3■□□□□ 0.52
CCHCR1-222ENST00000507459 ERFEQ4G0M1 354 aa18.29■□□□□ 0.52
CCHCR1-222ENST00000507459 TSPYL6Q8N831 410 aa18.29■□□□□ 0.52
CCHCR1-222ENST00000507459 HYPKQ9NX55 129 aa18.29■□□□□ 0.52
CCHCR1-222ENST00000507459 ARFGEF1Q9Y6D6 1849 aa18.28■□□□□ 0.52
CCHCR1-222ENST00000507459 SRGNP10124 158 aa18.28■□□□□ 0.52
CCHCR1-222ENST00000507459 MASTLQ96GX5 879 aa18.28■□□□□ 0.52
CCHCR1-222ENST00000507459 IL16Q14005 1332 aa18.27■□□□□ 0.52
CCHCR1-222ENST00000507459 HSP90AB3PQ58FF7 597 aa18.27■□□□□ 0.52
CCHCR1-222ENST00000507459 ANKRD13DQ6ZTN6 518 aa18.27■□□□□ 0.52
CCHCR1-222ENST00000507459 WDR63Q8IWG1 891 aa18.27■□□□□ 0.52
CCHCR1-222ENST00000507459 ZNF428Q96B54 188 aa18.27■□□□□ 0.52
CCHCR1-222ENST00000507459 DLEC1Q9Y238 1755 aa18.27■□□□□ 0.51
CCHCR1-222ENST00000507459 TCERG1O14776 1098 aaKnown RBP18.26■□□□□ 0.51
CCHCR1-222ENST00000507459 C21orf2O43822 256 aa18.26■□□□□ 0.51
CCHCR1-222ENST00000507459 TCIRG1Q13488 830 aa18.26■□□□□ 0.51
CCHCR1-222ENST00000507459 PARP10Q53GL7 1025 aa18.26■□□□□ 0.51
CCHCR1-222ENST00000507459 CCDC30Q5VVM6 783 aa18.26■□□□□ 0.51
CCHCR1-222ENST00000507459 STYK1Q6J9G0 422 aa18.26■□□□□ 0.51
CCHCR1-222ENST00000507459 PPP1R42Q7Z4L9 355 aa18.26■□□□□ 0.51
CCHCR1-222ENST00000507459 PLBD2Q8NHP8 589 aa18.26■□□□□ 0.51
CCHCR1-222ENST00000507459 ZNF526Q8TF50 670 aaPredicted RBP18.26■□□□□ 0.51
CCHCR1-222ENST00000507459 CNKSR1Q969H4 720 aa18.26■□□□□ 0.51
CCHCR1-222ENST00000507459 PHAXQ9H814 394 aaKnown RBP18.26■□□□□ 0.51
CCHCR1-222ENST00000507459 ABCC12Q96J65 1359 aa18.26■□□□□ 0.51
CCHCR1-222ENST00000507459 COL11A2P13942 1736 aaPredicted RBP18.26■□□□□ 0.51
CCHCR1-222ENST00000507459 NTSR2O95665 410 aa18.25■□□□□ 0.51
CCHCR1-222ENST00000507459 C9orf131Q5VYM1 1079 aa18.25■□□□□ 0.51
CCHCR1-222ENST00000507459 UTP14AQ9BVJ6 771 aaKnown RBP18.25■□□□□ 0.51
CCHCR1-222ENST00000507459 FANCIQ9NVI1 1328 aa18.24■□□□□ 0.51
CCHCR1-222ENST00000507459 KLRG2A4D1S0 409 aaPredicted RBP18.24■□□□□ 0.51
CCHCR1-222ENST00000507459 NPR1P16066 1061 aa18.24■□□□□ 0.51
CCHCR1-222ENST00000507459 RASSF7Q02833 373 aa18.24■□□□□ 0.51
CCHCR1-222ENST00000507459 TWISTNBQ3B726 338 aaPredicted RBP18.24■□□□□ 0.51
CCHCR1-222ENST00000507459 PRPF40BQ6NWY9 871 aaKnown RBP18.24■□□□□ 0.51
CCHCR1-222ENST00000507459 CHMP4AQ9BY43 222 aa18.24■□□□□ 0.51
CCHCR1-222ENST00000507459 IBTKQ9P2D0 1353 aaPredicted RBP18.23■□□□□ 0.51
CCHCR1-222ENST00000507459 ATP5J2-PTCD1G3V325 749 aa18.23■□□□□ 0.51
CCHCR1-222ENST00000507459 RIC3Q7Z5B4 369 aa18.23■□□□□ 0.51
CCHCR1-222ENST00000507459 NLRP10Q86W26 655 aa18.23■□□□□ 0.51
CCHCR1-222ENST00000507459 ADCY9O60503 1353 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms