RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 BICDL1Q6ZP65 573 aa23.66■■□□□ 1.38
PDLIM7-216ENST00000506537 TSPYL6Q8N831 410 aa23.66■■□□□ 1.38
PDLIM7-216ENST00000506537 CHPF2Q9P2E5 772 aa23.66■■□□□ 1.38
PDLIM7-216ENST00000506537 GOLGB1Q14789 3259 aaKnown RBP23.65■■□□□ 1.38
PDLIM7-216ENST00000506537 HLFQ16534 295 aa23.65■■□□□ 1.38
PDLIM7-216ENST00000506537 MAP3K15Q6ZN16 1313 aa23.64■■□□□ 1.38
PDLIM7-216ENST00000506537 DDX21Q9NR30 783 aaKnown RBP eCLIP23.64■■□□□ 1.37
PDLIM7-216ENST00000506537 NUP98P52948 1817 aa23.63■■□□□ 1.37
PDLIM7-216ENST00000506537 PXDNLA1KZ92 1463 aa23.63■■□□□ 1.37
PDLIM7-216ENST00000506537 DCAF8L1A6NGE4 600 aa23.63■■□□□ 1.37
PDLIM7-216ENST00000506537 RGL2O15211 777 aa23.63■■□□□ 1.37
PDLIM7-216ENST00000506537 CLEC4GQ6UXB4 293 aa23.63■■□□□ 1.37
PDLIM7-216ENST00000506537 CARMIL3Q8ND23 1372 aa23.63■■□□□ 1.37
PDLIM7-216ENST00000506537 SERPINB2P05120 415 aa23.62■■□□□ 1.37
PDLIM7-216ENST00000506537 KIF6Q6ZMV9 814 aa23.62■■□□□ 1.37
PDLIM7-216ENST00000506537 N4BP2Q86UW6 1770 aaPredicted RBP23.62■■□□□ 1.37
PDLIM7-216ENST00000506537 ERVV-1B6SEH8 477 aa23.61■■□□□ 1.37
PDLIM7-216ENST00000506537 XAGE3Q8WTP9 111 aa23.61■■□□□ 1.37
PDLIM7-216ENST00000506537 ZBTB3Q9H5J0 574 aa23.61■■□□□ 1.37
PDLIM7-216ENST00000506537 ZNF652Q9Y2D9 606 aa23.61■■□□□ 1.37
PDLIM7-216ENST00000506537 COPS6Q7L5N1 327 aa23.6■■□□□ 1.37
PDLIM7-216ENST00000506537 DBF4Q9UBU7 674 aaPredicted RBP23.6■■□□□ 1.37
PDLIM7-216ENST00000506537 ATP10DQ9P241 1426 aa23.59■■□□□ 1.37
PDLIM7-216ENST00000506537 UTRNP46939 3433 aa23.59■■□□□ 1.37
PDLIM7-216ENST00000506537 SETDB2Q96T68 719 aa23.59■■□□□ 1.37
PDLIM7-216ENST00000506537 ANKRD31Q8N7Z5 1873 aa23.58■■□□□ 1.37
PDLIM7-216ENST00000506537 AIMP1Q12904 312 aaKnown RBP23.58■■□□□ 1.37
PDLIM7-216ENST00000506537 TWISTNBQ3B726 338 aaPredicted RBP23.58■■□□□ 1.37
PDLIM7-216ENST00000506537 EXOSC9Q06265 439 aaKnown RBP23.57■■□□□ 1.36
PDLIM7-216ENST00000506537 PRR5LQ6MZQ0 368 aa23.57■■□□□ 1.36
PDLIM7-216ENST00000506537 MYH16Q9H6N6 1097 aa23.57■■□□□ 1.36
PDLIM7-216ENST00000506537 NIP7Q9Y221 180 aaKnown RBP eCLIP23.57■■□□□ 1.36
PDLIM7-216ENST00000506537 BRCA1P38398 1863 aaKnown RBP23.56■■□□□ 1.36
PDLIM7-216ENST00000506537 ANKRD36CQ5JPF3 1778 aa23.56■■□□□ 1.36
PDLIM7-216ENST00000506537 TGFB2P61812 414 aa23.56■■□□□ 1.36
PDLIM7-216ENST00000506537 GOLGA2Q08379 1002 aa23.56■■□□□ 1.36
PDLIM7-216ENST00000506537 GIGYF2Q6Y7W6 1299 aaKnown RBP23.56■■□□□ 1.36
PDLIM7-216ENST00000506537 HYPKQ9NX55 129 aa23.56■■□□□ 1.36
PDLIM7-216ENST00000506537 CCDC24Q8N4L8 307 aa23.55■■□□□ 1.36
PDLIM7-216ENST00000506537 UBN2Q6ZU65 1347 aa23.55■■□□□ 1.36
PDLIM7-216ENST00000506537 A0A0G2JLW4 131 aa23.54■■□□□ 1.36
PDLIM7-216ENST00000506537 DPEP1P16444 411 aa23.54■■□□□ 1.36
PDLIM7-216ENST00000506537 YBX3P16989 372 aaKnown RBP eCLIP23.54■■□□□ 1.36
PDLIM7-216ENST00000506537 CCDC30Q5VVM6 783 aa23.54■■□□□ 1.36
PDLIM7-216ENST00000506537 PHAXQ9H814 394 aaKnown RBP23.54■■□□□ 1.36
PDLIM7-216ENST00000506537 WWC3Q9ULE0 1092 aa23.54■■□□□ 1.36
PDLIM7-216ENST00000506537 COL11A2P13942 1736 aaPredicted RBP23.53■■□□□ 1.36
PDLIM7-216ENST00000506537 ARFGEF2Q9Y6D5 1785 aa23.53■■□□□ 1.36
PDLIM7-216ENST00000506537 TCERG1O14776 1098 aaKnown RBP23.53■■□□□ 1.36
PDLIM7-216ENST00000506537 KCNA3P22001 575 aa23.53■■□□□ 1.36
PDLIM7-216ENST00000506537 GPTP24298 496 aa23.53■■□□□ 1.36
PDLIM7-216ENST00000506537 ZNF34Q8IZ26 560 aa23.53■■□□□ 1.36
PDLIM7-216ENST00000506537 CNBD1Q8NA66 436 aa23.53■■□□□ 1.36
PDLIM7-216ENST00000506537 DLEC1Q9Y238 1755 aa23.52■■□□□ 1.36
PDLIM7-216ENST00000506537 VAMP4O75379 141 aa23.52■■□□□ 1.36
PDLIM7-216ENST00000506537 CHRNA5P30532 468 aa23.52■■□□□ 1.36
PDLIM7-216ENST00000506537 NBPF5PQ86XG9 351 aaPredicted RBP23.52■■□□□ 1.36
PDLIM7-216ENST00000506537 PELP1Q8IZL8 1130 aaKnown RBP23.52■■□□□ 1.36
PDLIM7-216ENST00000506537 FAM177BA6PVY3 158 aa23.51■■□□□ 1.35
PDLIM7-216ENST00000506537 GPR162Q16538 588 aa23.51■■□□□ 1.35
PDLIM7-216ENST00000506537 CDCA7LQ96GN5 454 aa23.51■■□□□ 1.35
PDLIM7-216ENST00000506537 E9PSI1 815 aa23.5■■□□□ 1.35
PDLIM7-216ENST00000506537 SLFN5Q08AF3 891 aa23.5■■□□□ 1.35
PDLIM7-216ENST00000506537 PLBD2Q8NHP8 589 aa23.5■■□□□ 1.35
PDLIM7-216ENST00000506537 TNRC6CQ9HCJ0 1690 aaKnown RBP23.49■■□□□ 1.35
PDLIM7-216ENST00000506537 ANKRD13DQ6ZTN6 518 aa23.49■■□□□ 1.35
PDLIM7-216ENST00000506537 CHMP4AQ9BY43 222 aa23.49■■□□□ 1.35
PDLIM7-216ENST00000506537 IBTKQ9P2D0 1353 aaPredicted RBP23.49■■□□□ 1.35
PDLIM7-216ENST00000506537 ST5P78524 1137 aa23.48■■□□□ 1.35
PDLIM7-216ENST00000506537 SUSD4Q5VX71 490 aa23.48■■□□□ 1.35
PDLIM7-216ENST00000506537 BRIP1Q9BX63 1249 aa23.48■■□□□ 1.35
PDLIM7-216ENST00000506537 ABCC12Q96J65 1359 aa23.48■■□□□ 1.35
PDLIM7-216ENST00000506537 NTSR2O95665 410 aa23.47■■□□□ 1.35
PDLIM7-216ENST00000506537 TCIRG1Q13488 830 aa23.47■■□□□ 1.35
PDLIM7-216ENST00000506537 G2E3Q7L622 706 aa23.47■■□□□ 1.35
PDLIM7-216ENST00000506537 STK31Q9BXU1 1019 aa23.47■■□□□ 1.35
PDLIM7-216ENST00000506537 NPHP1O15259 732 aa23.46■■□□□ 1.35
PDLIM7-216ENST00000506537 HSP90AB3PQ58FF7 597 aa23.46■■□□□ 1.35
PDLIM7-216ENST00000506537 TPTE2Q6XPS3 522 aa23.46■■□□□ 1.35
PDLIM7-216ENST00000506537 NUTM1Q86Y26 1132 aa23.46■■□□□ 1.35
PDLIM7-216ENST00000506537 TRMT2AQ8IZ69 625 aaKnown RBP23.46■■□□□ 1.35
PDLIM7-216ENST00000506537 SLC4A2P04920 1241 aa23.45■■□□□ 1.34
PDLIM7-216ENST00000506537 PARP10Q53GL7 1025 aa23.45■■□□□ 1.34
PDLIM7-216ENST00000506537 C2CD5Q86YS7 1000 aa23.45■■□□□ 1.34
PDLIM7-216ENST00000506537 ERFEQ4G0M1 354 aa23.44■■□□□ 1.34
PDLIM7-216ENST00000506537 NLRP10Q86W26 655 aa23.44■■□□□ 1.34
PDLIM7-216ENST00000506537 NYXQ9GZU5 481 aa23.44■■□□□ 1.34
PDLIM7-216ENST00000506537 ARFGEF1Q9Y6D6 1849 aa23.44■■□□□ 1.34
PDLIM7-216ENST00000506537 CACNA1FO60840 1977 aa23.43■■□□□ 1.34
PDLIM7-216ENST00000506537 ADCY9O60503 1353 aa23.43■■□□□ 1.34
PDLIM7-216ENST00000506537 PDE6BP35913 854 aa23.43■■□□□ 1.34
PDLIM7-216ENST00000506537 HNRNPUQ00839 825 aaKnown RBP eCLIP23.43■■□□□ 1.34
PDLIM7-216ENST00000506537 RIC3Q7Z5B4 369 aa23.43■■□□□ 1.34
PDLIM7-216ENST00000506537 ISCA1Q9BUE6 129 aa23.43■■□□□ 1.34
PDLIM7-216ENST00000506537 PIM2Q9P1W9 311 aa23.43■■□□□ 1.34
PDLIM7-216ENST00000506537 BCS1LQ9Y276 419 aa23.43■■□□□ 1.34
PDLIM7-216ENST00000506537 RIC1Q4ADV7 1423 aa23.42■■□□□ 1.34
PDLIM7-216ENST00000506537 KLRG2A4D1S0 409 aaPredicted RBP23.41■■□□□ 1.34
PDLIM7-216ENST00000506537 ATP5J2-PTCD1G3V325 749 aa23.41■■□□□ 1.34
PDLIM7-216ENST00000506537 H0YIN7 160 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms